RNA–Protein interactions for RNA: ENST00000464469.2

ZNF28-205, Transcript of zinc finger protein 28, humanhuman

TSL 1 (best)

Gene ZNF28, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-205ENST00000464469 PCDH10Q9P2E7 1040 aa9.3□□□□□ -0.92
ZNF28-205ENST00000464469 TTBK1Q5TCY1 1321 aaPredicted RBP9.3□□□□□ -0.92
ZNF28-205ENST00000464469 ATP1B4Q9UN42 357 aaPredicted RBP9.29□□□□□ -0.92
ZNF28-205ENST00000464469 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
ZNF28-205ENST00000464469 PTPRGP23470 1445 aa9.28□□□□□ -0.92
ZNF28-205ENST00000464469 ABCA8O94911 1581 aa9.28□□□□□ -0.92
ZNF28-205ENST00000464469 ABCC2Q92887 1545 aa9.26□□□□□ -0.93
ZNF28-205ENST00000464469 NUP153P49790 1475 aaKnown RBP9.26□□□□□ -0.93
ZNF28-205ENST00000464469 ARID4BQ4LE39 1312 aaPredicted RBP9.26□□□□□ -0.93
ZNF28-205ENST00000464469 TTC37Q6PGP7 1564 aa9.25□□□□□ -0.93
ZNF28-205ENST00000464469 PPARGC1BQ86YN6 1023 aaKnown RBP9.25□□□□□ -0.93
ZNF28-205ENST00000464469 CDK13Q14004 1512 aaKnown RBP9.25□□□□□ -0.93
ZNF28-205ENST00000464469 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
ZNF28-205ENST00000464469 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
ZNF28-205ENST00000464469 EHBP1L1Q8N3D4 1523 aa9.24□□□□□ -0.93
ZNF28-205ENST00000464469 ZNF335Q9H4Z2 1342 aaPredicted RBP9.24□□□□□ -0.93
ZNF28-205ENST00000464469 UACAQ9BZF9 1416 aa9.23□□□□□ -0.93
ZNF28-205ENST00000464469 MTUS2Q5JR59 1369 aa9.23□□□□□ -0.93
ZNF28-205ENST00000464469 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
ZNF28-205ENST00000464469 MAGI3Q5TCQ9 1506 aa9.21□□□□□ -0.93
ZNF28-205ENST00000464469 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
ZNF28-205ENST00000464469 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.94
ZNF28-205ENST00000464469 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
ZNF28-205ENST00000464469 CEP350Q5VT06 3117 aa9.2□□□□□ -0.94
ZNF28-205ENST00000464469 TOM1O60784 492 aa9.2□□□□□ -0.94
ZNF28-205ENST00000464469 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
ZNF28-205ENST00000464469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
ZNF28-205ENST00000464469 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
ZNF28-205ENST00000464469 HNRNPUL2Q1KMD3 747 aaKnown RBP9.19□□□□□ -0.94
ZNF28-205ENST00000464469 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
ZNF28-205ENST00000464469 UHRF1BP1Q6BDS2 1440 aa9.19□□□□□ -0.94
ZNF28-205ENST00000464469 ARAP3Q8WWN8 1544 aa9.19□□□□□ -0.94
ZNF28-205ENST00000464469 ZCCHC11Q5TAX3 1644 aaKnown RBP9.19□□□□□ -0.94
ZNF28-205ENST00000464469 ATP10BO94823 1461 aa9.18□□□□□ -0.94
ZNF28-205ENST00000464469 ALKQ9UM73 1620 aa9.18□□□□□ -0.94
ZNF28-205ENST00000464469 YY1P25490 414 aa9.17□□□□□ -0.94
ZNF28-205ENST00000464469 LRP5O75197 1615 aa9.16□□□□□ -0.94
ZNF28-205ENST00000464469 KIF14Q15058 1648 aa9.16□□□□□ -0.94
ZNF28-205ENST00000464469 KDM5BQ9UGL1 1544 aa9.16□□□□□ -0.94
ZNF28-205ENST00000464469 TROQ12816 1431 aaPredicted RBP9.16□□□□□ -0.94
ZNF28-205ENST00000464469 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
ZNF28-205ENST00000464469 NCOA2Q15596 1464 aa9.15□□□□□ -0.94
ZNF28-205ENST00000464469 SENP3Q9H4L4 574 aaPredicted RBP9.15□□□□□ -0.94
ZNF28-205ENST00000464469 ZRANB1Q9UGI0 708 aa9.15□□□□□ -0.94
ZNF28-205ENST00000464469 ITSN2Q9NZM3 1697 aa9.14□□□□□ -0.95
ZNF28-205ENST00000464469 PLEKHD1A6NEE1 506 aa9.13□□□□□ -0.95
ZNF28-205ENST00000464469 PCGF6Q9BYE7 350 aa9.13□□□□□ -0.95
ZNF28-205ENST00000464469 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
ZNF28-205ENST00000464469 ARHGEF40Q8TER5 1519 aa9.12□□□□□ -0.95
ZNF28-205ENST00000464469 MYOM3Q5VTT5 1437 aa9.12□□□□□ -0.95
ZNF28-205ENST00000464469 CD109Q6YHK3 1445 aa9.12□□□□□ -0.95
ZNF28-205ENST00000464469 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
ZNF28-205ENST00000464469 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
ZNF28-205ENST00000464469 SIGLEC1Q9BZZ2 1709 aa9.11□□□□□ -0.95
ZNF28-205ENST00000464469 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
ZNF28-205ENST00000464469 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
ZNF28-205ENST00000464469 CDC42BPAQ5VT25 1732 aa9.1□□□□□ -0.95
ZNF28-205ENST00000464469 PTPN23Q9H3S7 1636 aa9.09□□□□□ -0.95
ZNF28-205ENST00000464469 WDR7Q9Y4E6 1490 aa9.09□□□□□ -0.95
ZNF28-205ENST00000464469 MYO5CQ9NQX4 1742 aa9.09□□□□□ -0.95
ZNF28-205ENST00000464469 POGZQ7Z3K3 1410 aa9.09□□□□□ -0.95
ZNF28-205ENST00000464469 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
ZNF28-205ENST00000464469 FRMPD1Q5SYB0 1578 aa9.08□□□□□ -0.96
ZNF28-205ENST00000464469 PREX2Q70Z35 1606 aa9.08□□□□□ -0.96
ZNF28-205ENST00000464469 FANCAO15360 1455 aa9.08□□□□□ -0.96
ZNF28-205ENST00000464469 MIA2Q96PC5 1412 aa9.07□□□□□ -0.96
ZNF28-205ENST00000464469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.07□□□□□ -0.96
ZNF28-205ENST00000464469 PTPRKQ15262 1439 aa9.06□□□□□ -0.96
ZNF28-205ENST00000464469 FOXD1Q16676 465 aa9.06□□□□□ -0.96
ZNF28-205ENST00000464469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.06□□□□□ -0.96
ZNF28-205ENST00000464469 GPATCH8Q9UKJ3 1502 aaKnown RBP9.05□□□□□ -0.96
ZNF28-205ENST00000464469 ABCA9Q8IUA7 1624 aa9.05□□□□□ -0.96
ZNF28-205ENST00000464469 CDC42BPBQ9Y5S2 1711 aa9.05□□□□□ -0.96
ZNF28-205ENST00000464469 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
ZNF28-205ENST00000464469 CEBPAP49715 358 aaPredicted RBP9.05□□□□□ -0.96
ZNF28-205ENST00000464469 FAM50AQ14320 339 aaKnown RBP9.05□□□□□ -0.96
ZNF28-205ENST00000464469 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
ZNF28-205ENST00000464469 CAMSAP1Q5T5Y3 1602 aa9.03□□□□□ -0.96
ZNF28-205ENST00000464469 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
ZNF28-205ENST00000464469 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
ZNF28-205ENST00000464469 ARHGAP5Q13017 1502 aa9.03□□□□□ -0.96
ZNF28-205ENST00000464469 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.96
ZNF28-205ENST00000464469 CPS1P31327 1500 aa9.02□□□□□ -0.97
ZNF28-205ENST00000464469 CFDP1Q9UEE9 299 aaPredicted RBP9.02□□□□□ -0.97
ZNF28-205ENST00000464469 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.97
ZNF28-205ENST00000464469 ARHGEF12Q9NZN5 1544 aa9.01□□□□□ -0.97
ZNF28-205ENST00000464469 CROCC2H7BZ55 1655 aa9.01□□□□□ -0.97
ZNF28-205ENST00000464469 SAMD9LQ8IVG5 1584 aa9□□□□□ -0.97
ZNF28-205ENST00000464469 CFAP74Q9C0B2 1584 aa9□□□□□ -0.97
ZNF28-205ENST00000464469 ITGAEP38570 1179 aa9□□□□□ -0.97
ZNF28-205ENST00000464469 PLCH2O75038 1416 aa8.99□□□□□ -0.97
ZNF28-205ENST00000464469 MLECQ14165 292 aa8.99□□□□□ -0.97
ZNF28-205ENST00000464469 ZNF777Q9ULD5 760 aaPredicted RBP8.99□□□□□ -0.97
ZNF28-205ENST00000464469 PLEKHH2Q8IVE3 1493 aa8.99□□□□□ -0.97
ZNF28-205ENST00000464469 ADGBQ8N7X0 1667 aa8.99□□□□□ -0.97
ZNF28-205ENST00000464469 CDK12Q9NYV4 1490 aaPredicted RBP8.98□□□□□ -0.97
ZNF28-205ENST00000464469 C1QTNF8P60827 252 aa8.98□□□□□ -0.97
ZNF28-205ENST00000464469 ARHGEF5Q12774 1597 aa8.98□□□□□ -0.97
ZNF28-205ENST00000464469 DAPK1P53355 1430 aa8.97□□□□□ -0.97
ZNF28-205ENST00000464469 SYCP2Q9BX26 1530 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms