RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCNL1-204ENST00000464316 CNTLNQ9NXG0 1405 aa5.1□□□□□ -1.59
CCNL1-204ENST00000464316 BACH2Q9BYV9 841 aa5.09□□□□□ -1.59
CCNL1-204ENST00000464316 ARHGAP35Q9NRY4 1499 aa5.09□□□□□ -1.59
CCNL1-204ENST00000464316 PDE3BQ13370 1112 aa5.09□□□□□ -1.6
CCNL1-204ENST00000464316 POLR3GLQ9BT43 218 aa5.09□□□□□ -1.6
CCNL1-204ENST00000464316 BRPF3Q9ULD4 1205 aa5.09□□□□□ -1.6
CCNL1-204ENST00000464316 UACAQ9BZF9 1416 aa5.09□□□□□ -1.6
CCNL1-204ENST00000464316 NFKBIBQ15653 356 aa5.08□□□□□ -1.6
CCNL1-204ENST00000464316 CFAP43Q8NDM7 1665 aa5.08□□□□□ -1.6
CCNL1-204ENST00000464316 LRRC9Q6ZRR7 1453 aa5.08□□□□□ -1.6
CCNL1-204ENST00000464316 BECN1Q14457 450 aa5.08□□□□□ -1.6
CCNL1-204ENST00000464316 CEP170Q5SW79 1584 aa5.07□□□□□ -1.6
CCNL1-204ENST00000464316 CCDC7Q96M83 1385 aa5.07□□□□□ -1.6
CCNL1-204ENST00000464316 RNF123Q5XPI4 1314 aa5.07□□□□□ -1.6
CCNL1-204ENST00000464316 FMN1Q68DA7 1419 aa5.07□□□□□ -1.6
CCNL1-204ENST00000464316 HSP90AA1P07900 732 aaKnown RBP5.07□□□□□ -1.6
CCNL1-204ENST00000464316 RCAN3Q9UKA8 241 aa5.07□□□□□ -1.6
CCNL1-204ENST00000464316 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-204ENST00000464316 FRAT1Q92837 279 aaPredicted RBP5.07□□□□□ -1.6
CCNL1-204ENST00000464316 MAP3K4Q9Y6R4 1608 aa5.06□□□□□ -1.6
CCNL1-204ENST00000464316 RRP1P56182 461 aaKnown RBP5.06□□□□□ -1.6
CCNL1-204ENST00000464316 HSP90AA2PQ14568 343 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-204ENST00000464316 PNNQ9H307 717 aaKnown RBP5.06□□□□□ -1.6
CCNL1-204ENST00000464316 PHLDB1Q86UU1 1377 aa5.06□□□□□ -1.6
CCNL1-204ENST00000464316 NAP1L5Q96NT1 182 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-204ENST00000464316 MTUS2Q5JR59 1369 aa5.06□□□□□ -1.6
CCNL1-204ENST00000464316 GLI2P10070 1586 aa5.06□□□□□ -1.6
CCNL1-204ENST00000464316 CCDC18Q5T9S5 1454 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 CADPSQ9ULU8 1353 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 CNGB1Q14028 1251 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-204ENST00000464316 VSIG10Q8N0Z9 540 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 UGGT2Q9NYU1 1516 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 ARID4BQ4LE39 1312 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-204ENST00000464316 NUP160Q12769 1436 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 TIAM1Q13009 1591 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 ROCK2O75116 1388 aaKnown RBP5.05□□□□□ -1.6
CCNL1-204ENST00000464316 ARHGEF11O15085 1522 aa5.05□□□□□ -1.6
CCNL1-204ENST00000464316 RRP9O43818 475 aaKnown RBP5.05□□□□□ -1.6
CCNL1-204ENST00000464316 UPF2Q9HAU5 1272 aaKnown RBP5.05□□□□□ -1.6
CCNL1-204ENST00000464316 CCDC184Q52MB2 194 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 AKNAQ7Z591 1439 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 IFT140Q96RY7 1462 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 RALBP1Q15311 655 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 EXOC6Q8TAG9 804 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 HFM1A2PYH4 1435 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 FAM161AQ3B820 660 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 P3H3Q8IVL6 736 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 L3MBTL2Q969R5 705 aa5.04□□□□□ -1.6
CCNL1-204ENST00000464316 CARMIL1Q5VZK9 1371 aa5.03□□□□□ -1.6
CCNL1-204ENST00000464316 KTN1Q86UP2 1357 aaKnown RBP5.03□□□□□ -1.6
CCNL1-204ENST00000464316 NCOA2Q15596 1464 aa5.03□□□□□ -1.6
CCNL1-204ENST00000464316 CENPQQ7L2Z9 268 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-204ENST00000464316 NCOA1Q15788 1441 aa5.03□□□□□ -1.6
CCNL1-204ENST00000464316 CROCC2H7BZ55 1655 aa5.02□□□□□ -1.61
CCNL1-204ENST00000464316 MAGI1Q96QZ7 1491 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-204ENST00000464316 KIF7Q2M1P5 1343 aa5.02□□□□□ -1.61
CCNL1-204ENST00000464316 POLA1P09884 1462 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-204ENST00000464316 IQGAP2Q13576 1575 aa5.02□□□□□ -1.61
CCNL1-204ENST00000464316 PNISRQ8TF01 805 aaKnown RBP5.02□□□□□ -1.61
CCNL1-204ENST00000464316 ANP32BQ92688 251 aaKnown RBP5.02□□□□□ -1.61
CCNL1-204ENST00000464316 TRIM44Q96DX7 344 aaPredicted RBP5.02□□□□□ -1.61
CCNL1-204ENST00000464316 MPHOSPH9Q99550 1183 aa5.02□□□□□ -1.61
CCNL1-204ENST00000464316 FGD6Q6ZV73 1430 aa5.02□□□□□ -1.61
CCNL1-204ENST00000464316 GOLGA6L3A6NEY3 463 aa5.01□□□□□ -1.61
CCNL1-204ENST00000464316 RRP7BPQ9NSQ0 103 aa5.01□□□□□ -1.61
CCNL1-204ENST00000464316 PABPN1Q86U42 306 aaKnown RBP eCLIP5.01□□□□□ -1.618e-6■□□□□ 8.9
CCNL1-204ENST00000464316 ZMYND15Q9H091 742 aa5.01□□□□□ -1.61
CCNL1-204ENST00000464316 DNAJC5BQ9UF47 199 aa5.01□□□□□ -1.61
CCNL1-204ENST00000464316 ABCA8O94911 1581 aa5.01□□□□□ -1.61
CCNL1-204ENST00000464316 FANCD2Q9BXW9 1451 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 BRD4O60885 1362 aaPredicted RBP5□□□□□ -1.61
CCNL1-204ENST00000464316 KIF15Q9NS87 1388 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 MYBBP1AQ9BQG0 1328 aaKnown RBP5□□□□□ -1.61
CCNL1-204ENST00000464316 REREQ9P2R6 1566 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 FRAT2O75474 233 aaPredicted RBP5□□□□□ -1.61
CCNL1-204ENST00000464316 UHRF1BP1LA0JNW5 1464 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 NLRP13Q86W25 1043 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 SLC4A1APQ9BWU0 796 aaKnown RBP5□□□□□ -1.61
CCNL1-204ENST00000464316 CHIC2Q9UKJ5 165 aa5□□□□□ -1.61
CCNL1-204ENST00000464316 SLC4A3P48751 1232 aa4.99□□□□□ -1.61
CCNL1-204ENST00000464316 ZNF326Q5BKZ1 582 aaKnown RBP4.99□□□□□ -1.61
CCNL1-204ENST00000464316 ISY1Q9ULR0 285 aaKnown RBP4.99□□□□□ -1.61
CCNL1-204ENST00000464316 IGF1RP08069 1367 aa4.99□□□□□ -1.61
CCNL1-204ENST00000464316 ARAP3Q8WWN8 1544 aa4.99□□□□□ -1.61
CCNL1-204ENST00000464316 CASKIN1Q8WXD9 1431 aa4.99□□□□□ -1.61
CCNL1-204ENST00000464316 MYH16Q9H6N6 1097 aa4.99□□□□□ -1.61
CCNL1-204ENST00000464316 NAIPQ13075 1403 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 MIA2Q96PC5 1412 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 TPM2P07951 284 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 FYCO1Q9BQS8 1478 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 NCLP19338 710 aaKnown RBP4.98□□□□□ -1.61
CCNL1-204ENST00000464316 CLCN1P35523 988 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 ABCA9Q8IUA7 1624 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 PTMSP20962 102 aa4.98□□□□□ -1.61
CCNL1-204ENST00000464316 RGS3P49796 1198 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 MRE11P49959 708 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 CRBNQ96SW2 442 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 MAP7D2Q96T17 732 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 AQRO60306 1485 aaKnown RBP eCLIP4.97□□□□□ -1.615e-8■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms