RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CFDP1Q9UEE9 299 aaPredicted RBP31.67■■■□□ 2.66
PDLIM2-216ENST00000464275 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
PDLIM2-216ENST00000464275 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
PDLIM2-216ENST00000464275 RRP7BPQ9NSQ0 103 aa31.65■■■□□ 2.66
PDLIM2-216ENST00000464275 ZNF644Q9H582 1327 aaPredicted RBP31.64■■■□□ 2.66
PDLIM2-216ENST00000464275 DIEXFQ68CQ4 756 aaKnown RBP31.62■■■□□ 2.65
PDLIM2-216ENST00000464275 KDM6BO15054 1643 aa31.6■■■□□ 2.65
PDLIM2-216ENST00000464275 ACIN1Q9UKV3 1341 aaKnown RBP31.57■■■□□ 2.64
PDLIM2-216ENST00000464275 TIMELESSQ9UNS1 1208 aa31.56■■■□□ 2.64
PDLIM2-216ENST00000464275 UHRF1BP1LA0JNW5 1464 aa31.56■■■□□ 2.64
PDLIM2-216ENST00000464275 PREX2Q70Z35 1606 aa31.54■■■□□ 2.64
PDLIM2-216ENST00000464275 SIN3AQ96ST3 1273 aa31.54■■■□□ 2.64
PDLIM2-216ENST00000464275 CDC42BPBQ9Y5S2 1711 aa31.54■■■□□ 2.64
PDLIM2-216ENST00000464275 ZCCHC11Q5TAX3 1644 aaKnown RBP31.51■■■□□ 2.63
PDLIM2-216ENST00000464275 ZNF777Q9ULD5 760 aaPredicted RBP31.5■■■□□ 2.63
PDLIM2-216ENST00000464275 ADGRL2O95490 1459 aa31.5■■■□□ 2.63
PDLIM2-216ENST00000464275 NEUROD1Q13562 356 aa31.48■■■□□ 2.63
PDLIM2-216ENST00000464275 MYO5CQ9NQX4 1742 aa31.44■■■□□ 2.62
PDLIM2-216ENST00000464275 ARHGEF5Q12774 1597 aa31.44■■■□□ 2.62
PDLIM2-216ENST00000464275 KDM5BQ9UGL1 1544 aa31.44■■■□□ 2.62
PDLIM2-216ENST00000464275 SHANK2Q9UPX8 1470 aa31.44■■■□□ 2.62
PDLIM2-216ENST00000464275 TTC37Q6PGP7 1564 aa31.43■■■□□ 2.62
PDLIM2-216ENST00000464275 TRIM52Q96A61 297 aa31.43■■■□□ 2.62
PDLIM2-216ENST00000464275 NCOA1Q15788 1441 aa31.42■■■□□ 2.62
PDLIM2-216ENST00000464275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.42■■■□□ 2.62
PDLIM2-216ENST00000464275 SAMD9LQ8IVG5 1584 aa31.4■■■□□ 2.62
PDLIM2-216ENST00000464275 DENND4BO75064 1496 aaPredicted RBP31.38■■■□□ 2.61
PDLIM2-216ENST00000464275 ANKRD30AQ9BXX3 1397 aa31.37■■■□□ 2.61
PDLIM2-216ENST00000464275 MPHOSPH9Q99550 1183 aa31.33■■■□□ 2.61
PDLIM2-216ENST00000464275 TONSLQ96HA7 1378 aa31.32■■■□□ 2.6
PDLIM2-216ENST00000464275 C9orf84Q5VXU9 1444 aa31.32■■■□□ 2.6
PDLIM2-216ENST00000464275 MBD5Q9P267 1494 aa31.31■■■□□ 2.6
PDLIM2-216ENST00000464275 ARHGAP5Q13017 1502 aa31.3■■■□□ 2.6
PDLIM2-216ENST00000464275 SCAF1Q9H7N4 1312 aaKnown RBP31.3■■■□□ 2.6
PDLIM2-216ENST00000464275 PPP1R15AO75807 674 aaPredicted RBP31.29■■■□□ 2.6
PDLIM2-216ENST00000464275 CENPBP07199 599 aaPredicted RBP31.29■■■□□ 2.6
PDLIM2-216ENST00000464275 CCDC141Q6ZP82 1450 aa31.28■■■□□ 2.6
PDLIM2-216ENST00000464275 RSPH4AQ5TD94 716 aa31.26■■■□□ 2.6
PDLIM2-216ENST00000464275 TSPY4P0CV99 314 aa31.26■■■□□ 2.59
PDLIM2-216ENST00000464275 TSPY10P0CW01 314 aa31.26■■■□□ 2.59
PDLIM2-216ENST00000464275 OSCARQ8IYS5 282 aa31.26■■■□□ 2.59
PDLIM2-216ENST00000464275 HNRNPMP52272 730 aaKnown RBP eCLIP31.24■■■□□ 2.59
PDLIM2-216ENST00000464275 PLEKHH2Q8IVE3 1493 aa31.23■■■□□ 2.59
PDLIM2-216ENST00000464275 MAST1Q9Y2H9 1570 aa31.22■■■□□ 2.59
PDLIM2-216ENST00000464275 ANKRD50Q9ULJ7 1429 aa31.21■■■□□ 2.59
PDLIM2-216ENST00000464275 SYCP2Q9BX26 1530 aa31.21■■■□□ 2.59
PDLIM2-216ENST00000464275 KCNH8Q96L42 1107 aa31.21■■■□□ 2.59
PDLIM2-216ENST00000464275 PZPP20742 1482 aa31.19■■■□□ 2.58
PDLIM2-216ENST00000464275 PLCH2O75038 1416 aa31.19■■■□□ 2.58
PDLIM2-216ENST00000464275 KIAA1107Q9UPP5 1409 aa31.18■■■□□ 2.58
PDLIM2-216ENST00000464275 SLC4A1APQ9BWU0 796 aaKnown RBP31.15■■■□□ 2.58
PDLIM2-216ENST00000464275 ANKRD30BQ9BXX2 1392 aa31.14■■■□□ 2.58
PDLIM2-216ENST00000464275 ARAP3Q8WWN8 1544 aa31.13■■■□□ 2.57
PDLIM2-216ENST00000464275 WDR7Q9Y4E6 1490 aa31.13■■■□□ 2.57
PDLIM2-216ENST00000464275 KIF15Q9NS87 1388 aa31.12■■■□□ 2.57
PDLIM2-216ENST00000464275 KDM5DQ9BY66 1539 aa31.11■■■□□ 2.57
PDLIM2-216ENST00000464275 PLXNC1O60486 1568 aa31.09■■■□□ 2.57
PDLIM2-216ENST00000464275 RPRD2Q5VT52 1461 aaKnown RBP31.08■■■□□ 2.57
PDLIM2-216ENST00000464275 FOXD1Q16676 465 aa31.07■■■□□ 2.56
PDLIM2-216ENST00000464275 EFCAB2Q5VUJ9 269 aa31.07■■■□□ 2.56
PDLIM2-216ENST00000464275 ABCC1P33527 1531 aa31.07■■■□□ 2.56
PDLIM2-216ENST00000464275 ABCA9Q8IUA7 1624 aa31.06■■■□□ 2.56
PDLIM2-216ENST00000464275 ARHGEF12Q9NZN5 1544 aa31.04■■■□□ 2.56
PDLIM2-216ENST00000464275 PELP1Q8IZL8 1130 aaKnown RBP31.03■■■□□ 2.56
PDLIM2-216ENST00000464275 MIER1Q8N108 512 aa31.03■■■□□ 2.56
PDLIM2-216ENST00000464275 NUP155O75694 1391 aa30.98■■■□□ 2.55
PDLIM2-216ENST00000464275 ASXL2Q76L83 1435 aa30.97■■■□□ 2.55
PDLIM2-216ENST00000464275 UNC13BO14795 1591 aa30.96■■■□□ 2.55
PDLIM2-216ENST00000464275 TEX14Q8IWB6 1497 aa30.94■■■□□ 2.54
PDLIM2-216ENST00000464275 PKD2Q13563 968 aa30.94■■■□□ 2.54
PDLIM2-216ENST00000464275 DUOX2Q9NRD8 1548 aa30.93■■■□□ 2.54
PDLIM2-216ENST00000464275 L3MBTL2Q969R5 705 aa30.91■■■□□ 2.54
PDLIM2-216ENST00000464275 NPM1P06748 294 aaKnown RBP eCLIP30.9■■■□□ 2.54
PDLIM2-216ENST00000464275 TRAPPC8Q9Y2L5 1435 aa30.89■■■□□ 2.53
PDLIM2-216ENST00000464275 FAM135AQ9P2D6 1515 aa30.87■■■□□ 2.53
PDLIM2-216ENST00000464275 FANCAO15360 1455 aa30.86■■■□□ 2.53
PDLIM2-216ENST00000464275 ERBINQ96RT1 1412 aa30.85■■■□□ 2.53
PDLIM2-216ENST00000464275 RTEL1-TNFRSF6BF6WH68 1400 aa30.84■■■□□ 2.53
PDLIM2-216ENST00000464275 IQGAP3Q86VI3 1631 aa30.84■■■□□ 2.53
PDLIM2-216ENST00000464275 ZFYVE16Q7Z3T8 1539 aa30.8■■■□□ 2.52
PDLIM2-216ENST00000464275 MAGI2Q86UL8 1455 aa30.78■■■□□ 2.52
PDLIM2-216ENST00000464275 SPAG9O60271 1321 aaKnown RBP30.77■■■□□ 2.52
PDLIM2-216ENST00000464275 INO80Q9ULG1 1556 aaPredicted RBP30.77■■■□□ 2.52
PDLIM2-216ENST00000464275 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.51
PDLIM2-216ENST00000464275 HIRIP3Q9BW71 556 aaPredicted RBP30.75■■■□□ 2.51
PDLIM2-216ENST00000464275 ADGRL1O94910 1474 aa30.75■■■□□ 2.51
PDLIM2-216ENST00000464275 GTF3C3Q9Y5Q9 886 aa30.74■■■□□ 2.51
PDLIM2-216ENST00000464275 ATP7AQ04656 1500 aa30.72■■■□□ 2.51
PDLIM2-216ENST00000464275 AFAP1Q8N556 730 aa30.7■■■□□ 2.51
PDLIM2-216ENST00000464275 DDX10Q13206 875 aaKnown RBP30.7■■■□□ 2.5
PDLIM2-216ENST00000464275 NBPF8Q3BBV2 869 aa30.7■■■□□ 2.5
PDLIM2-216ENST00000464275 SCAPERQ9BY12 1400 aa30.69■■■□□ 2.5
PDLIM2-216ENST00000464275 EIF4G2P78344 907 aaKnown RBP eCLIP30.67■■■□□ 2.5
PDLIM2-216ENST00000464275 HSPA5P11021 654 aaKnown RBP30.66■■■□□ 2.5
PDLIM2-216ENST00000464275 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
PDLIM2-216ENST00000464275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.5
PDLIM2-216ENST00000464275 CD109Q6YHK3 1445 aa30.64■■■□□ 2.49
PDLIM2-216ENST00000464275 EIF2AK4Q9P2K8 1649 aaKnown RBP30.62■■■□□ 2.49
PDLIM2-216ENST00000464275 POLR1AO95602 1720 aaPredicted RBP30.61■■■□□ 2.49
PDLIM2-216ENST00000464275 RIMBP3CA6NJZ7 1639 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms