RNA–Protein interactions for RNA: ENST00000462877.5

TMCO3-204, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-204ENST00000462877 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
TMCO3-204ENST00000462877 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
TMCO3-204ENST00000462877 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
TMCO3-204ENST00000462877 MAGI2Q86UL8 1455 aa13.72□□□□□ -0.21
TMCO3-204ENST00000462877 SCAPERQ9BY12 1400 aa13.71□□□□□ -0.22
TMCO3-204ENST00000462877 PLEKHD1A6NEE1 506 aa13.7□□□□□ -0.22
TMCO3-204ENST00000462877 KIF14Q15058 1648 aa13.69□□□□□ -0.22
TMCO3-204ENST00000462877 PLCH2O75038 1416 aa13.69□□□□□ -0.22
TMCO3-204ENST00000462877 ATP10AO60312 1499 aa13.68□□□□□ -0.22
TMCO3-204ENST00000462877 LRRIQ1Q96JM4 1722 aa13.68□□□□□ -0.22
TMCO3-204ENST00000462877 SETD1BQ9UPS6 1966 aaKnown RBP13.67□□□□□ -0.22
TMCO3-204ENST00000462877 C9orf84Q5VXU9 1444 aa13.66□□□□□ -0.22
TMCO3-204ENST00000462877 MYO5CQ9NQX4 1742 aa13.66□□□□□ -0.22
TMCO3-204ENST00000462877 LTBP4Q8N2S1 1624 aa13.65□□□□□ -0.22
TMCO3-204ENST00000462877 KDM5CP41229 1560 aa13.65□□□□□ -0.22
TMCO3-204ENST00000462877 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
TMCO3-204ENST00000462877 C3P01024 1663 aa13.65□□□□□ -0.22
TMCO3-204ENST00000462877 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
TMCO3-204ENST00000462877 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
TMCO3-204ENST00000462877 SOCS7O14512 581 aa13.62□□□□□ -0.23
TMCO3-204ENST00000462877 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
TMCO3-204ENST00000462877 FAM9AQ8IZU1 332 aaPredicted RBP13.61□□□□□ -0.23
TMCO3-204ENST00000462877 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
TMCO3-204ENST00000462877 SPATA31D1Q6ZQQ2 1576 aa13.6□□□□□ -0.23
TMCO3-204ENST00000462877 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
TMCO3-204ENST00000462877 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
TMCO3-204ENST00000462877 PTPRTO14522 1441 aa13.57□□□□□ -0.24
TMCO3-204ENST00000462877 UHRF1BP1Q6BDS2 1440 aa13.57□□□□□ -0.24
TMCO3-204ENST00000462877 EEA1Q15075 1411 aa13.56□□□□□ -0.24
TMCO3-204ENST00000462877 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
TMCO3-204ENST00000462877 ZNF518AQ6AHZ1 1483 aa13.56□□□□□ -0.24
TMCO3-204ENST00000462877 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
TMCO3-204ENST00000462877 EFCAB2Q5VUJ9 269 aa13.56□□□□□ -0.24
TMCO3-204ENST00000462877 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
TMCO3-204ENST00000462877 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
TMCO3-204ENST00000462877 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
TMCO3-204ENST00000462877 NCOA1Q15788 1441 aa13.54□□□□□ -0.24
TMCO3-204ENST00000462877 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
TMCO3-204ENST00000462877 AGLP35573 1532 aa13.54□□□□□ -0.24
TMCO3-204ENST00000462877 ABCC1P33527 1531 aa13.53□□□□□ -0.24
TMCO3-204ENST00000462877 PREX2Q70Z35 1606 aa13.52□□□□□ -0.25
TMCO3-204ENST00000462877 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
TMCO3-204ENST00000462877 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
TMCO3-204ENST00000462877 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
TMCO3-204ENST00000462877 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
TMCO3-204ENST00000462877 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
TMCO3-204ENST00000462877 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
TMCO3-204ENST00000462877 ATP1B4Q9UN42 357 aaPredicted RBP13.47□□□□□ -0.25
TMCO3-204ENST00000462877 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
TMCO3-204ENST00000462877 SAMD9LQ8IVG5 1584 aa13.46□□□□□ -0.25
TMCO3-204ENST00000462877 ZNF335Q9H4Z2 1342 aaPredicted RBP13.45□□□□□ -0.26
TMCO3-204ENST00000462877 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
TMCO3-204ENST00000462877 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
TMCO3-204ENST00000462877 SUPT6HQ7KZ85 1726 aaKnown RBP13.44□□□□□ -0.26
TMCO3-204ENST00000462877 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
TMCO3-204ENST00000462877 MYO3AQ8NEV4 1616 aa13.43□□□□□ -0.26
TMCO3-204ENST00000462877 PLXNC1O60486 1568 aa13.42□□□□□ -0.26
TMCO3-204ENST00000462877 NPATQ14207 1427 aa13.42□□□□□ -0.26
TMCO3-204ENST00000462877 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
TMCO3-204ENST00000462877 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
TMCO3-204ENST00000462877 CLIP1P30622 1438 aa13.4□□□□□ -0.26
TMCO3-204ENST00000462877 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
TMCO3-204ENST00000462877 SYCP2Q9BX26 1530 aa13.4□□□□□ -0.26
TMCO3-204ENST00000462877 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
TMCO3-204ENST00000462877 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
TMCO3-204ENST00000462877 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
TMCO3-204ENST00000462877 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
TMCO3-204ENST00000462877 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
TMCO3-204ENST00000462877 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
TMCO3-204ENST00000462877 UBTFP17480 764 aaKnown RBP13.38□□□□□ -0.27
TMCO3-204ENST00000462877 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
TMCO3-204ENST00000462877 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
TMCO3-204ENST00000462877 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
TMCO3-204ENST00000462877 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
TMCO3-204ENST00000462877 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
TMCO3-204ENST00000462877 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
TMCO3-204ENST00000462877 HNRNPMP52272 730 aaKnown RBP eCLIP13.35□□□□□ -0.275e-7■■■■□ 20
TMCO3-204ENST00000462877 MED1Q15648 1581 aaPredicted RBP13.34□□□□□ -0.27
TMCO3-204ENST00000462877 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
TMCO3-204ENST00000462877 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.28
TMCO3-204ENST00000462877 A2MP01023 1474 aa13.32□□□□□ -0.28
TMCO3-204ENST00000462877 HSPA1LP34931 641 aa13.31□□□□□ -0.28
TMCO3-204ENST00000462877 ESF1Q9H501 851 aaKnown RBP13.31□□□□□ -0.28
TMCO3-204ENST00000462877 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
TMCO3-204ENST00000462877 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
TMCO3-204ENST00000462877 ZNF777Q9ULD5 760 aaPredicted RBP13.3□□□□□ -0.28
TMCO3-204ENST00000462877 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
TMCO3-204ENST00000462877 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
TMCO3-204ENST00000462877 PKD2Q13563 968 aa13.29□□□□□ -0.28
TMCO3-204ENST00000462877 ZNF644Q9H582 1327 aaPredicted RBP13.29□□□□□ -0.28
TMCO3-204ENST00000462877 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
TMCO3-204ENST00000462877 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
TMCO3-204ENST00000462877 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
TMCO3-204ENST00000462877 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
TMCO3-204ENST00000462877 MBD5Q9P267 1494 aa13.28□□□□□ -0.28
TMCO3-204ENST00000462877 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
TMCO3-204ENST00000462877 FBXO31Q5XUX0 539 aaPredicted RBP13.26□□□□□ -0.29
TMCO3-204ENST00000462877 GGT6Q6P531 493 aa13.26□□□□□ -0.29
TMCO3-204ENST00000462877 PPP6R1Q9UPN7 881 aa13.26□□□□□ -0.29
TMCO3-204ENST00000462877 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms