RNA–Protein interactions for RNA: ENST00000462496.5

MACF1-210, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-210ENST00000462496 NUP160Q12769 1436 aa7.42□□□□□ -1.22
MACF1-210ENST00000462496 RAPGEF6Q8TEU7 1601 aa7.41□□□□□ -1.22
MACF1-210ENST00000462496 VASPP50552 380 aaPredicted RBP7.4□□□□□ -1.22
MACF1-210ENST00000462496 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
MACF1-210ENST00000462496 MIA2Q96PC5 1412 aa7.4□□□□□ -1.22
MACF1-210ENST00000462496 CDK13Q14004 1512 aaKnown RBP7.4□□□□□ -1.22
MACF1-210ENST00000462496 GCC2Q8IWJ2 1684 aa7.39□□□□□ -1.23
MACF1-210ENST00000462496 NUP153P49790 1475 aaKnown RBP7.39□□□□□ -1.23
MACF1-210ENST00000462496 PTPRKQ15262 1439 aa7.39□□□□□ -1.23
MACF1-210ENST00000462496 AKNAQ7Z591 1439 aa7.39□□□□□ -1.23
MACF1-210ENST00000462496 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
MACF1-210ENST00000462496 ADCY10Q96PN6 1610 aa7.38□□□□□ -1.23
MACF1-210ENST00000462496 NAIPQ13075 1403 aa7.37□□□□□ -1.23
MACF1-210ENST00000462496 CHMP7Q8WUX9 453 aaPredicted RBP7.37□□□□□ -1.23
MACF1-210ENST00000462496 CARMIL2Q6F5E8 1435 aa7.36□□□□□ -1.23
MACF1-210ENST00000462496 UACAQ9BZF9 1416 aa7.36□□□□□ -1.23
MACF1-210ENST00000462496 SPINK5Q9NQ38 1064 aaPredicted RBP7.36□□□□□ -1.23
MACF1-210ENST00000462496 ABCA8O94911 1581 aa7.35□□□□□ -1.23
MACF1-210ENST00000462496 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
MACF1-210ENST00000462496 POLA2Q14181 598 aa7.35□□□□□ -1.23
MACF1-210ENST00000462496 RNF39Q9H2S5 420 aa7.35□□□□□ -1.23
MACF1-210ENST00000462496 DNMT1P26358 1616 aaKnown RBP7.34□□□□□ -1.23
MACF1-210ENST00000462496 ITSN2Q9NZM3 1697 aa7.34□□□□□ -1.23
MACF1-210ENST00000462496 TROQ12816 1431 aaPredicted RBP7.34□□□□□ -1.23
MACF1-210ENST00000462496 ACIN1Q9UKV3 1341 aaKnown RBP7.33□□□□□ -1.24
MACF1-210ENST00000462496 PLCB2Q00722 1185 aa7.33□□□□□ -1.24
MACF1-210ENST00000462496 IFNLR1Q8IU57 520 aaPredicted RBP7.33□□□□□ -1.24
MACF1-210ENST00000462496 JPH4Q96JJ6 628 aa7.33□□□□□ -1.24
MACF1-210ENST00000462496 CDK11AQ9UQ88 783 aaPredicted RBP7.33□□□□□ -1.24
MACF1-210ENST00000462496 ROCK1Q13464 1354 aa7.33□□□□□ -1.24
MACF1-210ENST00000462496 PLB1Q6P1J6 1458 aa7.32□□□□□ -1.24
MACF1-210ENST00000462496 SHROOM2Q13796 1616 aa7.31□□□□□ -1.24
MACF1-210ENST00000462496 CHD1O14646 1710 aa7.31□□□□□ -1.24
MACF1-210ENST00000462496 DAPK1P53355 1430 aa7.31□□□□□ -1.24
MACF1-210ENST00000462496 ZBTB12Q9Y330 459 aaPredicted RBP7.31□□□□□ -1.24
MACF1-210ENST00000462496 KDM6BO15054 1643 aa7.3□□□□□ -1.24
MACF1-210ENST00000462496 ABCC5O15440 1437 aa7.3□□□□□ -1.24
MACF1-210ENST00000462496 PRG4Q92954 1404 aaPredicted RBP7.3□□□□□ -1.24
MACF1-210ENST00000462496 MIER1Q8N108 512 aa7.3□□□□□ -1.24
MACF1-210ENST00000462496 SIN3AQ96ST3 1273 aa7.3□□□□□ -1.24
MACF1-210ENST00000462496 ADGBQ8N7X0 1667 aa7.3□□□□□ -1.24
MACF1-210ENST00000462496 CROCC2H7BZ55 1655 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 GPATCH8Q9UKJ3 1502 aaKnown RBP7.29□□□□□ -1.24
MACF1-210ENST00000462496 PPP1R15AO75807 674 aaPredicted RBP7.29□□□□□ -1.24
MACF1-210ENST00000462496 CAPN15O75808 1086 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 CENPBP07199 599 aaPredicted RBP7.29□□□□□ -1.24
MACF1-210ENST00000462496 C1QBPQ07021 282 aaKnown RBP7.29□□□□□ -1.24
MACF1-210ENST00000462496 KIF14Q15058 1648 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 DENND4BO75064 1496 aaPredicted RBP7.29□□□□□ -1.24
MACF1-210ENST00000462496 ATP10BO94823 1461 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 CAMSAP2Q08AD1 1489 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 ABCC10Q5T3U5 1492 aa7.29□□□□□ -1.24
MACF1-210ENST00000462496 ADGRL2O95490 1459 aa7.28□□□□□ -1.24
MACF1-210ENST00000462496 KDM5BQ9UGL1 1544 aa7.27□□□□□ -1.25
MACF1-210ENST00000462496 CDC42BPAQ5VT25 1732 aa7.27□□□□□ -1.25
MACF1-210ENST00000462496 ARID3CA6NKF2 412 aa7.26□□□□□ -1.25
MACF1-210ENST00000462496 NEUROD1Q13562 356 aa7.26□□□□□ -1.25
MACF1-210ENST00000462496 RRP7BPQ9NSQ0 103 aa7.26□□□□□ -1.25
MACF1-210ENST00000462496 SHANK2Q9UPX8 1470 aa7.25□□□□□ -1.25
MACF1-210ENST00000462496 TONSLQ96HA7 1378 aa7.25□□□□□ -1.25
MACF1-210ENST00000462496 PKD2Q13563 968 aa7.25□□□□□ -1.25
MACF1-210ENST00000462496 CHIC2Q9UKJ5 165 aa7.25□□□□□ -1.25
MACF1-210ENST00000462496 PTPRGP23470 1445 aa7.25□□□□□ -1.25
MACF1-210ENST00000462496 CLASP1Q7Z460 1538 aa7.24□□□□□ -1.25
MACF1-210ENST00000462496 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
MACF1-210ENST00000462496 ARHGEF5Q12774 1597 aa7.24□□□□□ -1.25
MACF1-210ENST00000462496 ZNF644Q9H582 1327 aaPredicted RBP7.24□□□□□ -1.25
MACF1-210ENST00000462496 MPHOSPH9Q99550 1183 aa7.23□□□□□ -1.25
MACF1-210ENST00000462496 CFDP1Q9UEE9 299 aaPredicted RBP7.23□□□□□ -1.25
MACF1-210ENST00000462496 NCOA1Q15788 1441 aa7.23□□□□□ -1.25
MACF1-210ENST00000462496 PREX2Q70Z35 1606 aa7.23□□□□□ -1.25
MACF1-210ENST00000462496 PZPP20742 1482 aa7.22□□□□□ -1.25
MACF1-210ENST00000462496 ABCC2Q92887 1545 aa7.22□□□□□ -1.25
MACF1-210ENST00000462496 ANKRD30BQ9BXX2 1392 aa7.21□□□□□ -1.25
MACF1-210ENST00000462496 TRIM52Q96A61 297 aa7.21□□□□□ -1.26
MACF1-210ENST00000462496 UHRF1BP1LA0JNW5 1464 aa7.21□□□□□ -1.26
MACF1-210ENST00000462496 RPRD2Q5VT52 1461 aaKnown RBP7.21□□□□□ -1.26
MACF1-210ENST00000462496 KDM5DQ9BY66 1539 aa7.21□□□□□ -1.26
MACF1-210ENST00000462496 CDC42BPBQ9Y5S2 1711 aa7.21□□□□□ -1.26
MACF1-210ENST00000462496 ANKRD30AQ9BXX3 1397 aa7.2□□□□□ -1.26
MACF1-210ENST00000462496 ERCC6L2Q5T890 1561 aa7.2□□□□□ -1.26
MACF1-210ENST00000462496 SAMD9LQ8IVG5 1584 aa7.2□□□□□ -1.26
MACF1-210ENST00000462496 MAST1Q9Y2H9 1570 aa7.2□□□□□ -1.26
MACF1-210ENST00000462496 MBD5Q9P267 1494 aa7.19□□□□□ -1.26
MACF1-210ENST00000462496 STAG3Q9UJ98 1225 aa7.19□□□□□ -1.26
MACF1-210ENST00000462496 C9orf84Q5VXU9 1444 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 TEX14Q8IWB6 1497 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 ABCB7O75027 752 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 SPOCK2Q92563 424 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 ANKRD50Q9ULJ7 1429 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 KIAA1107Q9UPP5 1409 aa7.18□□□□□ -1.26
MACF1-210ENST00000462496 CCDC141Q6ZP82 1450 aa7.17□□□□□ -1.26
MACF1-210ENST00000462496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.17□□□□□ -1.26
MACF1-210ENST00000462496 TTC37Q6PGP7 1564 aa7.17□□□□□ -1.26
MACF1-210ENST00000462496 HAP1P54257 671 aaPredicted RBP7.17□□□□□ -1.26
MACF1-210ENST00000462496 RSPH4AQ5TD94 716 aa7.17□□□□□ -1.26
MACF1-210ENST00000462496 MYO5CQ9NQX4 1742 aa7.17□□□□□ -1.26
MACF1-210ENST00000462496 PLEKHH2Q8IVE3 1493 aa7.17□□□□□ -1.26
MACF1-210ENST00000462496 ZCCHC11Q5TAX3 1644 aaKnown RBP7.16□□□□□ -1.26
MACF1-210ENST00000462496 SPDYE2BA6NHP3 402 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms