RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 PLPPR3Q6T4P5 718 aa32.95■■■□□ 2.87
NR1H3-216ENST00000462051 HECW1Q76N89 1606 aa32.95■■■□□ 2.86
NR1H3-216ENST00000462051 FMN1Q68DA7 1419 aa32.93■■■□□ 2.86
NR1H3-216ENST00000462051 MLECQ14165 292 aa32.92■■■□□ 2.86
NR1H3-216ENST00000462051 EFCAB2Q5VUJ9 269 aa32.92■■■□□ 2.86
NR1H3-216ENST00000462051 CDK11AQ9UQ88 783 aaPredicted RBP32.91■■■□□ 2.86
NR1H3-216ENST00000462051 HSPA2P54652 639 aa32.9■■■□□ 2.86
NR1H3-216ENST00000462051 ARHGAP35Q9NRY4 1499 aa32.88■■■□□ 2.85
NR1H3-216ENST00000462051 ATP10AO60312 1499 aa32.83■■■□□ 2.85
NR1H3-216ENST00000462051 MYO5CQ9NQX4 1742 aa32.82■■■□□ 2.85
NR1H3-216ENST00000462051 CHIC1Q5VXU3 224 aa32.8■■■□□ 2.84
NR1H3-216ENST00000462051 FER1L4A9Z1Z3 1794 aa32.78■■■□□ 2.84
NR1H3-216ENST00000462051 KIF14Q15058 1648 aa32.77■■■□□ 2.84
NR1H3-216ENST00000462051 TROQ12816 1431 aaPredicted RBP32.77■■■□□ 2.84
NR1H3-216ENST00000462051 AFAP1Q8N556 730 aa32.76■■■□□ 2.83
NR1H3-216ENST00000462051 C9orf84Q5VXU9 1444 aa32.76■■■□□ 2.83
NR1H3-216ENST00000462051 ARHGEF12Q9NZN5 1544 aa32.73■■■□□ 2.83
NR1H3-216ENST00000462051 ZNF518AQ6AHZ1 1483 aa32.7■■■□□ 2.83
NR1H3-216ENST00000462051 ARHGAP5Q13017 1502 aa32.7■■■□□ 2.83
NR1H3-216ENST00000462051 CLIP1P30622 1438 aa32.69■■■□□ 2.82
NR1H3-216ENST00000462051 CEBPAP49715 358 aaPredicted RBP32.69■■■□□ 2.82
NR1H3-216ENST00000462051 LRRIQ1Q96JM4 1722 aa32.68■■■□□ 2.82
NR1H3-216ENST00000462051 MYT1LQ9UL68 1186 aa32.67■■■□□ 2.82
NR1H3-216ENST00000462051 KDM5CP41229 1560 aa32.63■■■□□ 2.81
NR1H3-216ENST00000462051 CERKQ8TCT0 537 aa32.63■■■□□ 2.81
NR1H3-216ENST00000462051 CDC42BPBQ9Y5S2 1711 aa32.62■■■□□ 2.81
NR1H3-216ENST00000462051 PREX1Q8TCU6 1659 aa32.57■■■□□ 2.8
NR1H3-216ENST00000462051 CASKIN1Q8WXD9 1431 aa32.55■■■□□ 2.8
NR1H3-216ENST00000462051 MLH3Q9UHC1 1453 aa32.54■■■□□ 2.8
NR1H3-216ENST00000462051 SETD1BQ9UPS6 1966 aaKnown RBP32.54■■■□□ 2.8
NR1H3-216ENST00000462051 DIP2CQ9Y2E4 1556 aa32.54■■■□□ 2.8
NR1H3-216ENST00000462051 TRAPPC8Q9Y2L5 1435 aa32.52■■■□□ 2.8
NR1H3-216ENST00000462051 REREQ9P2R6 1566 aa32.51■■■□□ 2.79
NR1H3-216ENST00000462051 CCDC18Q5T9S5 1454 aa32.51■■■□□ 2.79
NR1H3-216ENST00000462051 PREX2Q70Z35 1606 aa32.49■■■□□ 2.79
NR1H3-216ENST00000462051 DMRT2Q9Y5R5 561 aa32.49■■■□□ 2.79
NR1H3-216ENST00000462051 ABCA6Q8N139 1617 aa32.48■■■□□ 2.79
NR1H3-216ENST00000462051 ABCC1P33527 1531 aa32.46■■■□□ 2.79
NR1H3-216ENST00000462051 UHRF1BP1Q6BDS2 1440 aa32.46■■■□□ 2.79
NR1H3-216ENST00000462051 STRCQ7RTU9 1775 aa32.45■■■□□ 2.79
NR1H3-216ENST00000462051 ESF1Q9H501 851 aaKnown RBP32.44■■■□□ 2.78
NR1H3-216ENST00000462051 AGLP35573 1532 aa32.44■■■□□ 2.78
NR1H3-216ENST00000462051 ITSN2Q9NZM3 1697 aa32.43■■■□□ 2.78
NR1H3-216ENST00000462051 CDC42BPAQ5VT25 1732 aa32.41■■■□□ 2.78
NR1H3-216ENST00000462051 C3P01024 1663 aa32.4■■■□□ 2.78
NR1H3-216ENST00000462051 KIDINS220Q9ULH0 1771 aa32.4■■■□□ 2.78
NR1H3-216ENST00000462051 ZNF777Q9ULD5 760 aaPredicted RBP32.38■■■□□ 2.77
NR1H3-216ENST00000462051 FYCO1Q9BQS8 1478 aa32.35■■■□□ 2.77
NR1H3-216ENST00000462051 HNRNPMP52272 730 aaKnown RBP eCLIP32.32■■■□□ 2.76
NR1H3-216ENST00000462051 SAMD9LQ8IVG5 1584 aa32.3■■■□□ 2.76
NR1H3-216ENST00000462051 GPATCH8Q9UKJ3 1502 aaKnown RBP32.3■■■□□ 2.76
NR1H3-216ENST00000462051 CNTLNQ9NXG0 1405 aa32.29■■■□□ 2.76
NR1H3-216ENST00000462051 PTPRTO14522 1441 aa32.28■■■□□ 2.76
NR1H3-216ENST00000462051 SPAG9O60271 1321 aaKnown RBP32.27■■■□□ 2.76
NR1H3-216ENST00000462051 SYCP2Q9BX26 1530 aa32.24■■■□□ 2.75
NR1H3-216ENST00000462051 CFDP1Q9UEE9 299 aaPredicted RBP32.23■■■□□ 2.75
NR1H3-216ENST00000462051 ZMYM3Q14202 1370 aa32.21■■■□□ 2.75
NR1H3-216ENST00000462051 KIAA1107Q9UPP5 1409 aa32.2■■■□□ 2.75
NR1H3-216ENST00000462051 SUPT6HQ7KZ85 1726 aaKnown RBP32.18■■■□□ 2.74
NR1H3-216ENST00000462051 CCNB3Q8WWL7 1395 aa32.18■■■□□ 2.74
NR1H3-216ENST00000462051 NPATQ14207 1427 aa32.17■■■□□ 2.74
NR1H3-216ENST00000462051 MROH2AA6NES4 1674 aa32.16■■■□□ 2.74
NR1H3-216ENST00000462051 NCOA1Q15788 1441 aa32.16■■■□□ 2.74
NR1H3-216ENST00000462051 PLEKHH2Q8IVE3 1493 aa32.16■■■□□ 2.74
NR1H3-216ENST00000462051 ATP7AQ04656 1500 aa32.14■■■□□ 2.74
NR1H3-216ENST00000462051 MTUS2Q5JR59 1369 aa32.12■■■□□ 2.73
NR1H3-216ENST00000462051 LTBP4Q8N2S1 1624 aa32.11■■■□□ 2.73
NR1H3-216ENST00000462051 A2MP01023 1474 aa32.1■■■□□ 2.73
NR1H3-216ENST00000462051 GGT6Q6P531 493 aa32.1■■■□□ 2.73
NR1H3-216ENST00000462051 INO80Q9ULG1 1556 aaPredicted RBP32.09■■■□□ 2.73
NR1H3-216ENST00000462051 CAMSAP1Q5T5Y3 1602 aa32.08■■■□□ 2.73
NR1H3-216ENST00000462051 ZNF644Q9H582 1327 aaPredicted RBP32.07■■■□□ 2.72
NR1H3-216ENST00000462051 PLXNC1O60486 1568 aa32.07■■■□□ 2.72
NR1H3-216ENST00000462051 NCKAP5LQ9HCH0 1330 aa32.06■■■□□ 2.72
NR1H3-216ENST00000462051 CLTCQ00610 1675 aaKnown RBP32.06■■■□□ 2.72
NR1H3-216ENST00000462051 PPP6R1Q9UPN7 881 aa32.04■■■□□ 2.72
NR1H3-216ENST00000462051 DISP3Q9P2K9 1392 aa32.02■■■□□ 2.72
NR1H3-216ENST00000462051 PTPRKQ15262 1439 aa32■■■□□ 2.71
NR1H3-216ENST00000462051 IQSEC2Q5JU85 1478 aa31.98■■■□□ 2.71
NR1H3-216ENST00000462051 MBD5Q9P267 1494 aa31.98■■■□□ 2.71
NR1H3-216ENST00000462051 ADGBQ8N7X0 1667 aa31.97■■■□□ 2.71
NR1H3-216ENST00000462051 PKD2Q13563 968 aa31.97■■■□□ 2.71
NR1H3-216ENST00000462051 ILDR2Q71H61 639 aa31.97■■■□□ 2.71
NR1H3-216ENST00000462051 TIAM1Q13009 1591 aa31.97■■■□□ 2.71
NR1H3-216ENST00000462051 RTEL1-TNFRSF6BF6WH68 1400 aa31.93■■■□□ 2.7
NR1H3-216ENST00000462051 ZNF335Q9H4Z2 1342 aaPredicted RBP31.93■■■□□ 2.7
NR1H3-216ENST00000462051 MYO3AQ8NEV4 1616 aa31.93■■■□□ 2.7
NR1H3-216ENST00000462051 ZNF142P52746 1687 aaPredicted RBP31.92■■■□□ 2.7
NR1H3-216ENST00000462051 PLA2R1Q13018 1463 aa31.91■■■□□ 2.7
NR1H3-216ENST00000462051 EHBP1L1Q8N3D4 1523 aa31.91■■■□□ 2.7
NR1H3-216ENST00000462051 DHX29Q7Z478 1369 aaKnown RBP31.91■■■□□ 2.7
NR1H3-216ENST00000462051 CEP162Q5TB80 1403 aa31.91■■■□□ 2.7
NR1H3-216ENST00000462051 CEP170BQ9Y4F5 1589 aaPredicted RBP31.9■■■□□ 2.7
NR1H3-216ENST00000462051 TCOF1Q13428 1488 aaKnown RBP31.87■■■□□ 2.69
NR1H3-216ENST00000462051 KIF3BO15066 747 aa31.85■■■□□ 2.69
NR1H3-216ENST00000462051 RSPH4AQ5TD94 716 aa31.83■■■□□ 2.69
NR1H3-216ENST00000462051 A2ML1A8K2U0 1454 aa31.81■■■□□ 2.68
NR1H3-216ENST00000462051 UBAP1LF5GYI3 381 aa31.81■■■□□ 2.68
NR1H3-216ENST00000462051 FBXO31Q5XUX0 539 aaPredicted RBP31.81■■■□□ 2.68
NR1H3-216ENST00000462051 SOCS7O14512 581 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms