RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 ARHGEF12Q9NZN5 1544 aa14.42□□□□□ -0.1
GABRE-204ENST00000462018 HSPA1LP34931 641 aa14.42□□□□□ -0.1
GABRE-204ENST00000462018 CEBPAP49715 358 aaPredicted RBP14.42□□□□□ -0.1
GABRE-204ENST00000462018 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
GABRE-204ENST00000462018 ZFYVE16Q7Z3T8 1539 aa14.41□□□□□ -0.1
GABRE-204ENST00000462018 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
GABRE-204ENST00000462018 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
GABRE-204ENST00000462018 SLC4A1APQ9BWU0 796 aaKnown RBP14.38□□□□□ -0.11
GABRE-204ENST00000462018 DENND4BO75064 1496 aaPredicted RBP14.38□□□□□ -0.11
GABRE-204ENST00000462018 EFCAB5A4FU69 1503 aa14.37□□□□□ -0.11
GABRE-204ENST00000462018 NCOA1Q15788 1441 aa14.37□□□□□ -0.11
GABRE-204ENST00000462018 ZNF335Q9H4Z2 1342 aaPredicted RBP14.37□□□□□ -0.11
GABRE-204ENST00000462018 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
GABRE-204ENST00000462018 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
GABRE-204ENST00000462018 SETD1BQ9UPS6 1966 aaKnown RBP14.33□□□□□ -0.12
GABRE-204ENST00000462018 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
GABRE-204ENST00000462018 ATP10BO94823 1461 aa14.31□□□□□ -0.12
GABRE-204ENST00000462018 C3P01024 1663 aa14.3□□□□□ -0.12
GABRE-204ENST00000462018 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
GABRE-204ENST00000462018 CAMSAP1Q5T5Y3 1602 aa14.27□□□□□ -0.12
GABRE-204ENST00000462018 SETD1AO15047 1707 aaKnown RBP14.27□□□□□ -0.13
GABRE-204ENST00000462018 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
GABRE-204ENST00000462018 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
GABRE-204ENST00000462018 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
GABRE-204ENST00000462018 CTTNBP2Q8WZ74 1663 aa14.24□□□□□ -0.13
GABRE-204ENST00000462018 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
GABRE-204ENST00000462018 GOLGA3Q08378 1498 aa14.22□□□□□ -0.13
GABRE-204ENST00000462018 ALKQ9UM73 1620 aa14.22□□□□□ -0.13
GABRE-204ENST00000462018 NCKAP5LQ9HCH0 1330 aa14.2□□□□□ -0.14
GABRE-204ENST00000462018 ATP10AO60312 1499 aa14.2□□□□□ -0.14
GABRE-204ENST00000462018 RAPGEF2Q9Y4G8 1499 aa14.19□□□□□ -0.14
GABRE-204ENST00000462018 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
GABRE-204ENST00000462018 TOM1O60784 492 aa14.14□□□□□ -0.15
GABRE-204ENST00000462018 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
GABRE-204ENST00000462018 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
GABRE-204ENST00000462018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
GABRE-204ENST00000462018 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
GABRE-204ENST00000462018 RAPGEF6Q8TEU7 1601 aa14.12□□□□□ -0.15
GABRE-204ENST00000462018 ZNF142P52746 1687 aaPredicted RBP14.11□□□□□ -0.15
GABRE-204ENST00000462018 SUPT6HQ7KZ85 1726 aaKnown RBP14.11□□□□□ -0.15
GABRE-204ENST00000462018 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
GABRE-204ENST00000462018 PLA2R1Q13018 1463 aa14.1□□□□□ -0.15
GABRE-204ENST00000462018 MYO3AQ8NEV4 1616 aa14.09□□□□□ -0.15
GABRE-204ENST00000462018 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
GABRE-204ENST00000462018 CPS1P31327 1500 aa14.09□□□□□ -0.15
GABRE-204ENST00000462018 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
GABRE-204ENST00000462018 NUP153P49790 1475 aaKnown RBP14.06□□□□□ -0.16
GABRE-204ENST00000462018 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
GABRE-204ENST00000462018 ABCA6Q8N139 1617 aa14.05□□□□□ -0.16
GABRE-204ENST00000462018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
GABRE-204ENST00000462018 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
GABRE-204ENST00000462018 PKD2Q13563 968 aa14.04□□□□□ -0.16
GABRE-204ENST00000462018 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
GABRE-204ENST00000462018 CEP170BQ9Y4F5 1589 aaPredicted RBP14.04□□□□□ -0.16
GABRE-204ENST00000462018 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
GABRE-204ENST00000462018 NPATQ14207 1427 aa14.03□□□□□ -0.16
GABRE-204ENST00000462018 SHANK2Q9UPX8 1470 aa14.03□□□□□ -0.16
GABRE-204ENST00000462018 AGLP35573 1532 aa14.03□□□□□ -0.16
GABRE-204ENST00000462018 MROH2AA6NES4 1674 aa14.02□□□□□ -0.16
GABRE-204ENST00000462018 KDM5CP41229 1560 aa14.02□□□□□ -0.16
GABRE-204ENST00000462018 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
GABRE-204ENST00000462018 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
GABRE-204ENST00000462018 POLR1AO95602 1720 aaPredicted RBP14□□□□□ -0.17
GABRE-204ENST00000462018 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
GABRE-204ENST00000462018 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
GABRE-204ENST00000462018 VWDEQ8N2E2 1590 aa13.99□□□□□ -0.17
GABRE-204ENST00000462018 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
GABRE-204ENST00000462018 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
GABRE-204ENST00000462018 ESF1Q9H501 851 aaKnown RBP13.97□□□□□ -0.17
GABRE-204ENST00000462018 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
GABRE-204ENST00000462018 SAMD9Q5K651 1589 aa13.96□□□□□ -0.18
GABRE-204ENST00000462018 PLCH2O75038 1416 aa13.95□□□□□ -0.18
GABRE-204ENST00000462018 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
GABRE-204ENST00000462018 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
GABRE-204ENST00000462018 MYO5CQ9NQX4 1742 aa13.93□□□□□ -0.18
GABRE-204ENST00000462018 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
GABRE-204ENST00000462018 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
GABRE-204ENST00000462018 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
GABRE-204ENST00000462018 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
GABRE-204ENST00000462018 AFAP1Q8N556 730 aa13.91□□□□□ -0.18
GABRE-204ENST00000462018 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
GABRE-204ENST00000462018 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
GABRE-204ENST00000462018 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
GABRE-204ENST00000462018 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
GABRE-204ENST00000462018 SYNMO15061 1565 aa13.88□□□□□ -0.19
GABRE-204ENST00000462018 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
GABRE-204ENST00000462018 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
GABRE-204ENST00000462018 CDK13Q14004 1512 aaKnown RBP13.85□□□□□ -0.19
GABRE-204ENST00000462018 KIDINS220Q9ULH0 1771 aa13.85□□□□□ -0.19
GABRE-204ENST00000462018 ZBTB22O15209 634 aa13.84□□□□□ -0.19
GABRE-204ENST00000462018 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
GABRE-204ENST00000462018 ARHGAP5Q13017 1502 aa13.82□□□□□ -0.2
GABRE-204ENST00000462018 KIF14Q15058 1648 aa13.82□□□□□ -0.2
GABRE-204ENST00000462018 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
GABRE-204ENST00000462018 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
GABRE-204ENST00000462018 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
GABRE-204ENST00000462018 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
GABRE-204ENST00000462018 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
GABRE-204ENST00000462018 NPHP4O75161 1426 aaPredicted RBP13.78□□□□□ -0.2
GABRE-204ENST00000462018 DEPDC5O75140 1603 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms