RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 ABCA8O94911 1581 aa12.77□□□□□ -0.37
TRAPPC10-205ENST00000461889 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC10-205ENST00000461889 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
TRAPPC10-205ENST00000461889 MLECQ14165 292 aa12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 CARMIL1Q5VZK9 1371 aa12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC10-205ENST00000461889 EFCAB5A4FU69 1503 aa12.73□□□□□ -0.37
TRAPPC10-205ENST00000461889 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
TRAPPC10-205ENST00000461889 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
TRAPPC10-205ENST00000461889 TOM1O60784 492 aa12.72□□□□□ -0.37
TRAPPC10-205ENST00000461889 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
TRAPPC10-205ENST00000461889 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
TRAPPC10-205ENST00000461889 PIP4K2BP78356 416 aa12.69□□□□□ -0.38
TRAPPC10-205ENST00000461889 C1QBPQ07021 282 aaKnown RBP12.67□□□□□ -0.38
TRAPPC10-205ENST00000461889 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
TRAPPC10-205ENST00000461889 ATP10BO94823 1461 aa12.65□□□□□ -0.38
TRAPPC10-205ENST00000461889 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
TRAPPC10-205ENST00000461889 ATP10AO60312 1499 aa12.64□□□□□ -0.39
TRAPPC10-205ENST00000461889 CAMSAP1Q5T5Y3 1602 aa12.63□□□□□ -0.39
TRAPPC10-205ENST00000461889 PKD2Q13563 968 aa12.62□□□□□ -0.39
TRAPPC10-205ENST00000461889 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
TRAPPC10-205ENST00000461889 POTEAQ6S8J7 498 aa12.61□□□□□ -0.39
TRAPPC10-205ENST00000461889 HECW1Q76N89 1606 aa12.61□□□□□ -0.39
TRAPPC10-205ENST00000461889 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
TRAPPC10-205ENST00000461889 C3P01024 1663 aa12.61□□□□□ -0.39
TRAPPC10-205ENST00000461889 CFAP74Q9C0B2 1584 aa12.6□□□□□ -0.39
TRAPPC10-205ENST00000461889 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
TRAPPC10-205ENST00000461889 PTPRKQ15262 1439 aa12.6□□□□□ -0.39
TRAPPC10-205ENST00000461889 PLA2R1Q13018 1463 aa12.58□□□□□ -0.4
TRAPPC10-205ENST00000461889 CPS1P31327 1500 aa12.57□□□□□ -0.4
TRAPPC10-205ENST00000461889 ALKQ9UM73 1620 aa12.57□□□□□ -0.4
TRAPPC10-205ENST00000461889 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
TRAPPC10-205ENST00000461889 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAPPC10-205ENST00000461889 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
TRAPPC10-205ENST00000461889 NPATQ14207 1427 aa12.54□□□□□ -0.4
TRAPPC10-205ENST00000461889 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
TRAPPC10-205ENST00000461889 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
TRAPPC10-205ENST00000461889 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC10-205ENST00000461889 AGLP35573 1532 aa12.49□□□□□ -0.41
TRAPPC10-205ENST00000461889 SHANK2Q9UPX8 1470 aa12.49□□□□□ -0.41
TRAPPC10-205ENST00000461889 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
TRAPPC10-205ENST00000461889 SCAPERQ9BY12 1400 aa12.48□□□□□ -0.41
TRAPPC10-205ENST00000461889 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
TRAPPC10-205ENST00000461889 ESF1Q9H501 851 aaKnown RBP12.48□□□□□ -0.41
TRAPPC10-205ENST00000461889 ZNF142P52746 1687 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC10-205ENST00000461889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAPPC10-205ENST00000461889 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
TRAPPC10-205ENST00000461889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC10-205ENST00000461889 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-205ENST00000461889 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
TRAPPC10-205ENST00000461889 CEP170BQ9Y4F5 1589 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC10-205ENST00000461889 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
TRAPPC10-205ENST00000461889 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
TRAPPC10-205ENST00000461889 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
TRAPPC10-205ENST00000461889 DIP2CQ9Y2E4 1556 aa12.39□□□□□ -0.43
TRAPPC10-205ENST00000461889 PLCH2O75038 1416 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 ZMYM3Q14202 1370 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 ZNF518AQ6AHZ1 1483 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 KDM5CP41229 1560 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 VWDEQ8N2E2 1590 aa12.38□□□□□ -0.43
TRAPPC10-205ENST00000461889 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
TRAPPC10-205ENST00000461889 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
TRAPPC10-205ENST00000461889 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
TRAPPC10-205ENST00000461889 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.44
TRAPPC10-205ENST00000461889 EFCAB2Q5VUJ9 269 aa12.33□□□□□ -0.44
TRAPPC10-205ENST00000461889 MLH3Q9UHC1 1453 aa12.33□□□□□ -0.44
TRAPPC10-205ENST00000461889 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC10-205ENST00000461889 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC10-205ENST00000461889 AFAP1Q8N556 730 aa12.32□□□□□ -0.44
TRAPPC10-205ENST00000461889 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
TRAPPC10-205ENST00000461889 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
TRAPPC10-205ENST00000461889 IFFO2Q5TF58 517 aa12.31□□□□□ -0.44
TRAPPC10-205ENST00000461889 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
TRAPPC10-205ENST00000461889 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
TRAPPC10-205ENST00000461889 P3H3Q8IVL6 736 aa12.29□□□□□ -0.44
TRAPPC10-205ENST00000461889 SYNMO15061 1565 aa12.28□□□□□ -0.44
TRAPPC10-205ENST00000461889 MED14O60244 1454 aa12.27□□□□□ -0.44
TRAPPC10-205ENST00000461889 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
TRAPPC10-205ENST00000461889 TRIM52Q96A61 297 aa12.27□□□□□ -0.45
TRAPPC10-205ENST00000461889 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC10-205ENST00000461889 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
TRAPPC10-205ENST00000461889 ANKLE2Q86XL3 938 aa12.25□□□□□ -0.45
TRAPPC10-205ENST00000461889 ZRANB1Q9UGI0 708 aa12.25□□□□□ -0.45
TRAPPC10-205ENST00000461889 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
TRAPPC10-205ENST00000461889 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
TRAPPC10-205ENST00000461889 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC10-205ENST00000461889 DEPDC5O75140 1603 aa12.22□□□□□ -0.45
TRAPPC10-205ENST00000461889 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC10-205ENST00000461889 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
TRAPPC10-205ENST00000461889 RXRBP28702 533 aa12.21□□□□□ -0.45
TRAPPC10-205ENST00000461889 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
TRAPPC10-205ENST00000461889 CLTCQ00610 1675 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-205ENST00000461889 CDK13Q14004 1512 aaKnown RBP12.2□□□□□ -0.46
TRAPPC10-205ENST00000461889 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
TRAPPC10-205ENST00000461889 JCADQ9P266 1359 aa12.18□□□□□ -0.46
TRAPPC10-205ENST00000461889 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms