RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 CDC42BPAQ5VT25 1732 aa37.4■■■■□ 3.58
CDH23-208ENST00000461841 RRP7BPQ9NSQ0 103 aa37.39■■■■□ 3.58
CDH23-208ENST00000461841 ZNF777Q9ULD5 760 aaPredicted RBP37.35■■■■□ 3.57
CDH23-208ENST00000461841 GCC2Q8IWJ2 1684 aa37.34■■■■□ 3.57
CDH23-208ENST00000461841 KDM5BQ9UGL1 1544 aa37.33■■■■□ 3.57
CDH23-208ENST00000461841 ROCK1Q13464 1354 aa37.31■■■■□ 3.56
CDH23-208ENST00000461841 ZCCHC11Q5TAX3 1644 aaKnown RBP37.3■■■■□ 3.56
CDH23-208ENST00000461841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.21■■■■□ 3.55
CDH23-208ENST00000461841 KDM6BO15054 1643 aa37.2■■■■□ 3.55
CDH23-208ENST00000461841 TTC37Q6PGP7 1564 aa37.19■■■■□ 3.54
CDH23-208ENST00000461841 PREX2Q70Z35 1606 aa37.18■■■■□ 3.54
CDH23-208ENST00000461841 CDC42BPBQ9Y5S2 1711 aa37.18■■■■□ 3.54
CDH23-208ENST00000461841 KCNH8Q96L42 1107 aa37.16■■■■□ 3.54
CDH23-208ENST00000461841 CROCC2H7BZ55 1655 aa37.15■■■■□ 3.54
CDH23-208ENST00000461841 NCOA1Q15788 1441 aa37.13■■■■□ 3.53
CDH23-208ENST00000461841 SIN3AQ96ST3 1273 aa37.11■■■■□ 3.53
CDH23-208ENST00000461841 ADGRL2O95490 1459 aa37.1■■■■□ 3.53
CDH23-208ENST00000461841 ADGBQ8N7X0 1667 aa37.09■■■■□ 3.53
CDH23-208ENST00000461841 SAMD9LQ8IVG5 1584 aa37.08■■■■□ 3.53
CDH23-208ENST00000461841 MBD5Q9P267 1494 aa37.06■■■■□ 3.52
CDH23-208ENST00000461841 ZNF316A6NFI3 1004 aaPredicted RBP37.05■■■■□ 3.52
CDH23-208ENST00000461841 HNRNPMP52272 730 aaKnown RBP eCLIP37.05■■■■□ 3.52
CDH23-208ENST00000461841 SHANK2Q9UPX8 1470 aa37.05■■■■□ 3.52
CDH23-208ENST00000461841 TRIM52Q96A61 297 aa37.05■■■■□ 3.52
CDH23-208ENST00000461841 ARHGEF5Q12774 1597 aa37.04■■■■□ 3.52
CDH23-208ENST00000461841 MYO5CQ9NQX4 1742 aa37.04■■■■□ 3.52
CDH23-208ENST00000461841 ARHGAP5Q13017 1502 aa37.04■■■■□ 3.52
CDH23-208ENST00000461841 NEUROD1Q13562 356 aa37.03■■■■□ 3.52
CDH23-208ENST00000461841 ACIN1Q9UKV3 1341 aaKnown RBP37.02■■■■□ 3.52
CDH23-208ENST00000461841 ANKRD30AQ9BXX3 1397 aa37.02■■■■□ 3.52
CDH23-208ENST00000461841 C9orf84Q5VXU9 1444 aa37■■■■□ 3.51
CDH23-208ENST00000461841 TSPY4P0CV99 314 aa36.98■■■■□ 3.51
CDH23-208ENST00000461841 TSPY10P0CW01 314 aa36.98■■■■□ 3.51
CDH23-208ENST00000461841 PLCH2O75038 1416 aa36.98■■■■□ 3.51
CDH23-208ENST00000461841 DENND4BO75064 1496 aaPredicted RBP36.98■■■■□ 3.51
CDH23-208ENST00000461841 WDR7Q9Y4E6 1490 aa36.97■■■■□ 3.51
CDH23-208ENST00000461841 TIMELESSQ9UNS1 1208 aa36.97■■■■□ 3.51
CDH23-208ENST00000461841 RSPH4AQ5TD94 716 aa36.96■■■■□ 3.51
CDH23-208ENST00000461841 MPHOSPH9Q99550 1183 aa36.94■■■■□ 3.5
CDH23-208ENST00000461841 CCDC141Q6ZP82 1450 aa36.94■■■■□ 3.5
CDH23-208ENST00000461841 SYCP2Q9BX26 1530 aa36.91■■■■□ 3.5
CDH23-208ENST00000461841 KIAA1107Q9UPP5 1409 aa36.89■■■■□ 3.5
CDH23-208ENST00000461841 PLEKHH2Q8IVE3 1493 aa36.88■■■■□ 3.5
CDH23-208ENST00000461841 ANKRD50Q9ULJ7 1429 aa36.87■■■■□ 3.49
CDH23-208ENST00000461841 EFCAB2Q5VUJ9 269 aa36.86■■■■□ 3.49
CDH23-208ENST00000461841 ASXL2Q76L83 1435 aa36.86■■■■□ 3.49
CDH23-208ENST00000461841 NPM1P06748 294 aaKnown RBP eCLIP36.81■■■■□ 3.48
CDH23-208ENST00000461841 DIEXFQ68CQ4 756 aaKnown RBP36.8■■■■□ 3.48
CDH23-208ENST00000461841 ARAP3Q8WWN8 1544 aa36.8■■■■□ 3.48
CDH23-208ENST00000461841 ARHGEF12Q9NZN5 1544 aa36.8■■■■□ 3.48
CDH23-208ENST00000461841 KIF15Q9NS87 1388 aa36.8■■■■□ 3.48
CDH23-208ENST00000461841 ABCA9Q8IUA7 1624 aa36.76■■■■□ 3.48
CDH23-208ENST00000461841 MAST1Q9Y2H9 1570 aa36.76■■■■□ 3.48
CDH23-208ENST00000461841 SLC4A1APQ9BWU0 796 aaKnown RBP36.76■■■■□ 3.48
CDH23-208ENST00000461841 PZPP20742 1482 aa36.75■■■■□ 3.47
CDH23-208ENST00000461841 TONSLQ96HA7 1378 aa36.75■■■■□ 3.47
CDH23-208ENST00000461841 PPP1R15AO75807 674 aaPredicted RBP36.74■■■■□ 3.47
CDH23-208ENST00000461841 FOXD1Q16676 465 aa36.74■■■■□ 3.47
CDH23-208ENST00000461841 ABCC1P33527 1531 aa36.73■■■■□ 3.47
CDH23-208ENST00000461841 ANKRD30BQ9BXX2 1392 aa36.68■■■■□ 3.46
CDH23-208ENST00000461841 TRAPPC8Q9Y2L5 1435 aa36.64■■■■□ 3.46
CDH23-208ENST00000461841 FANCAO15360 1455 aa36.63■■■■□ 3.45
CDH23-208ENST00000461841 PLXNC1O60486 1568 aa36.62■■■■□ 3.45
CDH23-208ENST00000461841 NUP155O75694 1391 aa36.61■■■■□ 3.45
CDH23-208ENST00000461841 KDM5DQ9BY66 1539 aa36.57■■■■□ 3.44
CDH23-208ENST00000461841 PKD2Q13563 968 aa36.54■■■■□ 3.44
CDH23-208ENST00000461841 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
CDH23-208ENST00000461841 AFAP1Q8N556 730 aa36.53■■■■□ 3.44
CDH23-208ENST00000461841 RPRD2Q5VT52 1461 aaKnown RBP36.53■■■■□ 3.44
CDH23-208ENST00000461841 RIMBP3CA6NJZ7 1639 aa36.52■■■■□ 3.44
CDH23-208ENST00000461841 RIMBP3BA6NNM3 1639 aa36.52■■■■□ 3.44
CDH23-208ENST00000461841 RIMBP3Q9UFD9 1639 aa36.52■■■■□ 3.44
CDH23-208ENST00000461841 DUOX2Q9NRD8 1548 aa36.5■■■■□ 3.43
CDH23-208ENST00000461841 SPAG9O60271 1321 aaKnown RBP36.49■■■■□ 3.43
CDH23-208ENST00000461841 RTEL1-TNFRSF6BF6WH68 1400 aa36.48■■■■□ 3.43
CDH23-208ENST00000461841 ADGRL1O94910 1474 aa36.47■■■■□ 3.43
CDH23-208ENST00000461841 CD109Q6YHK3 1445 aa36.45■■■■□ 3.43
CDH23-208ENST00000461841 SCAPERQ9BY12 1400 aa36.45■■■■□ 3.43
CDH23-208ENST00000461841 ERBINQ96RT1 1412 aa36.43■■■■□ 3.42
CDH23-208ENST00000461841 L3MBTL2Q969R5 705 aa36.42■■■■□ 3.42
CDH23-208ENST00000461841 ZFYVE16Q7Z3T8 1539 aa36.42■■■■□ 3.42
CDH23-208ENST00000461841 UNC13BO14795 1591 aa36.41■■■■□ 3.42
CDH23-208ENST00000461841 FAM135AQ9P2D6 1515 aa36.4■■■■□ 3.42
CDH23-208ENST00000461841 TEX14Q8IWB6 1497 aa36.35■■■■□ 3.41
CDH23-208ENST00000461841 INO80Q9ULG1 1556 aaPredicted RBP36.34■■■■□ 3.41
CDH23-208ENST00000461841 ATP7AQ04656 1500 aa36.33■■■■□ 3.41
CDH23-208ENST00000461841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.31■■■■□ 3.4
CDH23-208ENST00000461841 CFAP74Q9C0B2 1584 aa36.3■■■■□ 3.4
CDH23-208ENST00000461841 MAGI2Q86UL8 1455 aa36.3■■■■□ 3.4
CDH23-208ENST00000461841 IQGAP3Q86VI3 1631 aa36.28■■■■□ 3.4
CDH23-208ENST00000461841 ZNF518AQ6AHZ1 1483 aa36.25■■■■□ 3.39
CDH23-208ENST00000461841 MYT1LQ9UL68 1186 aa36.2■■■■□ 3.39
CDH23-208ENST00000461841 MIER1Q8N108 512 aa36.19■■■■□ 3.38
CDH23-208ENST00000461841 HIRIP3Q9BW71 556 aaPredicted RBP36.19■■■■□ 3.38
CDH23-208ENST00000461841 NEO1Q92859 1461 aa36.18■■■■□ 3.38
CDH23-208ENST00000461841 POGZQ7Z3K3 1410 aa36.18■■■■□ 3.38
CDH23-208ENST00000461841 KIDINS220Q9ULH0 1771 aa36.17■■■■□ 3.38
CDH23-208ENST00000461841 MAP3K4Q9Y6R4 1608 aa36.16■■■■□ 3.38
CDH23-208ENST00000461841 NBPF8Q3BBV2 869 aa36.15■■■■□ 3.38
CDH23-208ENST00000461841 GLI2P10070 1586 aa36.15■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms