RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
COPS7B-217ENST00000461350 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
COPS7B-217ENST00000461350 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
COPS7B-217ENST00000461350 ITSN2Q9NZM3 1697 aa16.2■□□□□ 0.18
COPS7B-217ENST00000461350 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
COPS7B-217ENST00000461350 NAIPQ13075 1403 aa16.2■□□□□ 0.18
COPS7B-217ENST00000461350 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
COPS7B-217ENST00000461350 CAMSAP2Q08AD1 1489 aa16.2■□□□□ 0.18
COPS7B-217ENST00000461350 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
COPS7B-217ENST00000461350 DAPK1P53355 1430 aa16.18■□□□□ 0.18
COPS7B-217ENST00000461350 ABCC5O15440 1437 aa16.18■□□□□ 0.18
COPS7B-217ENST00000461350 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
COPS7B-217ENST00000461350 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
COPS7B-217ENST00000461350 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
COPS7B-217ENST00000461350 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
COPS7B-217ENST00000461350 MAPKBP1O60336 1514 aa16.14■□□□□ 0.18
COPS7B-217ENST00000461350 TTC37Q6PGP7 1564 aa16.14■□□□□ 0.17
COPS7B-217ENST00000461350 KDM6BO15054 1643 aa16.13■□□□□ 0.17
COPS7B-217ENST00000461350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.17
COPS7B-217ENST00000461350 HNRNPMP52272 730 aaKnown RBP eCLIP16.12■□□□□ 0.176e-7■■■□□ 17.6
COPS7B-217ENST00000461350 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
COPS7B-217ENST00000461350 SIN3AQ96ST3 1273 aa16.1■□□□□ 0.17
COPS7B-217ENST00000461350 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
COPS7B-217ENST00000461350 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
COPS7B-217ENST00000461350 AKNAQ7Z591 1439 aa16.09■□□□□ 0.17
COPS7B-217ENST00000461350 PREX2Q70Z35 1606 aa16.08■□□□□ 0.17
COPS7B-217ENST00000461350 ARHGAP5Q13017 1502 aa16.08■□□□□ 0.16
COPS7B-217ENST00000461350 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
COPS7B-217ENST00000461350 SAMD9LQ8IVG5 1584 aa16.06■□□□□ 0.16
COPS7B-217ENST00000461350 MYO5CQ9NQX4 1742 aa16.05■□□□□ 0.16
COPS7B-217ENST00000461350 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
COPS7B-217ENST00000461350 NCOA1Q15788 1441 aa16.04■□□□□ 0.16
COPS7B-217ENST00000461350 WDR7Q9Y4E6 1490 aa16.03■□□□□ 0.16
COPS7B-217ENST00000461350 TSPY4P0CV99 314 aa16.02■□□□□ 0.16
COPS7B-217ENST00000461350 TSPY10P0CW01 314 aa16.02■□□□□ 0.16
COPS7B-217ENST00000461350 MBD5Q9P267 1494 aa16.02■□□□□ 0.16
COPS7B-217ENST00000461350 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
COPS7B-217ENST00000461350 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
COPS7B-217ENST00000461350 ASXL2Q76L83 1435 aa16.02■□□□□ 0.15
COPS7B-217ENST00000461350 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
COPS7B-217ENST00000461350 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
COPS7B-217ENST00000461350 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
COPS7B-217ENST00000461350 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
COPS7B-217ENST00000461350 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
COPS7B-217ENST00000461350 FOXD1Q16676 465 aa16■□□□□ 0.15
COPS7B-217ENST00000461350 PLCH2O75038 1416 aa16■□□□□ 0.15
COPS7B-217ENST00000461350 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
COPS7B-217ENST00000461350 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
COPS7B-217ENST00000461350 CCDC141Q6ZP82 1450 aa15.98■□□□□ 0.15
COPS7B-217ENST00000461350 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
COPS7B-217ENST00000461350 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
COPS7B-217ENST00000461350 ARHGEF5Q12774 1597 aa15.97■□□□□ 0.15
COPS7B-217ENST00000461350 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
COPS7B-217ENST00000461350 SHANK2Q9UPX8 1470 aa15.96■□□□□ 0.15
COPS7B-217ENST00000461350 ANKRD50Q9ULJ7 1429 aa15.95■□□□□ 0.14
COPS7B-217ENST00000461350 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
COPS7B-217ENST00000461350 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
COPS7B-217ENST00000461350 RSPH4AQ5TD94 716 aa15.92■□□□□ 0.14
COPS7B-217ENST00000461350 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
COPS7B-217ENST00000461350 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
COPS7B-217ENST00000461350 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
COPS7B-217ENST00000461350 KIAA1107Q9UPP5 1409 aa15.92■□□□□ 0.14
COPS7B-217ENST00000461350 ABCA9Q8IUA7 1624 aa15.91■□□□□ 0.14
COPS7B-217ENST00000461350 TRAPPC8Q9Y2L5 1435 aa15.91■□□□□ 0.14
COPS7B-217ENST00000461350 PLEKHH2Q8IVE3 1493 aa15.91■□□□□ 0.14
COPS7B-217ENST00000461350 AFAP1Q8N556 730 aa15.9■□□□□ 0.14
COPS7B-217ENST00000461350 ABCC1P33527 1531 aa15.9■□□□□ 0.14
COPS7B-217ENST00000461350 FANCAO15360 1455 aa15.89■□□□□ 0.13
COPS7B-217ENST00000461350 PZPP20742 1482 aa15.88■□□□□ 0.13
COPS7B-217ENST00000461350 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
COPS7B-217ENST00000461350 NUP155O75694 1391 aa15.86■□□□□ 0.13
COPS7B-217ENST00000461350 ARAP3Q8WWN8 1544 aa15.85■□□□□ 0.13
COPS7B-217ENST00000461350 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
COPS7B-217ENST00000461350 PKD2Q13563 968 aa15.84■□□□□ 0.13
COPS7B-217ENST00000461350 PPP1R15AO75807 674 aaPredicted RBP15.84■□□□□ 0.13
COPS7B-217ENST00000461350 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
COPS7B-217ENST00000461350 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
COPS7B-217ENST00000461350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.136e-8■■□□□ 11.8
COPS7B-217ENST00000461350 CD109Q6YHK3 1445 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 ADGRL1O94910 1474 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 SCAPERQ9BY12 1400 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.12
COPS7B-217ENST00000461350 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
COPS7B-217ENST00000461350 BCANQ96GW7 911 aa15.79■□□□□ 0.12
COPS7B-217ENST00000461350 ZFYVE16Q7Z3T8 1539 aa15.77■□□□□ 0.11
COPS7B-217ENST00000461350 DUOX2Q9NRD8 1548 aa15.76■□□□□ 0.11
COPS7B-217ENST00000461350 L3MBTL2Q969R5 705 aa15.76■□□□□ 0.11
COPS7B-217ENST00000461350 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
COPS7B-217ENST00000461350 RPRD2Q5VT52 1461 aaKnown RBP15.74■□□□□ 0.11
COPS7B-217ENST00000461350 KDM5DQ9BY66 1539 aa15.74■□□□□ 0.11
COPS7B-217ENST00000461350 FAM135AQ9P2D6 1515 aa15.74■□□□□ 0.11
COPS7B-217ENST00000461350 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
COPS7B-217ENST00000461350 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
COPS7B-217ENST00000461350 RTEL1-TNFRSF6BF6WH68 1400 aa15.73■□□□□ 0.11
COPS7B-217ENST00000461350 FAM69CQ0P6D2 419 aa15.72■□□□□ 0.11
COPS7B-217ENST00000461350 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
COPS7B-217ENST00000461350 RAPGEF3O95398 923 aa15.72■□□□□ 0.11
COPS7B-217ENST00000461350 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms