RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
CHRD-209ENST00000461120 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
CHRD-209ENST00000461120 KIF14Q15058 1648 aa21.62■■□□□ 1.05
CHRD-209ENST00000461120 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
CHRD-209ENST00000461120 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
CHRD-209ENST00000461120 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
CHRD-209ENST00000461120 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
CHRD-209ENST00000461120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.6■■□□□ 1.05
CHRD-209ENST00000461120 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
CHRD-209ENST00000461120 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.05
CHRD-209ENST00000461120 TTC37Q6PGP7 1564 aa21.57■■□□□ 1.04
CHRD-209ENST00000461120 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
CHRD-209ENST00000461120 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
CHRD-209ENST00000461120 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
CHRD-209ENST00000461120 NCOA2Q15596 1464 aa21.49■■□□□ 1.03
CHRD-209ENST00000461120 MYO5CQ9NQX4 1742 aa21.48■■□□□ 1.03
CHRD-209ENST00000461120 PLCH2O75038 1416 aa21.47■■□□□ 1.03
CHRD-209ENST00000461120 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
CHRD-209ENST00000461120 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
CHRD-209ENST00000461120 GPATCH8Q9UKJ3 1502 aaKnown RBP21.44■■□□□ 1.02
CHRD-209ENST00000461120 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
CHRD-209ENST00000461120 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
CHRD-209ENST00000461120 YEATS2Q9ULM3 1422 aa21.42■■□□□ 1.02
CHRD-209ENST00000461120 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
CHRD-209ENST00000461120 FANCAO15360 1455 aa21.41■■□□□ 1.02
CHRD-209ENST00000461120 ARHGAP5Q13017 1502 aa21.4■■□□□ 1.02
CHRD-209ENST00000461120 NEO1Q92859 1461 aa21.4■■□□□ 1.02
CHRD-209ENST00000461120 PPARGC1BQ86YN6 1023 aaKnown RBP21.4■■□□□ 1.02
CHRD-209ENST00000461120 RAPGEF3O95398 923 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 EFCAB2Q5VUJ9 269 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.01
CHRD-209ENST00000461120 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 CFAP74Q9C0B2 1584 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
CHRD-209ENST00000461120 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
CHRD-209ENST00000461120 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
CHRD-209ENST00000461120 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
CHRD-209ENST00000461120 MYOM3Q5VTT5 1437 aa21.35■■□□□ 1.01
CHRD-209ENST00000461120 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1
CHRD-209ENST00000461120 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
CHRD-209ENST00000461120 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
CHRD-209ENST00000461120 MIA2Q96PC5 1412 aa21.29■■□□□ 1
CHRD-209ENST00000461120 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
CHRD-209ENST00000461120 SETD1BQ9UPS6 1966 aaKnown RBP21.28■■□□□ 1
CHRD-209ENST00000461120 ABCC1P33527 1531 aa21.28■■□□□ 1
CHRD-209ENST00000461120 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
CHRD-209ENST00000461120 ZNF644Q9H582 1327 aaPredicted RBP21.27■□□□□ 0.99
CHRD-209ENST00000461120 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
CHRD-209ENST00000461120 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
CHRD-209ENST00000461120 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
CHRD-209ENST00000461120 PTPRTO14522 1441 aa21.25■□□□□ 0.99
CHRD-209ENST00000461120 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
CHRD-209ENST00000461120 ARHGEF12Q9NZN5 1544 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 KIAA1107Q9UPP5 1409 aa21.24■□□□□ 0.99
CHRD-209ENST00000461120 SYCP2Q9BX26 1530 aa21.23■□□□□ 0.99
CHRD-209ENST00000461120 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
CHRD-209ENST00000461120 RICTORQ6R327 1708 aa21.21■□□□□ 0.99
CHRD-209ENST00000461120 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
CHRD-209ENST00000461120 LTBP4Q8N2S1 1624 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 HNRNPMP52272 730 aaKnown RBP eCLIP21.2■□□□□ 0.98
CHRD-209ENST00000461120 MLECQ14165 292 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 TRAPPC8Q9Y2L5 1435 aa21.2■□□□□ 0.98
CHRD-209ENST00000461120 UHRF1BP1Q6BDS2 1440 aa21.19■□□□□ 0.98
CHRD-209ENST00000461120 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
CHRD-209ENST00000461120 ZNF518AQ6AHZ1 1483 aa21.18■□□□□ 0.98
CHRD-209ENST00000461120 MED1Q15648 1581 aaPredicted RBP21.18■□□□□ 0.98
CHRD-209ENST00000461120 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
CHRD-209ENST00000461120 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
CHRD-209ENST00000461120 KDM5CP41229 1560 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.98
CHRD-209ENST00000461120 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
CHRD-209ENST00000461120 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
CHRD-209ENST00000461120 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
CHRD-209ENST00000461120 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
CHRD-209ENST00000461120 ZFYVE16Q7Z3T8 1539 aa21.09■□□□□ 0.97
CHRD-209ENST00000461120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHRD-209ENST00000461120 MAGI2Q86UL8 1455 aa21.08■□□□□ 0.97
CHRD-209ENST00000461120 MLH3Q9UHC1 1453 aa21.08■□□□□ 0.97
CHRD-209ENST00000461120 DNMT1P26358 1616 aaKnown RBP21.08■□□□□ 0.97
CHRD-209ENST00000461120 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
CHRD-209ENST00000461120 ABCC5O15440 1437 aa21.07■□□□□ 0.96
CHRD-209ENST00000461120 DAPK1P53355 1430 aa21.06■□□□□ 0.96
CHRD-209ENST00000461120 SIGLEC1Q9BZZ2 1709 aa21.06■□□□□ 0.96
CHRD-209ENST00000461120 CEBPAP49715 358 aaPredicted RBP21.05■□□□□ 0.96
CHRD-209ENST00000461120 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
CHRD-209ENST00000461120 TSPY4P0CV99 314 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 TSPY10P0CW01 314 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 MYT1LQ9UL68 1186 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 CROCC2H7BZ55 1655 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
CHRD-209ENST00000461120 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
CHRD-209ENST00000461120 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 SHANK2Q9UPX8 1470 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 C9orf84Q5VXU9 1444 aa21.02■□□□□ 0.96
CHRD-209ENST00000461120 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CHRD-209ENST00000461120 ABCA6Q8N139 1617 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms