RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 SF3B2Q13435 895 aaKnown RBP13.98□□□□□ -0.17
EPB41-208ENST00000460378 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
EPB41-208ENST00000460378 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
EPB41-208ENST00000460378 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
EPB41-208ENST00000460378 RIMBP3CA6NJZ7 1639 aa13.96□□□□□ -0.17
EPB41-208ENST00000460378 RIMBP3BA6NNM3 1639 aa13.96□□□□□ -0.17
EPB41-208ENST00000460378 RIMBP3Q9UFD9 1639 aa13.96□□□□□ -0.17
EPB41-208ENST00000460378 HSPA2P54652 639 aa13.96□□□□□ -0.17
EPB41-208ENST00000460378 WDR7Q9Y4E6 1490 aa13.96□□□□□ -0.18
EPB41-208ENST00000460378 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 NEFMP07197 916 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
EPB41-208ENST00000460378 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
EPB41-208ENST00000460378 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
EPB41-208ENST00000460378 FANCAO15360 1455 aa13.92□□□□□ -0.18
EPB41-208ENST00000460378 ADGRL1O94910 1474 aa13.92□□□□□ -0.18
EPB41-208ENST00000460378 ARHGAP35Q9NRY4 1499 aa13.9□□□□□ -0.18
EPB41-208ENST00000460378 CHD1O14646 1710 aa13.89□□□□□ -0.19
EPB41-208ENST00000460378 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
EPB41-208ENST00000460378 RUSC2Q8N2Y8 1516 aa13.88□□□□□ -0.19
EPB41-208ENST00000460378 STK26Q9P289 416 aa13.86□□□□□ -0.19
EPB41-208ENST00000460378 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
EPB41-208ENST00000460378 TROQ12816 1431 aaPredicted RBP13.85□□□□□ -0.19
EPB41-208ENST00000460378 UHRF1BP1Q6BDS2 1440 aa13.85□□□□□ -0.19
EPB41-208ENST00000460378 KDM6BO15054 1643 aa13.85□□□□□ -0.19
EPB41-208ENST00000460378 NUTM2BA6NNL0 878 aaPredicted RBP13.84□□□□□ -0.19
EPB41-208ENST00000460378 NUTM2EB1AL46 878 aaPredicted RBP13.84□□□□□ -0.19
EPB41-208ENST00000460378 NUTM2AQ8IVF1 878 aaPredicted RBP13.84□□□□□ -0.19
EPB41-208ENST00000460378 CNGB1Q14028 1251 aaPredicted RBP13.84□□□□□ -0.19
EPB41-208ENST00000460378 ABCC10Q5T3U5 1492 aa13.84□□□□□ -0.19
EPB41-208ENST00000460378 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.19
EPB41-208ENST00000460378 LMTK3Q96Q04 1460 aa13.83□□□□□ -0.2
EPB41-208ENST00000460378 PKD2Q13563 968 aa13.82□□□□□ -0.2
EPB41-208ENST00000460378 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
EPB41-208ENST00000460378 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
EPB41-208ENST00000460378 NUP155O75694 1391 aa13.82□□□□□ -0.2
EPB41-208ENST00000460378 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
EPB41-208ENST00000460378 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
EPB41-208ENST00000460378 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
EPB41-208ENST00000460378 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
EPB41-208ENST00000460378 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
EPB41-208ENST00000460378 EVA1CP58658 441 aa13.77□□□□□ -0.2
EPB41-208ENST00000460378 HECW1Q76N89 1606 aa13.77□□□□□ -0.21
EPB41-208ENST00000460378 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
EPB41-208ENST00000460378 TMC1Q8TDI8 760 aa13.76□□□□□ -0.21
EPB41-208ENST00000460378 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
EPB41-208ENST00000460378 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
EPB41-208ENST00000460378 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
EPB41-208ENST00000460378 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
EPB41-208ENST00000460378 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
EPB41-208ENST00000460378 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
EPB41-208ENST00000460378 VPS8Q8N3P4 1428 aa13.73□□□□□ -0.21
EPB41-208ENST00000460378 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
EPB41-208ENST00000460378 PSME1Q06323 249 aa13.71□□□□□ -0.21
EPB41-208ENST00000460378 TNRQ92752 1358 aa13.71□□□□□ -0.22
EPB41-208ENST00000460378 ABCA5Q8WWZ7 1642 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
EPB41-208ENST00000460378 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 NEO1Q92859 1461 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
EPB41-208ENST00000460378 ATP10BO94823 1461 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
EPB41-208ENST00000460378 KIF14Q15058 1648 aa13.68□□□□□ -0.22
EPB41-208ENST00000460378 PLCH2O75038 1416 aa13.68□□□□□ -0.22
EPB41-208ENST00000460378 EPRSP07814 1512 aaKnown RBP13.68□□□□□ -0.22
EPB41-208ENST00000460378 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
EPB41-208ENST00000460378 NPHP1O15259 732 aa13.67□□□□□ -0.22
EPB41-208ENST00000460378 UHRF1BP1LA0JNW5 1464 aa13.67□□□□□ -0.22
EPB41-208ENST00000460378 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
EPB41-208ENST00000460378 MSH6P52701 1360 aa13.67□□□□□ -0.22
EPB41-208ENST00000460378 NGLY1Q96IV0 654 aa13.67□□□□□ -0.22
EPB41-208ENST00000460378 ATP10AO60312 1499 aa13.66□□□□□ -0.22
EPB41-208ENST00000460378 CDCA8Q53HL2 280 aa13.66□□□□□ -0.22
EPB41-208ENST00000460378 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
EPB41-208ENST00000460378 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.23
EPB41-208ENST00000460378 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
EPB41-208ENST00000460378 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
EPB41-208ENST00000460378 SOX12O15370 315 aa13.63□□□□□ -0.23
EPB41-208ENST00000460378 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
EPB41-208ENST00000460378 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
EPB41-208ENST00000460378 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
EPB41-208ENST00000460378 KIF21BO75037 1637 aa13.61□□□□□ -0.23
EPB41-208ENST00000460378 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
EPB41-208ENST00000460378 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
EPB41-208ENST00000460378 HDGFL2Q7Z4V5 671 aaPredicted RBP13.6□□□□□ -0.23
EPB41-208ENST00000460378 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
EPB41-208ENST00000460378 RAPGEF6Q8TEU7 1601 aa13.59□□□□□ -0.23
EPB41-208ENST00000460378 ARXQ96QS3 562 aa13.59□□□□□ -0.23
EPB41-208ENST00000460378 ZMYM3Q14202 1370 aa13.59□□□□□ -0.23
EPB41-208ENST00000460378 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms