RNA–Protein interactions for RNA: ENST00000459810.1

SUN1-223, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-223	ENST00000459810	CDK13	Q14004	1512 aa	Known RBP	32.57	■■■□□ 2.8
SUN1-223	ENST00000459810	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.56	■■■□□ 2.8
SUN1-223	ENST00000459810	HECW1	Q76N89	1606 aa		32.55	■■■□□ 2.8
SUN1-223	ENST00000459810	ATP10A	O60312	1499 aa		32.54	■■■□□ 2.8
SUN1-223	ENST00000459810	UBTF	P17480	764 aa	Known RBP	32.53	■■■□□ 2.8
SUN1-223	ENST00000459810	FMN1	Q68DA7	1419 aa		32.51	■■■□□ 2.8
SUN1-223	ENST00000459810	CERK	Q8TCT0	537 aa		32.51	■■■□□ 2.79
SUN1-223	ENST00000459810	SIGLEC1	Q9BZZ2	1709 aa		32.49	■■■□□ 2.79
SUN1-223	ENST00000459810	C9orf84	Q5VXU9	1444 aa		32.45	■■■□□ 2.79
SUN1-223	ENST00000459810	AFAP1	Q8N556	730 aa		32.43	■■■□□ 2.78
SUN1-223	ENST00000459810	ARHGEF12	Q9NZN5	1544 aa		32.42	■■■□□ 2.78
SUN1-223	ENST00000459810	CEBPA	P49715	358 aa	Predicted RBP	32.42	■■■□□ 2.78
SUN1-223	ENST00000459810	EHMT2	Q96KQ7	1210 aa		32.4	■■■□□ 2.78
SUN1-223	ENST00000459810	ARHGAP35	Q9NRY4	1499 aa		32.39	■■■□□ 2.78
SUN1-223	ENST00000459810	DMRT2	Q9Y5R5	561 aa		32.38	■■■□□ 2.77
SUN1-223	ENST00000459810	ZNF518A	Q6AHZ1	1483 aa		32.37	■■■□□ 2.77
SUN1-223	ENST00000459810	TRO	Q12816	1431 aa	Predicted RBP	32.37	■■■□□ 2.77
SUN1-223	ENST00000459810	FER1L4	A9Z1Z3	1794 aa		32.35	■■■□□ 2.77
SUN1-223	ENST00000459810	MYT1L	Q9UL68	1186 aa		32.33	■■■□□ 2.77
SUN1-223	ENST00000459810	CLIP1	P30622	1438 aa		32.31	■■■□□ 2.76
SUN1-223	ENST00000459810	MYO5C	Q9NQX4	1742 aa		32.3	■■■□□ 2.76
SUN1-223	ENST00000459810	ARHGAP5	Q13017	1502 aa		32.28	■■■□□ 2.76
SUN1-223	ENST00000459810	KDM5C	P41229	1560 aa		32.26	■■■□□ 2.75
SUN1-223	ENST00000459810	KIF14	Q15058	1648 aa		32.26	■■■□□ 2.75
SUN1-223	ENST00000459810	MLH3	Q9UHC1	1453 aa		32.23	■■■□□ 2.75
SUN1-223	ENST00000459810	UHRF1BP1	Q6BDS2	1440 aa		32.23	■■■□□ 2.75
SUN1-223	ENST00000459810	PREX1	Q8TCU6	1659 aa		32.21	■■■□□ 2.75
SUN1-223	ENST00000459810	ESF1	Q9H501	851 aa	Known RBP	32.19	■■■□□ 2.74
SUN1-223	ENST00000459810	CHIC1	Q5VXU3	224 aa		32.18	■■■□□ 2.74
SUN1-223	ENST00000459810	RERE	Q9P2R6	1566 aa		32.18	■■■□□ 2.74
SUN1-223	ENST00000459810	SETD1B	Q9UPS6	1966 aa	Known RBP	32.17	■■■□□ 2.74
SUN1-223	ENST00000459810	TRAPPC8	Q9Y2L5	1435 aa		32.15	■■■□□ 2.74
SUN1-223	ENST00000459810	DIP2C	Q9Y2E4	1556 aa		32.15	■■■□□ 2.74
SUN1-223	ENST00000459810	AGL	P35573	1532 aa		32.13	■■■□□ 2.73
SUN1-223	ENST00000459810	PTPRT	O14522	1441 aa		32.1	■■■□□ 2.73
SUN1-223	ENST00000459810	CASKIN1	Q8WXD9	1431 aa		32.09	■■■□□ 2.73
SUN1-223	ENST00000459810	STRC	Q7RTU9	1775 aa		32.09	■■■□□ 2.73
SUN1-223	ENST00000459810	CDC42BPB	Q9Y5S2	1711 aa		32.07	■■■□□ 2.72
SUN1-223	ENST00000459810	CCDC18	Q5T9S5	1454 aa		32.06	■■■□□ 2.72
SUN1-223	ENST00000459810	CNTLN	Q9NXG0	1405 aa		32.04	■■■□□ 2.72
SUN1-223	ENST00000459810	ABCC1	P33527	1531 aa		32.04	■■■□□ 2.72
SUN1-223	ENST00000459810	ABCA6	Q8N139	1617 aa		32.04	■■■□□ 2.72
SUN1-223	ENST00000459810	LRRIQ1	Q96JM4	1722 aa		32.03	■■■□□ 2.72
SUN1-223	ENST00000459810	PREX2	Q70Z35	1606 aa		32	■■■□□ 2.71
SUN1-223	ENST00000459810	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.99	■■■□□ 2.71
SUN1-223	ENST00000459810	C3	P01024	1663 aa		31.98	■■■□□ 2.71
SUN1-223	ENST00000459810	DISP3	Q9P2K9	1392 aa		31.96	■■■□□ 2.71
SUN1-223	ENST00000459810	SPAG9	O60271	1321 aa	Known RBP	31.95	■■■□□ 2.7
SUN1-223	ENST00000459810	ZMYM3	Q14202	1370 aa		31.94	■■■□□ 2.7
SUN1-223	ENST00000459810	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.94	■■■□□ 2.7
SUN1-223	ENST00000459810	KIDINS220	Q9ULH0	1771 aa		31.93	■■■□□ 2.7
SUN1-223	ENST00000459810	NPAT	Q14207	1427 aa		31.92	■■■□□ 2.7
SUN1-223	ENST00000459810	ILDR2	Q71H61	639 aa		31.92	■■■□□ 2.7
SUN1-223	ENST00000459810	ITSN2	Q9NZM3	1697 aa		31.92	■■■□□ 2.7
SUN1-223	ENST00000459810	NCOA1	Q15788	1441 aa		31.92	■■■□□ 2.7
SUN1-223	ENST00000459810	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.9	■■■□□ 2.7
SUN1-223	ENST00000459810	SAMD9L	Q8IVG5	1584 aa		31.88	■■■□□ 2.69
SUN1-223	ENST00000459810	LTBP4	Q8N2S1	1624 aa		31.88	■■■□□ 2.69
SUN1-223	ENST00000459810	FYCO1	Q9BQS8	1478 aa		31.87	■■■□□ 2.69
SUN1-223	ENST00000459810	KIAA1107	Q9UPP5	1409 aa		31.87	■■■□□ 2.69
SUN1-223	ENST00000459810	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.87	■■■□□ 2.69
SUN1-223	ENST00000459810	IQSEC2	Q5JU85	1478 aa		31.85	■■■□□ 2.69
SUN1-223	ENST00000459810	CDC42BPA	Q5VT25	1732 aa		31.84	■■■□□ 2.69
SUN1-223	ENST00000459810	SOCS7	O14512	581 aa		31.84	■■■□□ 2.69
SUN1-223	ENST00000459810	PPP6R1	Q9UPN7	881 aa		31.83	■■■□□ 2.69
SUN1-223	ENST00000459810	NCKAP5L	Q9HCH0	1330 aa		31.8	■■■□□ 2.68
SUN1-223	ENST00000459810	PLEKHH2	Q8IVE3	1493 aa		31.79	■■■□□ 2.68
SUN1-223	ENST00000459810	PKD2	Q13563	968 aa		31.79	■■■□□ 2.68
SUN1-223	ENST00000459810	GGT6	Q6P531	493 aa		31.78	■■■□□ 2.68
SUN1-223	ENST00000459810	SYCP2	Q9BX26	1530 aa		31.78	■■■□□ 2.68
SUN1-223	ENST00000459810	CAMSAP1	Q5T5Y3	1602 aa		31.77	■■■□□ 2.68
SUN1-223	ENST00000459810	CCNB3	Q8WWL7	1395 aa		31.77	■■■□□ 2.68
SUN1-223	ENST00000459810	MROH2A	A6NES4	1674 aa		31.76	■■■□□ 2.68
SUN1-223	ENST00000459810	A2M	P01023	1474 aa		31.76	■■■□□ 2.67
SUN1-223	ENST00000459810	ATP7A	Q04656	1500 aa		31.72	■■■□□ 2.67
SUN1-223	ENST00000459810	PTPRK	Q15262	1439 aa		31.72	■■■□□ 2.67
SUN1-223	ENST00000459810	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.71	■■■□□ 2.67
SUN1-223	ENST00000459810	MTUS2	Q5JR59	1369 aa		31.68	■■■□□ 2.66
SUN1-223	ENST00000459810	PLA2R1	Q13018	1463 aa		31.68	■■■□□ 2.66
SUN1-223	ENST00000459810	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.67	■■■□□ 2.66
SUN1-223	ENST00000459810	PLXNC1	O60486	1568 aa		31.67	■■■□□ 2.66
SUN1-223	ENST00000459810	UBAP1L	F5GYI3	381 aa		31.65	■■■□□ 2.66
SUN1-223	ENST00000459810	ZNF644	Q9H582	1327 aa	Predicted RBP	31.65	■■■□□ 2.66
SUN1-223	ENST00000459810	INO80	Q9ULG1	1556 aa	Predicted RBP	31.64	■■■□□ 2.65
SUN1-223	ENST00000459810	TCOF1	Q13428	1488 aa	Known RBP	31.63	■■■□□ 2.65
SUN1-223	ENST00000459810	CLTC	Q00610	1675 aa	Known RBP	31.6	■■■□□ 2.65
SUN1-223	ENST00000459810	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.6	■■■□□ 2.65
SUN1-223	ENST00000459810	MBD5	Q9P267	1494 aa		31.59	■■■□□ 2.65
SUN1-223	ENST00000459810	DHX29	Q7Z478	1369 aa	Known RBP	31.58	■■■□□ 2.65
SUN1-223	ENST00000459810	SPATA31D1	Q6ZQQ2	1576 aa		31.57	■■■□□ 2.64
SUN1-223	ENST00000459810	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.56	■■■□□ 2.64
SUN1-223	ENST00000459810	RSPH4A	Q5TD94	716 aa		31.54	■■■□□ 2.64
SUN1-223	ENST00000459810	ZNF142	P52746	1687 aa	Predicted RBP	31.54	■■■□□ 2.64
SUN1-223	ENST00000459810	MYO3A	Q8NEV4	1616 aa		31.53	■■■□□ 2.64
SUN1-223	ENST00000459810	A2ML1	A8K2U0	1454 aa		31.52	■■■□□ 2.64
SUN1-223	ENST00000459810	KIF3B	O15066	747 aa		31.51	■■■□□ 2.63
SUN1-223	ENST00000459810	ADGB	Q8N7X0	1667 aa		31.49	■■■□□ 2.63
SUN1-223	ENST00000459810	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.49	■■■□□ 2.63
SUN1-223	ENST00000459810	CEP162	Q5TB80	1403 aa		31.49	■■■□□ 2.63
SUN1-223	ENST00000459810	TIAM1	Q13009	1591 aa		31.45	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms