RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 SCAPERQ9BY12 1400 aa33.48■■■□□ 2.95
CHRD-207ENST00000459711 MLECQ14165 292 aa33.47■■■□□ 2.95
CHRD-207ENST00000459711 CERKQ8TCT0 537 aa33.44■■■□□ 2.94
CHRD-207ENST00000459711 ARHGEF12Q9NZN5 1544 aa33.43■■■□□ 2.94
CHRD-207ENST00000459711 ATP10AO60312 1499 aa33.4■■■□□ 2.94
CHRD-207ENST00000459711 C9orf84Q5VXU9 1444 aa33.38■■■□□ 2.93
CHRD-207ENST00000459711 PREX1Q8TCU6 1659 aa33.36■■■□□ 2.93
CHRD-207ENST00000459711 MYO5CQ9NQX4 1742 aa33.35■■■□□ 2.93
CHRD-207ENST00000459711 EFCAB2Q5VUJ9 269 aa33.32■■■□□ 2.92
CHRD-207ENST00000459711 FMN1Q68DA7 1419 aa33.28■■■□□ 2.92
CHRD-207ENST00000459711 ZNF518AQ6AHZ1 1483 aa33.26■■■□□ 2.92
CHRD-207ENST00000459711 CEBPAP49715 358 aaPredicted RBP33.25■■■□□ 2.91
CHRD-207ENST00000459711 KIF14Q15058 1648 aa33.24■■■□□ 2.91
CHRD-207ENST00000459711 KDM5CP41229 1560 aa33.24■■■□□ 2.91
CHRD-207ENST00000459711 CDK11AQ9UQ88 783 aaPredicted RBP33.23■■■□□ 2.91
CHRD-207ENST00000459711 ATP1B4Q9UN42 357 aaPredicted RBP33.22■■■□□ 2.91
CHRD-207ENST00000459711 STRCQ7RTU9 1775 aa33.21■■■□□ 2.91
CHRD-207ENST00000459711 SETD1BQ9UPS6 1966 aaKnown RBP33.19■■■□□ 2.9
CHRD-207ENST00000459711 ARHGAP35Q9NRY4 1499 aa33.18■■■□□ 2.9
CHRD-207ENST00000459711 ARHGAP5Q13017 1502 aa33.18■■■□□ 2.9
CHRD-207ENST00000459711 DMRT2Q9Y5R5 561 aa33.18■■■□□ 2.9
CHRD-207ENST00000459711 TROQ12816 1431 aaPredicted RBP33.18■■■□□ 2.9
CHRD-207ENST00000459711 UHRF1BP1Q6BDS2 1440 aa33.18■■■□□ 2.9
CHRD-207ENST00000459711 AFAP1Q8N556 730 aa33.17■■■□□ 2.9
CHRD-207ENST00000459711 DIP2CQ9Y2E4 1556 aa33.16■■■□□ 2.9
CHRD-207ENST00000459711 REREQ9P2R6 1566 aa33.15■■■□□ 2.9
CHRD-207ENST00000459711 CLIP1P30622 1438 aa33.11■■■□□ 2.89
CHRD-207ENST00000459711 UBTFP17480 764 aaKnown RBP33.11■■■□□ 2.89
CHRD-207ENST00000459711 ABCA6Q8N139 1617 aa33.09■■■□□ 2.89
CHRD-207ENST00000459711 MLH3Q9UHC1 1453 aa33.08■■■□□ 2.89
CHRD-207ENST00000459711 MYT1LQ9UL68 1186 aa33.07■■■□□ 2.88
CHRD-207ENST00000459711 CDC42BPBQ9Y5S2 1711 aa33.07■■■□□ 2.88
CHRD-207ENST00000459711 C3P01024 1663 aa33.07■■■□□ 2.88
CHRD-207ENST00000459711 LRRIQ1Q96JM4 1722 aa33.06■■■□□ 2.88
CHRD-207ENST00000459711 EHMT2Q96KQ7 1210 aa33.05■■■□□ 2.88
CHRD-207ENST00000459711 AGLP35573 1532 aa33.04■■■□□ 2.88
CHRD-207ENST00000459711 DISP3Q9P2K9 1392 aa33.04■■■□□ 2.88
CHRD-207ENST00000459711 PTPRTO14522 1441 aa33.03■■■□□ 2.88
CHRD-207ENST00000459711 PREX2Q70Z35 1606 aa33■■■□□ 2.87
CHRD-207ENST00000459711 ABCC1P33527 1531 aa33■■■□□ 2.87
CHRD-207ENST00000459711 TRAPPC8Q9Y2L5 1435 aa32.99■■■□□ 2.87
CHRD-207ENST00000459711 ILDR2Q71H61 639 aa32.98■■■□□ 2.87
CHRD-207ENST00000459711 ITSN2Q9NZM3 1697 aa32.96■■■□□ 2.87
CHRD-207ENST00000459711 ESF1Q9H501 851 aaKnown RBP32.94■■■□□ 2.86
CHRD-207ENST00000459711 KIDINS220Q9ULH0 1771 aa32.92■■■□□ 2.86
CHRD-207ENST00000459711 LTBP4Q8N2S1 1624 aa32.91■■■□□ 2.86
CHRD-207ENST00000459711 CNTLNQ9NXG0 1405 aa32.91■■■□□ 2.86
CHRD-207ENST00000459711 SOCS7O14512 581 aa32.89■■■□□ 2.86
CHRD-207ENST00000459711 CCDC18Q5T9S5 1454 aa32.88■■■□□ 2.85
CHRD-207ENST00000459711 NCOA1Q15788 1441 aa32.88■■■□□ 2.85
CHRD-207ENST00000459711 IQSEC2Q5JU85 1478 aa32.86■■■□□ 2.85
CHRD-207ENST00000459711 CASKIN1Q8WXD9 1431 aa32.85■■■□□ 2.85
CHRD-207ENST00000459711 SPATA31D1Q6ZQQ2 1576 aa32.85■■■□□ 2.85
CHRD-207ENST00000459711 CDC42BPAQ5VT25 1732 aa32.85■■■□□ 2.85
CHRD-207ENST00000459711 MROH2AA6NES4 1674 aa32.81■■■□□ 2.84
CHRD-207ENST00000459711 SAMD9LQ8IVG5 1584 aa32.8■■■□□ 2.84
CHRD-207ENST00000459711 NPATQ14207 1427 aa32.8■■■□□ 2.84
CHRD-207ENST00000459711 CAMSAP1Q5T5Y3 1602 aa32.77■■■□□ 2.84
CHRD-207ENST00000459711 ZMYM3Q14202 1370 aa32.72■■■□□ 2.83
CHRD-207ENST00000459711 SYCP2Q9BX26 1530 aa32.72■■■□□ 2.83
CHRD-207ENST00000459711 FYCO1Q9BQS8 1478 aa32.69■■■□□ 2.82
CHRD-207ENST00000459711 SUPT6HQ7KZ85 1726 aaKnown RBP32.68■■■□□ 2.82
CHRD-207ENST00000459711 ZNF777Q9ULD5 760 aaPredicted RBP32.68■■■□□ 2.82
CHRD-207ENST00000459711 SPAG9O60271 1321 aaKnown RBP32.68■■■□□ 2.82
CHRD-207ENST00000459711 GPATCH8Q9UKJ3 1502 aaKnown RBP32.67■■■□□ 2.82
CHRD-207ENST00000459711 CHIC1Q5VXU3 224 aa32.65■■■□□ 2.82
CHRD-207ENST00000459711 ATP7AQ04656 1500 aa32.65■■■□□ 2.82
CHRD-207ENST00000459711 PLXNC1O60486 1568 aa32.65■■■□□ 2.82
CHRD-207ENST00000459711 ZNF142P52746 1687 aaPredicted RBP32.65■■■□□ 2.82
CHRD-207ENST00000459711 CLTCQ00610 1675 aaKnown RBP32.63■■■□□ 2.81
CHRD-207ENST00000459711 NCKAP5LQ9HCH0 1330 aa32.63■■■□□ 2.81
CHRD-207ENST00000459711 MYO3AQ8NEV4 1616 aa32.62■■■□□ 2.81
CHRD-207ENST00000459711 INO80Q9ULG1 1556 aaPredicted RBP32.62■■■□□ 2.81
CHRD-207ENST00000459711 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
CHRD-207ENST00000459711 HNRNPMP52272 730 aaKnown RBP eCLIP32.62■■■□□ 2.81
CHRD-207ENST00000459711 KIAA1107Q9UPP5 1409 aa32.61■■■□□ 2.81
CHRD-207ENST00000459711 ZNF335Q9H4Z2 1342 aaPredicted RBP32.61■■■□□ 2.81
CHRD-207ENST00000459711 A2MP01023 1474 aa32.59■■■□□ 2.81
CHRD-207ENST00000459711 PLEKHH2Q8IVE3 1493 aa32.59■■■□□ 2.81
CHRD-207ENST00000459711 CEP170BQ9Y4F5 1589 aaPredicted RBP32.58■■■□□ 2.81
CHRD-207ENST00000459711 PTPRKQ15262 1439 aa32.58■■■□□ 2.81
CHRD-207ENST00000459711 TCOF1Q13428 1488 aaKnown RBP32.57■■■□□ 2.8
CHRD-207ENST00000459711 PKD2Q13563 968 aa32.57■■■□□ 2.8
CHRD-207ENST00000459711 UBAP1LF5GYI3 381 aa32.53■■■□□ 2.8
CHRD-207ENST00000459711 CFDP1Q9UEE9 299 aaPredicted RBP32.52■■■□□ 2.8
CHRD-207ENST00000459711 GGT6Q6P531 493 aa32.5■■■□□ 2.79
CHRD-207ENST00000459711 CCNB3Q8WWL7 1395 aa32.49■■■□□ 2.79
CHRD-207ENST00000459711 ADGBQ8N7X0 1667 aa32.47■■■□□ 2.79
CHRD-207ENST00000459711 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
CHRD-207ENST00000459711 A2ML1A8K2U0 1454 aa32.42■■■□□ 2.78
CHRD-207ENST00000459711 DNMT1P26358 1616 aaKnown RBP32.4■■■□□ 2.78
CHRD-207ENST00000459711 MTUS2Q5JR59 1369 aa32.39■■■□□ 2.78
CHRD-207ENST00000459711 MBD5Q9P267 1494 aa32.36■■■□□ 2.77
CHRD-207ENST00000459711 TIAM1Q13009 1591 aa32.36■■■□□ 2.77
CHRD-207ENST00000459711 ZNF644Q9H582 1327 aaPredicted RBP32.34■■■□□ 2.77
CHRD-207ENST00000459711 RTEL1-TNFRSF6BF6WH68 1400 aa32.34■■■□□ 2.77
CHRD-207ENST00000459711 POLR1AO95602 1720 aaPredicted RBP32.31■■■□□ 2.76
CHRD-207ENST00000459711 DHX29Q7Z478 1369 aaKnown RBP32.31■■■□□ 2.76
CHRD-207ENST00000459711 NEURL4Q96JN8 1562 aa32.3■■■□□ 2.76
CHRD-207ENST00000459711 CPS1P31327 1500 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms