RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 ZNF644Q9H582 1327 aaPredicted RBP15.72■□□□□ 0.11
UBE2L3-202ENST00000458578 ANP32AP39687 249 aaKnown RBP15.71■□□□□ 0.11
UBE2L3-202ENST00000458578 KIF7Q2M1P5 1343 aa15.7■□□□□ 0.1
UBE2L3-202ENST00000458578 SUPT6HQ7KZ85 1726 aaKnown RBP15.7■□□□□ 0.1
UBE2L3-202ENST00000458578 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
UBE2L3-202ENST00000458578 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
UBE2L3-202ENST00000458578 RTL5Q5HYW3 569 aaPredicted RBP15.69■□□□□ 0.1
UBE2L3-202ENST00000458578 PDS5BQ9NTI5 1447 aa15.68■□□□□ 0.1
UBE2L3-202ENST00000458578 SAMD9Q5K651 1589 aa15.68■□□□□ 0.1
UBE2L3-202ENST00000458578 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
UBE2L3-202ENST00000458578 SALL2Q9Y467 1007 aaPredicted RBP15.68■□□□□ 0.1
UBE2L3-202ENST00000458578 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
UBE2L3-202ENST00000458578 EHBP1L1Q8N3D4 1523 aa15.67■□□□□ 0.1
UBE2L3-202ENST00000458578 KDM6BO15054 1643 aa15.67■□□□□ 0.1
UBE2L3-202ENST00000458578 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
UBE2L3-202ENST00000458578 UGGT2Q9NYU1 1516 aa15.66■□□□□ 0.1
UBE2L3-202ENST00000458578 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
UBE2L3-202ENST00000458578 NCOA1Q15788 1441 aa15.65■□□□□ 0.1
UBE2L3-202ENST00000458578 DENND4BO75064 1496 aaPredicted RBP15.65■□□□□ 0.1
UBE2L3-202ENST00000458578 IPO9Q96P70 1041 aaKnown RBP15.64■□□□□ 0.09
UBE2L3-202ENST00000458578 NUDCQ9Y266 331 aa15.63■□□□□ 0.09
UBE2L3-202ENST00000458578 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
UBE2L3-202ENST00000458578 RTN4Q9NQC3 1192 aaKnown RBP15.63■□□□□ 0.09
UBE2L3-202ENST00000458578 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
UBE2L3-202ENST00000458578 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
UBE2L3-202ENST00000458578 FBLN2P98095 1184 aa15.6■□□□□ 0.09
UBE2L3-202ENST00000458578 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
UBE2L3-202ENST00000458578 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
UBE2L3-202ENST00000458578 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
UBE2L3-202ENST00000458578 ANO8Q9HCE9 1232 aaPredicted RBP15.57■□□□□ 0.08
UBE2L3-202ENST00000458578 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
UBE2L3-202ENST00000458578 IL27Q8NEV9 243 aa15.55■□□□□ 0.08
UBE2L3-202ENST00000458578 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
UBE2L3-202ENST00000458578 HECW1Q76N89 1606 aa15.55■□□□□ 0.08
UBE2L3-202ENST00000458578 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
UBE2L3-202ENST00000458578 CFDP1Q9UEE9 299 aaPredicted RBP15.54■□□□□ 0.08
UBE2L3-202ENST00000458578 TCOF1Q13428 1488 aaKnown RBP15.54■□□□□ 0.08
UBE2L3-202ENST00000458578 EXOC6Q8TAG9 804 aa15.53■□□□□ 0.08
UBE2L3-202ENST00000458578 ANKRD30BQ9BXX2 1392 aa15.53■□□□□ 0.08
UBE2L3-202ENST00000458578 TARBP1Q13395 1621 aaKnown RBP15.52■□□□□ 0.08
UBE2L3-202ENST00000458578 DAPK1P53355 1430 aa15.52■□□□□ 0.07
UBE2L3-202ENST00000458578 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
UBE2L3-202ENST00000458578 ZNF608Q9ULD9 1512 aaPredicted RBP15.51■□□□□ 0.07
UBE2L3-202ENST00000458578 ABCC5O15440 1437 aa15.51■□□□□ 0.07
UBE2L3-202ENST00000458578 NEFMP07197 916 aa15.51■□□□□ 0.07
UBE2L3-202ENST00000458578 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
UBE2L3-202ENST00000458578 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
UBE2L3-202ENST00000458578 USP47Q96K76 1375 aa15.5■□□□□ 0.07
UBE2L3-202ENST00000458578 PKD2Q13563 968 aa15.49■□□□□ 0.07
UBE2L3-202ENST00000458578 PNISRQ8TF01 805 aaKnown RBP15.49■□□□□ 0.07
UBE2L3-202ENST00000458578 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
UBE2L3-202ENST00000458578 RPRD2Q5VT52 1461 aaKnown RBP15.49■□□□□ 0.07
UBE2L3-202ENST00000458578 GCC2Q8IWJ2 1684 aa15.49■□□□□ 0.07
UBE2L3-202ENST00000458578 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
UBE2L3-202ENST00000458578 PRG4Q92954 1404 aaPredicted RBP15.48■□□□□ 0.07
UBE2L3-202ENST00000458578 WDR62O43379 1518 aa15.47■□□□□ 0.07
UBE2L3-202ENST00000458578 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
UBE2L3-202ENST00000458578 TEX14Q8IWB6 1497 aa15.47■□□□□ 0.07
UBE2L3-202ENST00000458578 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
UBE2L3-202ENST00000458578 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
UBE2L3-202ENST00000458578 CHMP7Q8WUX9 453 aaPredicted RBP15.46■□□□□ 0.07
UBE2L3-202ENST00000458578 PDE4AP27815 886 aa15.45■□□□□ 0.06
UBE2L3-202ENST00000458578 PLIN1O60240 522 aa15.45■□□□□ 0.06
UBE2L3-202ENST00000458578 RRP1P56182 461 aaKnown RBP15.45■□□□□ 0.06
UBE2L3-202ENST00000458578 CARD11Q9BXL7 1154 aa15.45■□□□□ 0.06
UBE2L3-202ENST00000458578 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
UBE2L3-202ENST00000458578 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
UBE2L3-202ENST00000458578 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
UBE2L3-202ENST00000458578 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
UBE2L3-202ENST00000458578 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
UBE2L3-202ENST00000458578 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
UBE2L3-202ENST00000458578 CDCA7LQ96GN5 454 aa15.41■□□□□ 0.06
UBE2L3-202ENST00000458578 DISP1Q96F81 1524 aa15.4■□□□□ 0.06
UBE2L3-202ENST00000458578 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
UBE2L3-202ENST00000458578 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
UBE2L3-202ENST00000458578 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
UBE2L3-202ENST00000458578 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
UBE2L3-202ENST00000458578 BCORL1Q5H9F3 1711 aa15.38■□□□□ 0.05
UBE2L3-202ENST00000458578 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
UBE2L3-202ENST00000458578 NUP155O75694 1391 aa15.37■□□□□ 0.05
UBE2L3-202ENST00000458578 PZPP20742 1482 aa15.36■□□□□ 0.05
UBE2L3-202ENST00000458578 DCAF11Q8TEB1 546 aa15.36■□□□□ 0.05
UBE2L3-202ENST00000458578 BACH2Q9BYV9 841 aa15.36■□□□□ 0.05
UBE2L3-202ENST00000458578 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
UBE2L3-202ENST00000458578 CAMSAP2Q08AD1 1489 aa15.36■□□□□ 0.05
UBE2L3-202ENST00000458578 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.053e-7■■■■□ 23.5
UBE2L3-202ENST00000458578 KIAA0556O60303 1618 aa15.35■□□□□ 0.05
UBE2L3-202ENST00000458578 PLEKHD1A6NEE1 506 aa15.35■□□□□ 0.05
UBE2L3-202ENST00000458578 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
UBE2L3-202ENST00000458578 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
UBE2L3-202ENST00000458578 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
UBE2L3-202ENST00000458578 CC2D1BQ5T0F9 858 aaKnown RBP15.34■□□□□ 0.05
UBE2L3-202ENST00000458578 KIF15Q9NS87 1388 aa15.34■□□□□ 0.05
UBE2L3-202ENST00000458578 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
UBE2L3-202ENST00000458578 TSPY4P0CV99 314 aa15.33■□□□□ 0.04
UBE2L3-202ENST00000458578 TSPY10P0CW01 314 aa15.33■□□□□ 0.04
UBE2L3-202ENST00000458578 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.04
UBE2L3-202ENST00000458578 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
UBE2L3-202ENST00000458578 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
UBE2L3-202ENST00000458578 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms