RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 HDGFP51858 240 aaKnown RBP12.92□□□□□ -0.34
MSC-AS1-201ENST00000457356 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
MSC-AS1-201ENST00000457356 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
MSC-AS1-201ENST00000457356 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
MSC-AS1-201ENST00000457356 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
MSC-AS1-201ENST00000457356 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
MSC-AS1-201ENST00000457356 HAP1P54257 671 aaPredicted RBP12.9□□□□□ -0.34
MSC-AS1-201ENST00000457356 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
MSC-AS1-201ENST00000457356 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
MSC-AS1-201ENST00000457356 RSPH4AQ5TD94 716 aa12.89□□□□□ -0.35
MSC-AS1-201ENST00000457356 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
MSC-AS1-201ENST00000457356 NOP58Q9Y2X3 529 aaKnown RBP12.88□□□□□ -0.35
MSC-AS1-201ENST00000457356 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
MSC-AS1-201ENST00000457356 TRIM44Q96DX7 344 aaPredicted RBP12.86□□□□□ -0.35
MSC-AS1-201ENST00000457356 ERICH6BQ5W0A0 696 aa12.86□□□□□ -0.35
MSC-AS1-201ENST00000457356 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
MSC-AS1-201ENST00000457356 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
MSC-AS1-201ENST00000457356 A0A0G2JS52 829 aa12.83□□□□□ -0.36
MSC-AS1-201ENST00000457356 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
MSC-AS1-201ENST00000457356 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
MSC-AS1-201ENST00000457356 POGKQ9P215 609 aa12.83□□□□□ -0.36
MSC-AS1-201ENST00000457356 ANKRD30AQ9BXX3 1397 aa12.82□□□□□ -0.36
MSC-AS1-201ENST00000457356 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
MSC-AS1-201ENST00000457356 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
MSC-AS1-201ENST00000457356 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
MSC-AS1-201ENST00000457356 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
MSC-AS1-201ENST00000457356 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
MSC-AS1-201ENST00000457356 RAPGEF3O95398 923 aa12.8□□□□□ -0.36
MSC-AS1-201ENST00000457356 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
MSC-AS1-201ENST00000457356 MSH5O43196 834 aa12.79□□□□□ -0.36
MSC-AS1-201ENST00000457356 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
MSC-AS1-201ENST00000457356 NUP155O75694 1391 aa12.78□□□□□ -0.36
MSC-AS1-201ENST00000457356 RGS3P49796 1198 aa12.78□□□□□ -0.36
MSC-AS1-201ENST00000457356 BECN1Q14457 450 aa12.77□□□□□ -0.36
MSC-AS1-201ENST00000457356 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.36
MSC-AS1-201ENST00000457356 PKD2Q13563 968 aa12.77□□□□□ -0.37
MSC-AS1-201ENST00000457356 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
MSC-AS1-201ENST00000457356 STK26Q9P289 416 aa12.74□□□□□ -0.37
MSC-AS1-201ENST00000457356 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
MSC-AS1-201ENST00000457356 NUTM2DQ5VT03 806 aaPredicted RBP12.73□□□□□ -0.37
MSC-AS1-201ENST00000457356 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
MSC-AS1-201ENST00000457356 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
MSC-AS1-201ENST00000457356 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
MSC-AS1-201ENST00000457356 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
MSC-AS1-201ENST00000457356 PRXQ9BXM0 1461 aa12.71□□□□□ -0.37
MSC-AS1-201ENST00000457356 FOXD1Q16676 465 aa12.71□□□□□ -0.37
MSC-AS1-201ENST00000457356 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
MSC-AS1-201ENST00000457356 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.38
MSC-AS1-201ENST00000457356 WDR62O43379 1518 aa12.7□□□□□ -0.38
MSC-AS1-201ENST00000457356 IQGAP2Q13576 1575 aa12.7□□□□□ -0.38
MSC-AS1-201ENST00000457356 DNTTIP2Q5QJE6 756 aaKnown RBP12.7□□□□□ -0.38
MSC-AS1-201ENST00000457356 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
MSC-AS1-201ENST00000457356 ARHGAP5Q13017 1502 aa12.68□□□□□ -0.38
MSC-AS1-201ENST00000457356 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
MSC-AS1-201ENST00000457356 PTMAP06454 111 aaKnown RBP12.67□□□□□ -0.38
MSC-AS1-201ENST00000457356 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
MSC-AS1-201ENST00000457356 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
MSC-AS1-201ENST00000457356 GOLGA6L22H0YM25 854 aa12.66□□□□□ -0.38
MSC-AS1-201ENST00000457356 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
MSC-AS1-201ENST00000457356 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
MSC-AS1-201ENST00000457356 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
MSC-AS1-201ENST00000457356 CUL7Q14999 1698 aa12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 MPHOSPH9Q99550 1183 aa12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 PKNOX2Q96KN3 472 aa12.62□□□□□ -0.39
MSC-AS1-201ENST00000457356 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
MSC-AS1-201ENST00000457356 TROQ12816 1431 aaPredicted RBP12.61□□□□□ -0.39
MSC-AS1-201ENST00000457356 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
MSC-AS1-201ENST00000457356 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
MSC-AS1-201ENST00000457356 SOX12O15370 315 aa12.6□□□□□ -0.39
MSC-AS1-201ENST00000457356 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
MSC-AS1-201ENST00000457356 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
MSC-AS1-201ENST00000457356 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 SETD5Q9C0A6 1442 aa12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 KIF15Q9NS87 1388 aa12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
MSC-AS1-201ENST00000457356 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
MSC-AS1-201ENST00000457356 KIF21BO75037 1637 aa12.57□□□□□ -0.4
MSC-AS1-201ENST00000457356 ARID3AQ99856 593 aa12.57□□□□□ -0.4
MSC-AS1-201ENST00000457356 GZF1Q9H116 711 aaPredicted RBP12.57□□□□□ -0.4
MSC-AS1-201ENST00000457356 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
MSC-AS1-201ENST00000457356 FANCIQ9NVI1 1328 aa12.55□□□□□ -0.4
MSC-AS1-201ENST00000457356 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
MSC-AS1-201ENST00000457356 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
MSC-AS1-201ENST00000457356 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
MSC-AS1-201ENST00000457356 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
MSC-AS1-201ENST00000457356 UBE2Q2Q8WVN8 375 aa12.54□□□□□ -0.4
MSC-AS1-201ENST00000457356 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
MSC-AS1-201ENST00000457356 CDK13Q14004 1512 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms