RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
ERCC3-204ENST00000456257 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
ERCC3-204ENST00000456257 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
ERCC3-204ENST00000456257 NAIPQ13075 1403 aa11.16□□□□□ -0.62
ERCC3-204ENST00000456257 KIF14Q15058 1648 aa11.14□□□□□ -0.63
ERCC3-204ENST00000456257 KIAA1107Q9UPP5 1409 aa11.14□□□□□ -0.63
ERCC3-204ENST00000456257 PLCH2O75038 1416 aa11.13□□□□□ -0.63
ERCC3-204ENST00000456257 DAPK1P53355 1430 aa11.13□□□□□ -0.63
ERCC3-204ENST00000456257 ITGAEP38570 1179 aa11.13□□□□□ -0.63
ERCC3-204ENST00000456257 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
ERCC3-204ENST00000456257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
ERCC3-204ENST00000456257 ZCCHC11Q5TAX3 1644 aaKnown RBP11.12□□□□□ -0.63
ERCC3-204ENST00000456257 ARAP3Q8WWN8 1544 aa11.11□□□□□ -0.63
ERCC3-204ENST00000456257 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
ERCC3-204ENST00000456257 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
ERCC3-204ENST00000456257 NCOA1Q15788 1441 aa11.1□□□□□ -0.63
ERCC3-204ENST00000456257 DNMT1P26358 1616 aaKnown RBP11.1□□□□□ -0.63
ERCC3-204ENST00000456257 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
ERCC3-204ENST00000456257 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
ERCC3-204ENST00000456257 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
ERCC3-204ENST00000456257 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
ERCC3-204ENST00000456257 ARHGEF5Q12774 1597 aa11.08□□□□□ -0.64
ERCC3-204ENST00000456257 PLEKHH2Q8IVE3 1493 aa11.08□□□□□ -0.64
ERCC3-204ENST00000456257 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
ERCC3-204ENST00000456257 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
ERCC3-204ENST00000456257 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
ERCC3-204ENST00000456257 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
ERCC3-204ENST00000456257 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
ERCC3-204ENST00000456257 ADRA2BP18089 450 aa11.06□□□□□ -0.64
ERCC3-204ENST00000456257 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
ERCC3-204ENST00000456257 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
ERCC3-204ENST00000456257 RRP7BPQ9NSQ0 103 aa11.05□□□□□ -0.64
ERCC3-204ENST00000456257 ANKRD30AQ9BXX3 1397 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 CDC42BPBQ9Y5S2 1711 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 TTC37Q6PGP7 1564 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 TSPY4P0CV99 314 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 TSPY10P0CW01 314 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
ERCC3-204ENST00000456257 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
ERCC3-204ENST00000456257 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-204ENST00000456257 MAPKBP1O60336 1514 aa11.03□□□□□ -0.64
ERCC3-204ENST00000456257 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
ERCC3-204ENST00000456257 ABCA9Q8IUA7 1624 aa11.02□□□□□ -0.64
ERCC3-204ENST00000456257 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
ERCC3-204ENST00000456257 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
ERCC3-204ENST00000456257 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
ERCC3-204ENST00000456257 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
ERCC3-204ENST00000456257 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
ERCC3-204ENST00000456257 CCDC141Q6ZP82 1450 aa11□□□□□ -0.65
ERCC3-204ENST00000456257 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
ERCC3-204ENST00000456257 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
ERCC3-204ENST00000456257 DENND4BO75064 1496 aaPredicted RBP10.99□□□□□ -0.65
ERCC3-204ENST00000456257 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
ERCC3-204ENST00000456257 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 MYO5CQ9NQX4 1742 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 ANKRD50Q9ULJ7 1429 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
ERCC3-204ENST00000456257 KDM6BO15054 1643 aa10.96□□□□□ -0.65
ERCC3-204ENST00000456257 GLI2P10070 1586 aa10.96□□□□□ -0.65
ERCC3-204ENST00000456257 ABCC1P33527 1531 aa10.96□□□□□ -0.65
ERCC3-204ENST00000456257 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
ERCC3-204ENST00000456257 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
ERCC3-204ENST00000456257 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
ERCC3-204ENST00000456257 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
ERCC3-204ENST00000456257 FANCAO15360 1455 aa10.94□□□□□ -0.66
ERCC3-204ENST00000456257 ANKRD30BQ9BXX2 1392 aa10.94□□□□□ -0.66
ERCC3-204ENST00000456257 ADGBQ8N7X0 1667 aa10.94□□□□□ -0.66
ERCC3-204ENST00000456257 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
ERCC3-204ENST00000456257 PZPP20742 1482 aa10.93□□□□□ -0.66
ERCC3-204ENST00000456257 PLXNC1O60486 1568 aa10.92□□□□□ -0.66
ERCC3-204ENST00000456257 PPP1R15AO75807 674 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-204ENST00000456257 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
ERCC3-204ENST00000456257 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
ERCC3-204ENST00000456257 NEO1Q92859 1461 aa10.92□□□□□ -0.66
ERCC3-204ENST00000456257 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
ERCC3-204ENST00000456257 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
ERCC3-204ENST00000456257 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.66
ERCC3-204ENST00000456257 DUOX2Q9NRD8 1548 aa10.9□□□□□ -0.66
ERCC3-204ENST00000456257 SLC4A1APQ9BWU0 796 aaKnown RBP10.89□□□□□ -0.67
ERCC3-204ENST00000456257 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
ERCC3-204ENST00000456257 MLH3Q9UHC1 1453 aa10.88□□□□□ -0.67
ERCC3-204ENST00000456257 DHX29Q7Z478 1369 aaKnown RBP10.88□□□□□ -0.67
ERCC3-204ENST00000456257 ADGRL1O94910 1474 aa10.87□□□□□ -0.67
ERCC3-204ENST00000456257 NUP155O75694 1391 aa10.87□□□□□ -0.67
ERCC3-204ENST00000456257 MAGI2Q86UL8 1455 aa10.87□□□□□ -0.67
ERCC3-204ENST00000456257 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
ERCC3-204ENST00000456257 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
ERCC3-204ENST00000456257 ZNF518AQ6AHZ1 1483 aa10.86□□□□□ -0.67
ERCC3-204ENST00000456257 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
ERCC3-204ENST00000456257 PKD2Q13563 968 aa10.85□□□□□ -0.67
ERCC3-204ENST00000456257 RPRD2Q5VT52 1461 aaKnown RBP10.85□□□□□ -0.67
ERCC3-204ENST00000456257 KDM5CP41229 1560 aa10.85□□□□□ -0.67
ERCC3-204ENST00000456257 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
ERCC3-204ENST00000456257 ZFYVE16Q7Z3T8 1539 aa10.84□□□□□ -0.67
ERCC3-204ENST00000456257 NEUROD1Q13562 356 aa10.84□□□□□ -0.67
ERCC3-204ENST00000456257 ATP10AO60312 1499 aa10.84□□□□□ -0.67
ERCC3-204ENST00000456257 INO80Q9ULG1 1556 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms