RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
SCN5A-210ENST00000455624 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
SCN5A-210ENST00000455624 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
SCN5A-210ENST00000455624 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
SCN5A-210ENST00000455624 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
SCN5A-210ENST00000455624 SPRYD3Q8NCJ5 442 aa12.87□□□□□ -0.35
SCN5A-210ENST00000455624 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
SCN5A-210ENST00000455624 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
SCN5A-210ENST00000455624 PRM3Q9NNZ6 103 aa12.86□□□□□ -0.35
SCN5A-210ENST00000455624 STK26Q9P289 416 aa12.85□□□□□ -0.35
SCN5A-210ENST00000455624 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
SCN5A-210ENST00000455624 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
SCN5A-210ENST00000455624 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
SCN5A-210ENST00000455624 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
SCN5A-210ENST00000455624 APBB1O00213 710 aa12.83□□□□□ -0.36
SCN5A-210ENST00000455624 G3V3G9 751 aa12.82□□□□□ -0.36
SCN5A-210ENST00000455624 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
SCN5A-210ENST00000455624 RTN4Q9NQC3 1192 aaKnown RBP12.82□□□□□ -0.36
SCN5A-210ENST00000455624 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
SCN5A-210ENST00000455624 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
SCN5A-210ENST00000455624 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 IPO8O15397 1037 aaKnown RBP12.79□□□□□ -0.36
SCN5A-210ENST00000455624 KTN1Q86UP2 1357 aaKnown RBP12.79□□□□□ -0.36
SCN5A-210ENST00000455624 TPM4P67936 248 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 PTMSP20962 102 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 TAF7LQ5H9L4 462 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 GPATCH3Q96I76 525 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 GORABQ5T7V8 394 aa12.79□□□□□ -0.36
SCN5A-210ENST00000455624 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
SCN5A-210ENST00000455624 HTATSF1O43719 755 aaKnown RBP12.78□□□□□ -0.36
SCN5A-210ENST00000455624 GGT6Q6P531 493 aa12.78□□□□□ -0.36
SCN5A-210ENST00000455624 ITPRIPQ8IWB1 547 aa12.77□□□□□ -0.36
SCN5A-210ENST00000455624 TNIKQ9UKE5 1360 aa12.77□□□□□ -0.36
SCN5A-210ENST00000455624 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
SCN5A-210ENST00000455624 ARHGAP35Q9NRY4 1499 aa12.76□□□□□ -0.37
SCN5A-210ENST00000455624 NACADO15069 1562 aa12.76□□□□□ -0.37
SCN5A-210ENST00000455624 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
SCN5A-210ENST00000455624 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
SCN5A-210ENST00000455624 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
SCN5A-210ENST00000455624 PDE4CQ08493 712 aa12.73□□□□□ -0.37
SCN5A-210ENST00000455624 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
SCN5A-210ENST00000455624 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
SCN5A-210ENST00000455624 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-210ENST00000455624 RASSF8Q8NHQ8 419 aa12.71□□□□□ -0.37
SCN5A-210ENST00000455624 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
SCN5A-210ENST00000455624 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
SCN5A-210ENST00000455624 CUX2O14529 1486 aa12.71□□□□□ -0.38
SCN5A-210ENST00000455624 CARMIL2Q6F5E8 1435 aa12.71□□□□□ -0.38
SCN5A-210ENST00000455624 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 HSPA5P11021 654 aaKnown RBP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 TRIM6-TRIM34B2RNG4 842 aa12.7□□□□□ -0.38
SCN5A-210ENST00000455624 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
SCN5A-210ENST00000455624 CHMP4AQ9BY43 222 aa12.69□□□□□ -0.38
SCN5A-210ENST00000455624 EID1Q9Y6B2 187 aa12.69□□□□□ -0.38
SCN5A-210ENST00000455624 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 PKD2Q13563 968 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
SCN5A-210ENST00000455624 MARCH6O60337 910 aa12.67□□□□□ -0.38
SCN5A-210ENST00000455624 FRAT2O75474 233 aaPredicted RBP12.66□□□□□ -0.38
SCN5A-210ENST00000455624 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
SCN5A-210ENST00000455624 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
SCN5A-210ENST00000455624 HMMRO75330 724 aa12.65□□□□□ -0.38
SCN5A-210ENST00000455624 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
SCN5A-210ENST00000455624 MFAP1P55081 439 aaKnown RBP12.65□□□□□ -0.39
SCN5A-210ENST00000455624 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
SCN5A-210ENST00000455624 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
SCN5A-210ENST00000455624 NGDNQ8NEJ9 315 aaKnown RBP12.64□□□□□ -0.39
SCN5A-210ENST00000455624 RALBP1Q15311 655 aa12.64□□□□□ -0.39
SCN5A-210ENST00000455624 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
SCN5A-210ENST00000455624 AMPHP49418 695 aa12.63□□□□□ -0.39
SCN5A-210ENST00000455624 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
SCN5A-210ENST00000455624 FOXD1Q16676 465 aa12.63□□□□□ -0.39
SCN5A-210ENST00000455624 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
SCN5A-210ENST00000455624 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
SCN5A-210ENST00000455624 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
SCN5A-210ENST00000455624 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-210ENST00000455624 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
SCN5A-210ENST00000455624 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-210ENST00000455624 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
SCN5A-210ENST00000455624 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
SCN5A-210ENST00000455624 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
SCN5A-210ENST00000455624 ANKRD30AQ9BXX3 1397 aa12.61□□□□□ -0.39
SCN5A-210ENST00000455624 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
SCN5A-210ENST00000455624 MSH5O43196 834 aa12.6□□□□□ -0.39
SCN5A-210ENST00000455624 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
SCN5A-210ENST00000455624 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
SCN5A-210ENST00000455624 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
SCN5A-210ENST00000455624 ARID3AQ99856 593 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 CTDP1Q9Y5B0 961 aaPredicted RBP12.59□□□□□ -0.39
SCN5A-210ENST00000455624 NUP155O75694 1391 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 TPM3P06753 285 aa12.59□□□□□ -0.39
SCN5A-210ENST00000455624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms