RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 KDM5BQ9UGL1 1544 aa13.6□□□□□ -0.23
VSIG4-204ENST00000455586 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
VSIG4-204ENST00000455586 DAPK1P53355 1430 aa13.6□□□□□ -0.23
VSIG4-204ENST00000455586 AKNAQ7Z591 1439 aa13.6□□□□□ -0.23
VSIG4-204ENST00000455586 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.23
VSIG4-204ENST00000455586 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
VSIG4-204ENST00000455586 GCC2Q8IWJ2 1684 aa13.59□□□□□ -0.23
VSIG4-204ENST00000455586 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
VSIG4-204ENST00000455586 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.24
VSIG4-204ENST00000455586 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.58□□□□□ -0.24
VSIG4-204ENST00000455586 KDM6BO15054 1643 aa13.57□□□□□ -0.24
VSIG4-204ENST00000455586 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
VSIG4-204ENST00000455586 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
VSIG4-204ENST00000455586 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
VSIG4-204ENST00000455586 NEUROD1Q13562 356 aa13.54□□□□□ -0.24
VSIG4-204ENST00000455586 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
VSIG4-204ENST00000455586 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
VSIG4-204ENST00000455586 DIEXFQ68CQ4 756 aaKnown RBP13.53□□□□□ -0.24
VSIG4-204ENST00000455586 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.24
VSIG4-204ENST00000455586 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
VSIG4-204ENST00000455586 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
VSIG4-204ENST00000455586 SAMD9LQ8IVG5 1584 aa13.51□□□□□ -0.25
VSIG4-204ENST00000455586 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
VSIG4-204ENST00000455586 FOXD1Q16676 465 aa13.5□□□□□ -0.25
VSIG4-204ENST00000455586 PREX2Q70Z35 1606 aa13.5□□□□□ -0.25
VSIG4-204ENST00000455586 WDR7Q9Y4E6 1490 aa13.5□□□□□ -0.25
VSIG4-204ENST00000455586 MBD5Q9P267 1494 aa13.49□□□□□ -0.25
VSIG4-204ENST00000455586 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
VSIG4-204ENST00000455586 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
VSIG4-204ENST00000455586 TSPY10P0CW01 314 aa13.48□□□□□ -0.25
VSIG4-204ENST00000455586 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
VSIG4-204ENST00000455586 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
VSIG4-204ENST00000455586 SYCP2Q9BX26 1530 aa13.47□□□□□ -0.25
VSIG4-204ENST00000455586 ADGBQ8N7X0 1667 aa13.47□□□□□ -0.25
VSIG4-204ENST00000455586 PLCH2O75038 1416 aa13.47□□□□□ -0.25
VSIG4-204ENST00000455586 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
VSIG4-204ENST00000455586 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.25
VSIG4-204ENST00000455586 ARHGEF12Q9NZN5 1544 aa13.46□□□□□ -0.25
VSIG4-204ENST00000455586 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.26
VSIG4-204ENST00000455586 EFCAB2Q5VUJ9 269 aa13.45□□□□□ -0.26
VSIG4-204ENST00000455586 RIMBP3CA6NJZ7 1639 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 RIMBP3BA6NNM3 1639 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
VSIG4-204ENST00000455586 ANKRD30AQ9BXX3 1397 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
VSIG4-204ENST00000455586 ADGRL2O95490 1459 aa13.43□□□□□ -0.26
VSIG4-204ENST00000455586 CCDC141Q6ZP82 1450 aa13.42□□□□□ -0.26
VSIG4-204ENST00000455586 SHANK2Q9UPX8 1470 aa13.42□□□□□ -0.26
VSIG4-204ENST00000455586 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
VSIG4-204ENST00000455586 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
VSIG4-204ENST00000455586 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
VSIG4-204ENST00000455586 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
VSIG4-204ENST00000455586 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
VSIG4-204ENST00000455586 FANCAO15360 1455 aa13.38□□□□□ -0.27
VSIG4-204ENST00000455586 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
VSIG4-204ENST00000455586 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
VSIG4-204ENST00000455586 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
VSIG4-204ENST00000455586 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
VSIG4-204ENST00000455586 ABCC1P33527 1531 aa13.37□□□□□ -0.27
VSIG4-204ENST00000455586 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
VSIG4-204ENST00000455586 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
VSIG4-204ENST00000455586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
VSIG4-204ENST00000455586 NUP155O75694 1391 aa13.35□□□□□ -0.27
VSIG4-204ENST00000455586 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
VSIG4-204ENST00000455586 SCAPERQ9BY12 1400 aa13.34□□□□□ -0.27
VSIG4-204ENST00000455586 PZPP20742 1482 aa13.34□□□□□ -0.27
VSIG4-204ENST00000455586 PKD2Q13563 968 aa13.34□□□□□ -0.27
VSIG4-204ENST00000455586 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
VSIG4-204ENST00000455586 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
VSIG4-204ENST00000455586 PPP1R15AO75807 674 aaPredicted RBP13.33□□□□□ -0.28
VSIG4-204ENST00000455586 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
VSIG4-204ENST00000455586 ARAP3Q8WWN8 1544 aa13.3□□□□□ -0.28
VSIG4-204ENST00000455586 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
VSIG4-204ENST00000455586 MAST1Q9Y2H9 1570 aa13.29□□□□□ -0.28
VSIG4-204ENST00000455586 RAPGEF3O95398 923 aa13.29□□□□□ -0.28
VSIG4-204ENST00000455586 HIRIP3Q9BW71 556 aaPredicted RBP13.29□□□□□ -0.28
VSIG4-204ENST00000455586 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
VSIG4-204ENST00000455586 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.29
VSIG4-204ENST00000455586 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
VSIG4-204ENST00000455586 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
VSIG4-204ENST00000455586 MIER1Q8N108 512 aa13.25□□□□□ -0.29
VSIG4-204ENST00000455586 PLXNC1O60486 1568 aa13.25□□□□□ -0.29
VSIG4-204ENST00000455586 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
VSIG4-204ENST00000455586 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
VSIG4-204ENST00000455586 FAM135AQ9P2D6 1515 aa13.22□□□□□ -0.29
VSIG4-204ENST00000455586 KIF3BO15066 747 aa13.22□□□□□ -0.29
VSIG4-204ENST00000455586 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
VSIG4-204ENST00000455586 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
VSIG4-204ENST00000455586 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
VSIG4-204ENST00000455586 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
VSIG4-204ENST00000455586 ERBINQ96RT1 1412 aa13.2□□□□□ -0.3
VSIG4-204ENST00000455586 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
VSIG4-204ENST00000455586 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
VSIG4-204ENST00000455586 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
VSIG4-204ENST00000455586 UNC13BO14795 1591 aa13.19□□□□□ -0.3
VSIG4-204ENST00000455586 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
VSIG4-204ENST00000455586 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
VSIG4-204ENST00000455586 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms