RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 RICTORQ6R327 1708 aa16.78■□□□□ 0.28
NIPSNAP1-204ENST00000455496 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
NIPSNAP1-204ENST00000455496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
NIPSNAP1-204ENST00000455496 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
NIPSNAP1-204ENST00000455496 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
NIPSNAP1-204ENST00000455496 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
NIPSNAP1-204ENST00000455496 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
NIPSNAP1-204ENST00000455496 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
NIPSNAP1-204ENST00000455496 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
NIPSNAP1-204ENST00000455496 ATP10AO60312 1499 aa16.72■□□□□ 0.27
NIPSNAP1-204ENST00000455496 TOM1O60784 492 aa16.71■□□□□ 0.27
NIPSNAP1-204ENST00000455496 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
NIPSNAP1-204ENST00000455496 TRAPPC8Q9Y2L5 1435 aa16.68■□□□□ 0.26
NIPSNAP1-204ENST00000455496 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
NIPSNAP1-204ENST00000455496 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
NIPSNAP1-204ENST00000455496 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
NIPSNAP1-204ENST00000455496 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
NIPSNAP1-204ENST00000455496 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
NIPSNAP1-204ENST00000455496 P3H3Q8IVL6 736 aa16.63■□□□□ 0.25
NIPSNAP1-204ENST00000455496 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
NIPSNAP1-204ENST00000455496 PKD2Q13563 968 aa16.62■□□□□ 0.25
NIPSNAP1-204ENST00000455496 CAMSAP1Q5T5Y3 1602 aa16.6■□□□□ 0.25
NIPSNAP1-204ENST00000455496 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
NIPSNAP1-204ENST00000455496 RGS17Q9UGC6 210 aaPredicted RBP16.56■□□□□ 0.24
NIPSNAP1-204ENST00000455496 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
NIPSNAP1-204ENST00000455496 C3P01024 1663 aa16.55■□□□□ 0.24
NIPSNAP1-204ENST00000455496 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
NIPSNAP1-204ENST00000455496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.24
NIPSNAP1-204ENST00000455496 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.23
NIPSNAP1-204ENST00000455496 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
NIPSNAP1-204ENST00000455496 NPATQ14207 1427 aa16.5■□□□□ 0.23
NIPSNAP1-204ENST00000455496 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
NIPSNAP1-204ENST00000455496 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
NIPSNAP1-204ENST00000455496 EFCAB2Q5VUJ9 269 aa16.49■□□□□ 0.23
NIPSNAP1-204ENST00000455496 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
NIPSNAP1-204ENST00000455496 PLCH2O75038 1416 aa16.48■□□□□ 0.23
NIPSNAP1-204ENST00000455496 CPS1P31327 1500 aa16.47■□□□□ 0.23
NIPSNAP1-204ENST00000455496 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
NIPSNAP1-204ENST00000455496 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
NIPSNAP1-204ENST00000455496 AGLP35573 1532 aa16.45■□□□□ 0.22
NIPSNAP1-204ENST00000455496 AFAP1Q8N556 730 aa16.45■□□□□ 0.22
NIPSNAP1-204ENST00000455496 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
NIPSNAP1-204ENST00000455496 POTEAQ6S8J7 498 aa16.44■□□□□ 0.22
NIPSNAP1-204ENST00000455496 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
NIPSNAP1-204ENST00000455496 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
NIPSNAP1-204ENST00000455496 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
NIPSNAP1-204ENST00000455496 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
NIPSNAP1-204ENST00000455496 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
NIPSNAP1-204ENST00000455496 KDM5CP41229 1560 aa16.36■□□□□ 0.21
NIPSNAP1-204ENST00000455496 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
NIPSNAP1-204ENST00000455496 MLH3Q9UHC1 1453 aa16.34■□□□□ 0.21
NIPSNAP1-204ENST00000455496 SAMD9Q5K651 1589 aa16.33■□□□□ 0.2
NIPSNAP1-204ENST00000455496 CEP170BQ9Y4F5 1589 aaPredicted RBP16.33■□□□□ 0.2
NIPSNAP1-204ENST00000455496 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
NIPSNAP1-204ENST00000455496 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
NIPSNAP1-204ENST00000455496 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
NIPSNAP1-204ENST00000455496 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
NIPSNAP1-204ENST00000455496 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
NIPSNAP1-204ENST00000455496 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
NIPSNAP1-204ENST00000455496 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
NIPSNAP1-204ENST00000455496 ABCA6Q8N139 1617 aa16.29■□□□□ 0.2
NIPSNAP1-204ENST00000455496 MYO3AQ8NEV4 1616 aa16.29■□□□□ 0.2
NIPSNAP1-204ENST00000455496 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
NIPSNAP1-204ENST00000455496 A2ML1A8K2U0 1454 aa16.25■□□□□ 0.19
NIPSNAP1-204ENST00000455496 ARHGAP5Q13017 1502 aa16.24■□□□□ 0.19
NIPSNAP1-204ENST00000455496 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
NIPSNAP1-204ENST00000455496 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
NIPSNAP1-204ENST00000455496 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
NIPSNAP1-204ENST00000455496 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
NIPSNAP1-204ENST00000455496 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
NIPSNAP1-204ENST00000455496 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
NIPSNAP1-204ENST00000455496 NEURL4Q96JN8 1562 aa16.19■□□□□ 0.18
NIPSNAP1-204ENST00000455496 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
NIPSNAP1-204ENST00000455496 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
NIPSNAP1-204ENST00000455496 GGT6Q6P531 493 aa16.17■□□□□ 0.18
NIPSNAP1-204ENST00000455496 THEMISQ8N1K5 641 aaPredicted RBP16.17■□□□□ 0.18
NIPSNAP1-204ENST00000455496 POLR1AO95602 1720 aaPredicted RBP16.16■□□□□ 0.18
NIPSNAP1-204ENST00000455496 NPHP4O75161 1426 aaPredicted RBP16.16■□□□□ 0.18
NIPSNAP1-204ENST00000455496 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
NIPSNAP1-204ENST00000455496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■□□ 19.2
NIPSNAP1-204ENST00000455496 FAM135BQ49AJ0 1406 aa16.14■□□□□ 0.17
NIPSNAP1-204ENST00000455496 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
NIPSNAP1-204ENST00000455496 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
NIPSNAP1-204ENST00000455496 MED14O60244 1454 aa16.13■□□□□ 0.17
NIPSNAP1-204ENST00000455496 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
NIPSNAP1-204ENST00000455496 KIF14Q15058 1648 aa16.11■□□□□ 0.17
NIPSNAP1-204ENST00000455496 TNRQ92752 1358 aa16.11■□□□□ 0.17
NIPSNAP1-204ENST00000455496 CLIP1P30622 1438 aa16.1■□□□□ 0.17
NIPSNAP1-204ENST00000455496 SYNMO15061 1565 aa16.09■□□□□ 0.17
NIPSNAP1-204ENST00000455496 ZNF772Q68DY9 489 aaPredicted RBP16.09■□□□□ 0.17
NIPSNAP1-204ENST00000455496 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
NIPSNAP1-204ENST00000455496 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
NIPSNAP1-204ENST00000455496 ABCC1P33527 1531 aa16.09■□□□□ 0.17
NIPSNAP1-204ENST00000455496 FOXD1Q16676 465 aa16.06■□□□□ 0.16
NIPSNAP1-204ENST00000455496 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
NIPSNAP1-204ENST00000455496 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
NIPSNAP1-204ENST00000455496 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
NIPSNAP1-204ENST00000455496 RXRBP28702 533 aa16.04■□□□□ 0.16
NIPSNAP1-204ENST00000455496 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
NIPSNAP1-204ENST00000455496 ITSN2Q9NZM3 1697 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms