RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
RPE-216ENST00000454822 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
RPE-216ENST00000454822 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
RPE-216ENST00000454822 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
RPE-216ENST00000454822 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
RPE-216ENST00000454822 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
RPE-216ENST00000454822 CLASP1Q7Z460 1538 aa12.8□□□□□ -0.36
RPE-216ENST00000454822 KDM6BO15054 1643 aa12.8□□□□□ -0.36
RPE-216ENST00000454822 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
RPE-216ENST00000454822 CDC42BPAQ5VT25 1732 aa12.77□□□□□ -0.37
RPE-216ENST00000454822 ACIN1Q9UKV3 1341 aaKnown RBP12.76□□□□□ -0.37
RPE-216ENST00000454822 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
RPE-216ENST00000454822 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
RPE-216ENST00000454822 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
RPE-216ENST00000454822 NCOA1Q15788 1441 aa12.73□□□□□ -0.37
RPE-216ENST00000454822 MIER1Q8N108 512 aa12.73□□□□□ -0.37
RPE-216ENST00000454822 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
RPE-216ENST00000454822 ADGRL2O95490 1459 aa12.72□□□□□ -0.37
RPE-216ENST00000454822 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.38
RPE-216ENST00000454822 CROCC2H7BZ55 1655 aa12.7□□□□□ -0.38
RPE-216ENST00000454822 ADGBQ8N7X0 1667 aa12.7□□□□□ -0.38
RPE-216ENST00000454822 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
RPE-216ENST00000454822 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
RPE-216ENST00000454822 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
RPE-216ENST00000454822 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
RPE-216ENST00000454822 FOXD1Q16676 465 aa12.68□□□□□ -0.38
RPE-216ENST00000454822 CDC42BPBQ9Y5S2 1711 aa12.68□□□□□ -0.38
RPE-216ENST00000454822 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
RPE-216ENST00000454822 SHANK2Q9UPX8 1470 aa12.68□□□□□ -0.38
RPE-216ENST00000454822 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
RPE-216ENST00000454822 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
RPE-216ENST00000454822 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
RPE-216ENST00000454822 PREX2Q70Z35 1606 aa12.67□□□□□ -0.38
RPE-216ENST00000454822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPE-216ENST00000454822 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
RPE-216ENST00000454822 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
RPE-216ENST00000454822 ZCCHC11Q5TAX3 1644 aaKnown RBP12.65□□□□□ -0.38
RPE-216ENST00000454822 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
RPE-216ENST00000454822 TTC37Q6PGP7 1564 aa12.65□□□□□ -0.38
RPE-216ENST00000454822 SAMD9LQ8IVG5 1584 aa12.65□□□□□ -0.38
RPE-216ENST00000454822 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
RPE-216ENST00000454822 ANKRD50Q9ULJ7 1429 aa12.65□□□□□ -0.38
RPE-216ENST00000454822 PZPP20742 1482 aa12.64□□□□□ -0.39
RPE-216ENST00000454822 ARHGAP5Q13017 1502 aa12.63□□□□□ -0.39
RPE-216ENST00000454822 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
RPE-216ENST00000454822 CCDC141Q6ZP82 1450 aa12.62□□□□□ -0.39
RPE-216ENST00000454822 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
RPE-216ENST00000454822 KIF15Q9NS87 1388 aa12.61□□□□□ -0.39
RPE-216ENST00000454822 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
RPE-216ENST00000454822 HIRIP3Q9BW71 556 aaPredicted RBP12.6□□□□□ -0.39
RPE-216ENST00000454822 PLCH2O75038 1416 aa12.6□□□□□ -0.39
RPE-216ENST00000454822 KIAA1107Q9UPP5 1409 aa12.59□□□□□ -0.39
RPE-216ENST00000454822 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
RPE-216ENST00000454822 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
RPE-216ENST00000454822 PKD2Q13563 968 aa12.59□□□□□ -0.39
RPE-216ENST00000454822 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
RPE-216ENST00000454822 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
RPE-216ENST00000454822 NUP155O75694 1391 aa12.58□□□□□ -0.4
RPE-216ENST00000454822 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
RPE-216ENST00000454822 DDX10Q13206 875 aaKnown RBP12.56□□□□□ -0.4
RPE-216ENST00000454822 ARHGEF12Q9NZN5 1544 aa12.56□□□□□ -0.4
RPE-216ENST00000454822 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
RPE-216ENST00000454822 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
RPE-216ENST00000454822 KDM5DQ9BY66 1539 aa12.54□□□□□ -0.4
RPE-216ENST00000454822 WDR7Q9Y4E6 1490 aa12.54□□□□□ -0.4
RPE-216ENST00000454822 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
RPE-216ENST00000454822 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.4
RPE-216ENST00000454822 ABCC1P33527 1531 aa12.51□□□□□ -0.41
RPE-216ENST00000454822 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
RPE-216ENST00000454822 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
RPE-216ENST00000454822 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
RPE-216ENST00000454822 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
RPE-216ENST00000454822 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
RPE-216ENST00000454822 ASXL2Q76L83 1435 aa12.49□□□□□ -0.41
RPE-216ENST00000454822 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPE-216ENST00000454822 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPE-216ENST00000454822 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
RPE-216ENST00000454822 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
RPE-216ENST00000454822 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
RPE-216ENST00000454822 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
RPE-216ENST00000454822 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPE-216ENST00000454822 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
RPE-216ENST00000454822 UNC13BO14795 1591 aa12.45□□□□□ -0.42
RPE-216ENST00000454822 FANCAO15360 1455 aa12.45□□□□□ -0.42
RPE-216ENST00000454822 RTEL1-TNFRSF6BF6WH68 1400 aa12.45□□□□□ -0.42
RPE-216ENST00000454822 ERBINQ96RT1 1412 aa12.44□□□□□ -0.42
RPE-216ENST00000454822 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
RPE-216ENST00000454822 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
RPE-216ENST00000454822 ANP32CO43423 234 aa12.41□□□□□ -0.42
RPE-216ENST00000454822 SCAPERQ9BY12 1400 aa12.41□□□□□ -0.42
RPE-216ENST00000454822 ZNF326Q5BKZ1 582 aaKnown RBP12.41□□□□□ -0.42
RPE-216ENST00000454822 SPATA31E1Q6ZUB1 1445 aa12.41□□□□□ -0.42
RPE-216ENST00000454822 MAGI2Q86UL8 1455 aa12.41□□□□□ -0.42
RPE-216ENST00000454822 C11orf95C9JLR9 678 aaPredicted RBP12.4□□□□□ -0.42
RPE-216ENST00000454822 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
RPE-216ENST00000454822 ADGRL1O94910 1474 aa12.4□□□□□ -0.42
RPE-216ENST00000454822 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
RPE-216ENST00000454822 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
RPE-216ENST00000454822 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
RPE-216ENST00000454822 DCAF11Q8TEB1 546 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms