RNA–Protein interactions for RNA: ENST00000454749.1

LINC00652-202, long intergenic non-protein coding RNA 652, humanhuman

TSL 1 (best) BASIC

Gene LINC00652, Length 963 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00652-202ENST00000454749 RAPGEF2Q9Y4G8 1499 aa12.95□□□□□ -0.34
LINC00652-202ENST00000454749 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
LINC00652-202ENST00000454749 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
LINC00652-202ENST00000454749 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
LINC00652-202ENST00000454749 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
LINC00652-202ENST00000454749 UGGT2Q9NYU1 1516 aa12.9□□□□□ -0.34
LINC00652-202ENST00000454749 ABCA9Q8IUA7 1624 aa12.9□□□□□ -0.34
LINC00652-202ENST00000454749 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
LINC00652-202ENST00000454749 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
LINC00652-202ENST00000454749 TOM1O60784 492 aa12.88□□□□□ -0.35
LINC00652-202ENST00000454749 DENND4BO75064 1496 aaPredicted RBP12.88□□□□□ -0.35
LINC00652-202ENST00000454749 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
LINC00652-202ENST00000454749 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
LINC00652-202ENST00000454749 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
LINC00652-202ENST00000454749 ABCA8O94911 1581 aa12.86□□□□□ -0.35
LINC00652-202ENST00000454749 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
LINC00652-202ENST00000454749 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
LINC00652-202ENST00000454749 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
LINC00652-202ENST00000454749 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.36
LINC00652-202ENST00000454749 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
LINC00652-202ENST00000454749 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
LINC00652-202ENST00000454749 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
LINC00652-202ENST00000454749 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
LINC00652-202ENST00000454749 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
LINC00652-202ENST00000454749 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
LINC00652-202ENST00000454749 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00652-202ENST00000454749 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
LINC00652-202ENST00000454749 ATP10BO94823 1461 aa12.77□□□□□ -0.37
LINC00652-202ENST00000454749 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
LINC00652-202ENST00000454749 C3P01024 1663 aa12.75□□□□□ -0.37
LINC00652-202ENST00000454749 EEA1Q15075 1411 aa12.75□□□□□ -0.37
LINC00652-202ENST00000454749 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
LINC00652-202ENST00000454749 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
LINC00652-202ENST00000454749 ATP10AO60312 1499 aa12.74□□□□□ -0.37
LINC00652-202ENST00000454749 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
LINC00652-202ENST00000454749 PKD2Q13563 968 aa12.73□□□□□ -0.37
LINC00652-202ENST00000454749 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
LINC00652-202ENST00000454749 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
LINC00652-202ENST00000454749 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
LINC00652-202ENST00000454749 CPS1P31327 1500 aa12.69□□□□□ -0.38
LINC00652-202ENST00000454749 TCOF1Q13428 1488 aaKnown RBP12.69□□□□□ -0.38
LINC00652-202ENST00000454749 RAPGEF6Q8TEU7 1601 aa12.69□□□□□ -0.38
LINC00652-202ENST00000454749 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
LINC00652-202ENST00000454749 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
LINC00652-202ENST00000454749 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
LINC00652-202ENST00000454749 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
LINC00652-202ENST00000454749 ESF1Q9H501 851 aaKnown RBP12.62□□□□□ -0.39
LINC00652-202ENST00000454749 NPATQ14207 1427 aa12.62□□□□□ -0.39
LINC00652-202ENST00000454749 SCAPERQ9BY12 1400 aa12.62□□□□□ -0.39
LINC00652-202ENST00000454749 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
LINC00652-202ENST00000454749 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
LINC00652-202ENST00000454749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
LINC00652-202ENST00000454749 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
LINC00652-202ENST00000454749 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
LINC00652-202ENST00000454749 NCBP3Q53F19 620 aaKnown RBP12.58□□□□□ -0.4
LINC00652-202ENST00000454749 IFFO2Q5TF58 517 aa12.56□□□□□ -0.4
LINC00652-202ENST00000454749 ZNF142P52746 1687 aaPredicted RBP12.56□□□□□ -0.4
LINC00652-202ENST00000454749 AGLP35573 1532 aa12.56□□□□□ -0.4
LINC00652-202ENST00000454749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00652-202ENST00000454749 CNTLNQ9NXG0 1405 aa12.55□□□□□ -0.4
LINC00652-202ENST00000454749 NUP153P49790 1475 aaKnown RBP12.55□□□□□ -0.4
LINC00652-202ENST00000454749 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
LINC00652-202ENST00000454749 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
LINC00652-202ENST00000454749 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
LINC00652-202ENST00000454749 LRRIQ1Q96JM4 1722 aa12.54□□□□□ -0.4
LINC00652-202ENST00000454749 VWDEQ8N2E2 1590 aa12.53□□□□□ -0.4
LINC00652-202ENST00000454749 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
LINC00652-202ENST00000454749 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
LINC00652-202ENST00000454749 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.4
LINC00652-202ENST00000454749 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
LINC00652-202ENST00000454749 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
LINC00652-202ENST00000454749 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.41
LINC00652-202ENST00000454749 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
LINC00652-202ENST00000454749 NEURL4Q96JN8 1562 aa12.5□□□□□ -0.41
LINC00652-202ENST00000454749 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
LINC00652-202ENST00000454749 RNF17Q9BXT8 1623 aaKnown RBP12.49□□□□□ -0.41
LINC00652-202ENST00000454749 LRRC7Q96NW7 1537 aa12.49□□□□□ -0.41
LINC00652-202ENST00000454749 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
LINC00652-202ENST00000454749 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
LINC00652-202ENST00000454749 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
LINC00652-202ENST00000454749 PLCH2O75038 1416 aa12.47□□□□□ -0.41
LINC00652-202ENST00000454749 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
LINC00652-202ENST00000454749 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
LINC00652-202ENST00000454749 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
LINC00652-202ENST00000454749 MROH2AA6NES4 1674 aa12.47□□□□□ -0.41
LINC00652-202ENST00000454749 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.41
LINC00652-202ENST00000454749 KCNA4P22459 653 aa12.46□□□□□ -0.41
LINC00652-202ENST00000454749 KDM5CP41229 1560 aa12.46□□□□□ -0.42
LINC00652-202ENST00000454749 SETBP1Q9Y6X0 1596 aa12.46□□□□□ -0.42
LINC00652-202ENST00000454749 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
LINC00652-202ENST00000454749 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
LINC00652-202ENST00000454749 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
LINC00652-202ENST00000454749 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
LINC00652-202ENST00000454749 POLR1AO95602 1720 aaPredicted RBP12.44□□□□□ -0.42
LINC00652-202ENST00000454749 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
LINC00652-202ENST00000454749 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
LINC00652-202ENST00000454749 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
LINC00652-202ENST00000454749 KIF14Q15058 1648 aa12.41□□□□□ -0.42
LINC00652-202ENST00000454749 STRCP1A6NGW2 1772 aa12.41□□□□□ -0.42
LINC00652-202ENST00000454749 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms