RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
HCG18-240ENST00000454269 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.86□□□□□ -0.51
HCG18-240ENST00000454269 RGS3P49796 1198 aa11.86□□□□□ -0.51
HCG18-240ENST00000454269 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
HCG18-240ENST00000454269 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
HCG18-240ENST00000454269 KCNG1Q9UIX4 513 aa11.82□□□□□ -0.52
HCG18-240ENST00000454269 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
HCG18-240ENST00000454269 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
HCG18-240ENST00000454269 ARID3AQ99856 593 aa11.81□□□□□ -0.52
HCG18-240ENST00000454269 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
HCG18-240ENST00000454269 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
HCG18-240ENST00000454269 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
HCG18-240ENST00000454269 PRDM10Q9NQV6 1147 aa11.79□□□□□ -0.52
HCG18-240ENST00000454269 CLSTN1O94985 981 aa11.78□□□□□ -0.52
HCG18-240ENST00000454269 PAK3O75914 559 aaPredicted RBP11.77□□□□□ -0.53
HCG18-240ENST00000454269 NEFMP07197 916 aa11.77□□□□□ -0.53
HCG18-240ENST00000454269 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
HCG18-240ENST00000454269 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
HCG18-240ENST00000454269 EIF4G3O43432 1585 aaKnown RBP11.76□□□□□ -0.53
HCG18-240ENST00000454269 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
HCG18-240ENST00000454269 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
HCG18-240ENST00000454269 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
HCG18-240ENST00000454269 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
HCG18-240ENST00000454269 TMEM51Q9NW97 253 aa11.73□□□□□ -0.53
HCG18-240ENST00000454269 PTMAP06454 111 aaKnown RBP11.72□□□□□ -0.53
HCG18-240ENST00000454269 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
HCG18-240ENST00000454269 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
HCG18-240ENST00000454269 MMP14P50281 582 aa11.72□□□□□ -0.53
HCG18-240ENST00000454269 CLGNO14967 610 aa11.71□□□□□ -0.53
HCG18-240ENST00000454269 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.53
HCG18-240ENST00000454269 CHD1O14646 1710 aa11.71□□□□□ -0.54
HCG18-240ENST00000454269 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.54
HCG18-240ENST00000454269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
HCG18-240ENST00000454269 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
HCG18-240ENST00000454269 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
HCG18-240ENST00000454269 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
HCG18-240ENST00000454269 MCCP23508 829 aa11.69□□□□□ -0.54
HCG18-240ENST00000454269 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
HCG18-240ENST00000454269 CUX1P39880 1505 aa11.69□□□□□ -0.54
HCG18-240ENST00000454269 FAM193AP78312 1265 aa11.69□□□□□ -0.54
HCG18-240ENST00000454269 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
HCG18-240ENST00000454269 IFT140Q96RY7 1462 aa11.68□□□□□ -0.54
HCG18-240ENST00000454269 ITGAEP38570 1179 aa11.67□□□□□ -0.54
HCG18-240ENST00000454269 GSE1Q14687 1217 aa11.67□□□□□ -0.54
HCG18-240ENST00000454269 TMED8Q6PL24 325 aaPredicted RBP11.67□□□□□ -0.54
HCG18-240ENST00000454269 SMAP1Q8IYB5 467 aaPredicted RBP11.66□□□□□ -0.54
HCG18-240ENST00000454269 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
HCG18-240ENST00000454269 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
HCG18-240ENST00000454269 ANP32BQ92688 251 aaKnown RBP11.65□□□□□ -0.55
HCG18-240ENST00000454269 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.55
HCG18-240ENST00000454269 RIMBP3CA6NJZ7 1639 aa11.65□□□□□ -0.55
HCG18-240ENST00000454269 RIMBP3BA6NNM3 1639 aa11.65□□□□□ -0.55
HCG18-240ENST00000454269 RIMBP3Q9UFD9 1639 aa11.65□□□□□ -0.55
HCG18-240ENST00000454269 TDRD9Q8NDG6 1382 aaKnown RBP11.64□□□□□ -0.55
HCG18-240ENST00000454269 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
HCG18-240ENST00000454269 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
HCG18-240ENST00000454269 FAM43BQ6ZT52 329 aaPredicted RBP11.63□□□□□ -0.55
HCG18-240ENST00000454269 UTP14CQ5TAP6 766 aaKnown RBP11.62□□□□□ -0.55
HCG18-240ENST00000454269 PTMSP20962 102 aa11.61□□□□□ -0.55
HCG18-240ENST00000454269 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
HCG18-240ENST00000454269 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
HCG18-240ENST00000454269 ZBTB47Q9UFB7 747 aaPredicted RBP11.61□□□□□ -0.55
HCG18-240ENST00000454269 PSMD1Q99460 953 aa11.6□□□□□ -0.55
HCG18-240ENST00000454269 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
HCG18-240ENST00000454269 PHF14O94880 888 aa11.59□□□□□ -0.55
HCG18-240ENST00000454269 HDAC5Q9UQL6 1122 aa11.59□□□□□ -0.55
HCG18-240ENST00000454269 SOGA1O94964 1423 aa11.59□□□□□ -0.55
HCG18-240ENST00000454269 FBLN2P98095 1184 aa11.59□□□□□ -0.55
HCG18-240ENST00000454269 PATL2C9JE40 543 aaKnown RBP11.58□□□□□ -0.56
HCG18-240ENST00000454269 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
HCG18-240ENST00000454269 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
HCG18-240ENST00000454269 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
HCG18-240ENST00000454269 PNNQ9H307 717 aaKnown RBP11.57□□□□□ -0.56
HCG18-240ENST00000454269 SETQ01105 290 aaPredicted RBP11.57□□□□□ -0.56
HCG18-240ENST00000454269 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
HCG18-240ENST00000454269 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
HCG18-240ENST00000454269 PBRM1Q86U86 1689 aa11.57□□□□□ -0.56
HCG18-240ENST00000454269 PSEN1P49768 467 aa11.56□□□□□ -0.56
HCG18-240ENST00000454269 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
HCG18-240ENST00000454269 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
HCG18-240ENST00000454269 TPM2P07951 284 aa11.55□□□□□ -0.56
HCG18-240ENST00000454269 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
HCG18-240ENST00000454269 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
HCG18-240ENST00000454269 CLCN1P35523 988 aa11.54□□□□□ -0.56
HCG18-240ENST00000454269 PPP4R3BQ5MIZ7 849 aa11.54□□□□□ -0.56
HCG18-240ENST00000454269 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
HCG18-240ENST00000454269 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
HCG18-240ENST00000454269 PRDM16Q9HAZ2 1276 aa11.5□□□□□ -0.57
HCG18-240ENST00000454269 DMTNQ08495 405 aa11.49□□□□□ -0.57
HCG18-240ENST00000454269 TAF3Q5VWG9 929 aa11.49□□□□□ -0.57
HCG18-240ENST00000454269 ARAP1Q96P48 1450 aa11.49□□□□□ -0.57
HCG18-240ENST00000454269 APPP05067 770 aa11.49□□□□□ -0.57
HCG18-240ENST00000454269 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
HCG18-240ENST00000454269 ZHX1Q9UKY1 873 aaPredicted RBP11.49□□□□□ -0.57
HCG18-240ENST00000454269 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
HCG18-240ENST00000454269 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
HCG18-240ENST00000454269 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
HCG18-240ENST00000454269 KIF20AO95235 890 aa11.48□□□□□ -0.57
HCG18-240ENST00000454269 FRAT1Q92837 279 aaPredicted RBP11.47□□□□□ -0.57
HCG18-240ENST00000454269 DNAJC2Q99543 621 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms