RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 RCAN3Q9UKA8 241 aa24.53■■□□□ 1.52
PTPA-223ENST00000452489 PTPN23Q9H3S7 1636 aa24.52■■□□□ 1.52
PTPA-223ENST00000452489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.51
PTPA-223ENST00000452489 PNISRQ8TF01 805 aaKnown RBP24.5■■□□□ 1.51
PTPA-223ENST00000452489 CFAP43Q8NDM7 1665 aa24.49■■□□□ 1.51
PTPA-223ENST00000452489 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
PTPA-223ENST00000452489 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
PTPA-223ENST00000452489 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
PTPA-223ENST00000452489 ARXQ96QS3 562 aa24.46■■□□□ 1.51
PTPA-223ENST00000452489 NAIPQ13075 1403 aa24.46■■□□□ 1.51
PTPA-223ENST00000452489 ABCA5Q8WWZ7 1642 aa24.44■■□□□ 1.5
PTPA-223ENST00000452489 PLIN1O60240 522 aa24.44■■□□□ 1.5
PTPA-223ENST00000452489 PCF11O94913 1555 aaKnown RBP24.43■■□□□ 1.5
PTPA-223ENST00000452489 FGD6Q6ZV73 1430 aa24.42■■□□□ 1.5
PTPA-223ENST00000452489 CLCN1P35523 988 aa24.42■■□□□ 1.5
PTPA-223ENST00000452489 P3H3Q8IVL6 736 aa24.42■■□□□ 1.5
PTPA-223ENST00000452489 L1TD1Q5T7N2 865 aaKnown RBP24.41■■□□□ 1.5
PTPA-223ENST00000452489 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
PTPA-223ENST00000452489 TMC1Q8TDI8 760 aa24.41■■□□□ 1.5
PTPA-223ENST00000452489 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
PTPA-223ENST00000452489 A0A0U1RQG5 324 aaPredicted RBP24.39■■□□□ 1.5
PTPA-223ENST00000452489 C8orf34Q49A92 452 aa24.39■■□□□ 1.5
PTPA-223ENST00000452489 DENND4BO75064 1496 aaPredicted RBP24.39■■□□□ 1.5
PTPA-223ENST00000452489 FMN1Q68DA7 1419 aa24.39■■□□□ 1.49
PTPA-223ENST00000452489 CRBNQ96SW2 442 aa24.38■■□□□ 1.49
PTPA-223ENST00000452489 SPATA31E1Q6ZUB1 1445 aa24.37■■□□□ 1.49
PTPA-223ENST00000452489 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
PTPA-223ENST00000452489 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
PTPA-223ENST00000452489 XRCC6P12956 609 aaKnown RBP eCLIP24.34■■□□□ 1.49
PTPA-223ENST00000452489 RBM10P98175 930 aaKnown RBP24.33■■□□□ 1.49
PTPA-223ENST00000452489 PANK2Q9BZ23 570 aa24.33■■□□□ 1.49
PTPA-223ENST00000452489 POLR1AO95602 1720 aaPredicted RBP24.32■■□□□ 1.48
PTPA-223ENST00000452489 FOXD1Q16676 465 aa24.32■■□□□ 1.48
PTPA-223ENST00000452489 LRPPRCP42704 1394 aaKnown RBP24.31■■□□□ 1.48
PTPA-223ENST00000452489 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
PTPA-223ENST00000452489 CDCA7LQ96GN5 454 aa24.29■■□□□ 1.48
PTPA-223ENST00000452489 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
PTPA-223ENST00000452489 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
PTPA-223ENST00000452489 CUX1P39880 1505 aa24.27■■□□□ 1.48
PTPA-223ENST00000452489 KTN1Q86UP2 1357 aaKnown RBP24.27■■□□□ 1.48
PTPA-223ENST00000452489 SLKQ9H2G2 1235 aaPredicted RBP24.25■■□□□ 1.47
PTPA-223ENST00000452489 C20orf194Q5TEA3 1177 aa24.24■■□□□ 1.47
PTPA-223ENST00000452489 GOLGA6L3A6NEY3 463 aa24.23■■□□□ 1.47
PTPA-223ENST00000452489 AAMPQ13685 434 aa24.22■■□□□ 1.47
PTPA-223ENST00000452489 PRDM4Q9UKN5 801 aa24.22■■□□□ 1.47
PTPA-223ENST00000452489 RGS3P49796 1198 aa24.21■■□□□ 1.47
PTPA-223ENST00000452489 CHIC2Q9UKJ5 165 aa24.21■■□□□ 1.47
PTPA-223ENST00000452489 FHOD3Q2V2M9 1422 aa24.2■■□□□ 1.47
PTPA-223ENST00000452489 HECW1Q76N89 1606 aa24.2■■□□□ 1.46
PTPA-223ENST00000452489 MPHOSPH9Q99550 1183 aa24.2■■□□□ 1.46
PTPA-223ENST00000452489 FSD2A1L4K1 749 aa24.19■■□□□ 1.46
PTPA-223ENST00000452489 CENPQQ7L2Z9 268 aaPredicted RBP24.18■■□□□ 1.46
PTPA-223ENST00000452489 GZF1Q9H116 711 aaPredicted RBP24.18■■□□□ 1.46
PTPA-223ENST00000452489 MYOM3Q5VTT5 1437 aa24.18■■□□□ 1.46
PTPA-223ENST00000452489 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
PTPA-223ENST00000452489 ERBB4Q15303 1308 aa24.17■■□□□ 1.46
PTPA-223ENST00000452489 PDCL3Q9H2J4 239 aa24.17■■□□□ 1.46
PTPA-223ENST00000452489 IGF1RP08069 1367 aa24.17■■□□□ 1.46
PTPA-223ENST00000452489 FYCO1Q9BQS8 1478 aa24.16■■□□□ 1.46
PTPA-223ENST00000452489 BCORL1Q5H9F3 1711 aa24.16■■□□□ 1.46
PTPA-223ENST00000452489 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
PTPA-223ENST00000452489 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
PTPA-223ENST00000452489 TEX14Q8IWB6 1497 aa24.15■■□□□ 1.46
PTPA-223ENST00000452489 ATAD2BQ9ULI0 1458 aa24.14■■□□□ 1.46
PTPA-223ENST00000452489 KDM6BO15054 1643 aa24.14■■□□□ 1.45
PTPA-223ENST00000452489 USP19O94966 1318 aa24.13■■□□□ 1.45
PTPA-223ENST00000452489 CENPJQ9HC77 1338 aaPredicted RBP24.13■■□□□ 1.45
PTPA-223ENST00000452489 BRD4O60885 1362 aaPredicted RBP24.13■■□□□ 1.45
PTPA-223ENST00000452489 ESPNB1AK53 854 aa24.13■■□□□ 1.45
PTPA-223ENST00000452489 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
PTPA-223ENST00000452489 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
PTPA-223ENST00000452489 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
PTPA-223ENST00000452489 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
PTPA-223ENST00000452489 FGD1P98174 961 aa24.1■■□□□ 1.45
PTPA-223ENST00000452489 ANTXR1Q9H6X2 564 aa24.09■■□□□ 1.45
PTPA-223ENST00000452489 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
PTPA-223ENST00000452489 RPRD2Q5VT52 1461 aaKnown RBP24.09■■□□□ 1.45
PTPA-223ENST00000452489 TPM2P07951 284 aa24.08■■□□□ 1.45
PTPA-223ENST00000452489 PABPN1Q86U42 306 aaKnown RBP eCLIP24.08■■□□□ 1.45
PTPA-223ENST00000452489 USP47Q96K76 1375 aa24.08■■□□□ 1.44
PTPA-223ENST00000452489 KIF15Q9NS87 1388 aa24.06■■□□□ 1.44
PTPA-223ENST00000452489 SEC24BO95487 1268 aa24.06■■□□□ 1.44
PTPA-223ENST00000452489 BECN1Q14457 450 aa24.05■■□□□ 1.44
PTPA-223ENST00000452489 ANKRD30BQ9BXX2 1392 aa24.04■■□□□ 1.44
PTPA-223ENST00000452489 ZNF326Q5BKZ1 582 aaKnown RBP24.02■■□□□ 1.44
PTPA-223ENST00000452489 MYH16Q9H6N6 1097 aa24.02■■□□□ 1.44
PTPA-223ENST00000452489 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
PTPA-223ENST00000452489 GCC2Q8IWJ2 1684 aa24.01■■□□□ 1.43
PTPA-223ENST00000452489 MRE11P49959 708 aa24.01■■□□□ 1.43
PTPA-223ENST00000452489 RALBP1Q15311 655 aa23.99■■□□□ 1.43
PTPA-223ENST00000452489 KIAA1211Q6ZU35 1233 aa23.99■■□□□ 1.43
PTPA-223ENST00000452489 MCM4P33991 863 aa23.98■■□□□ 1.43
PTPA-223ENST00000452489 GRPEL1Q9HAV7 217 aa23.98■■□□□ 1.43
PTPA-223ENST00000452489 SPRYD3Q8NCJ5 442 aa23.95■■□□□ 1.43
PTPA-223ENST00000452489 ROCK2O75116 1388 aaKnown RBP23.95■■□□□ 1.42
PTPA-223ENST00000452489 CFTRP13569 1480 aa23.94■■□□□ 1.42
PTPA-223ENST00000452489 TRAK2O60296 914 aa23.93■■□□□ 1.42
PTPA-223ENST00000452489 TRIM44Q96DX7 344 aaPredicted RBP23.93■■□□□ 1.42
PTPA-223ENST00000452489 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
PTPA-223ENST00000452489 TBC1D2Q9BYX2 928 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms