RNA–Protein interactions for RNA: ENST00000451689.1

FAM49A-204, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-204ENST00000451689 SOX12O15370 315 aa9.37□□□□□ -0.91
FAM49A-204ENST00000451689 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
FAM49A-204ENST00000451689 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
FAM49A-204ENST00000451689 MFRPQ9BY79 579 aa9.36□□□□□ -0.91
FAM49A-204ENST00000451689 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
FAM49A-204ENST00000451689 NKX1-1Q15270 411 aaPredicted RBP9.34□□□□□ -0.91
FAM49A-204ENST00000451689 HMGXB3Q12766 1538 aa9.34□□□□□ -0.91
FAM49A-204ENST00000451689 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
FAM49A-204ENST00000451689 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
FAM49A-204ENST00000451689 NLRP6P59044 892 aa9.32□□□□□ -0.92
FAM49A-204ENST00000451689 CC2D2AQ9P2K1 1620 aa9.31□□□□□ -0.92
FAM49A-204ENST00000451689 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
FAM49A-204ENST00000451689 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
FAM49A-204ENST00000451689 NCAPD3P42695 1498 aa9.29□□□□□ -0.92
FAM49A-204ENST00000451689 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
FAM49A-204ENST00000451689 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
FAM49A-204ENST00000451689 PPP1R37O75864 691 aa9.27□□□□□ -0.93
FAM49A-204ENST00000451689 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
FAM49A-204ENST00000451689 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
FAM49A-204ENST00000451689 G3V3G9 751 aa9.24□□□□□ -0.93
FAM49A-204ENST00000451689 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
FAM49A-204ENST00000451689 BBXQ8WY36 941 aaPredicted RBP9.22□□□□□ -0.93
FAM49A-204ENST00000451689 C3orf67Q6ZVT6 689 aa9.21□□□□□ -0.94
FAM49A-204ENST00000451689 MICALL2Q8IY33 904 aa9.21□□□□□ -0.94
FAM49A-204ENST00000451689 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
FAM49A-204ENST00000451689 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
FAM49A-204ENST00000451689 PRDM2Q13029 1718 aa9.21□□□□□ -0.94
FAM49A-204ENST00000451689 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
FAM49A-204ENST00000451689 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
FAM49A-204ENST00000451689 TMEM92Q6UXU6 159 aa9.15□□□□□ -0.94
FAM49A-204ENST00000451689 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
FAM49A-204ENST00000451689 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
FAM49A-204ENST00000451689 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
FAM49A-204ENST00000451689 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
FAM49A-204ENST00000451689 ABCC8Q09428 1581 aa9.14□□□□□ -0.95
FAM49A-204ENST00000451689 SPRYD3Q8NCJ5 442 aa9.13□□□□□ -0.95
FAM49A-204ENST00000451689 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
FAM49A-204ENST00000451689 CFTRP13569 1480 aa9.09□□□□□ -0.95
FAM49A-204ENST00000451689 CDAN1Q8IWY9 1227 aa9.08□□□□□ -0.96
FAM49A-204ENST00000451689 BIVM-ERCC5R4GMW8 1640 aa9.07□□□□□ -0.96
FAM49A-204ENST00000451689 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
FAM49A-204ENST00000451689 CADPS2Q86UW7 1296 aa9.05□□□□□ -0.96
FAM49A-204ENST00000451689 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
FAM49A-204ENST00000451689 TOP2BQ02880 1626 aa9.02□□□□□ -0.96
FAM49A-204ENST00000451689 KIF3CO14782 793 aa9.02□□□□□ -0.97
FAM49A-204ENST00000451689 NESP48681 1621 aa9.02□□□□□ -0.97
FAM49A-204ENST00000451689 CUX1P39880 1505 aa9.01□□□□□ -0.97
FAM49A-204ENST00000451689 GPHNQ9NQX3 736 aaPredicted RBP9□□□□□ -0.97
FAM49A-204ENST00000451689 NCKAP5LQ9HCH0 1330 aa9□□□□□ -0.97
FAM49A-204ENST00000451689 LAMC3Q9Y6N6 1575 aa8.99□□□□□ -0.97
FAM49A-204ENST00000451689 SNPHO15079 494 aa8.99□□□□□ -0.97
FAM49A-204ENST00000451689 ST18O60284 1047 aa8.99□□□□□ -0.97
FAM49A-204ENST00000451689 HOXB3P14651 431 aaPredicted RBP8.99□□□□□ -0.97
FAM49A-204ENST00000451689 KIF21AQ7Z4S6 1674 aa8.99□□□□□ -0.97
FAM49A-204ENST00000451689 CADPSQ9ULU8 1353 aa8.99□□□□□ -0.97
FAM49A-204ENST00000451689 WRNQ14191 1432 aaPredicted RBP eCLIP8.98□□□□□ -0.97
FAM49A-204ENST00000451689 DSG2Q14126 1118 aa8.98□□□□□ -0.97
FAM49A-204ENST00000451689 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
FAM49A-204ENST00000451689 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
FAM49A-204ENST00000451689 CRISPLD2Q9H0B8 497 aa8.97□□□□□ -0.97
FAM49A-204ENST00000451689 PDE4AP27815 886 aa8.96□□□□□ -0.98
FAM49A-204ENST00000451689 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
FAM49A-204ENST00000451689 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
FAM49A-204ENST00000451689 ZNF710Q8N1W2 664 aa8.94□□□□□ -0.98
FAM49A-204ENST00000451689 FOXK1P85037 733 aa8.93□□□□□ -0.98
FAM49A-204ENST00000451689 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
FAM49A-204ENST00000451689 MARVELD3Q96A59 401 aa8.93□□□□□ -0.98
FAM49A-204ENST00000451689 RUSC2Q8N2Y8 1516 aa8.93□□□□□ -0.98
FAM49A-204ENST00000451689 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
FAM49A-204ENST00000451689 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
FAM49A-204ENST00000451689 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
FAM49A-204ENST00000451689 PPP1R15BQ5SWA1 713 aa8.91□□□□□ -0.98
FAM49A-204ENST00000451689 KHSRPQ92945 711 aaKnown RBP eCLIP8.91□□□□□ -0.98
FAM49A-204ENST00000451689 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.98
FAM49A-204ENST00000451689 SOGA1O94964 1423 aa8.9□□□□□ -0.98
FAM49A-204ENST00000451689 DDX27Q96GQ7 796 aaKnown RBP8.9□□□□□ -0.98
FAM49A-204ENST00000451689 URB2Q14146 1524 aaKnown RBP8.9□□□□□ -0.99
FAM49A-204ENST00000451689 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
FAM49A-204ENST00000451689 TOPBP1Q92547 1522 aa8.87□□□□□ -0.99
FAM49A-204ENST00000451689 MFSD10Q14728 455 aa8.87□□□□□ -0.99
FAM49A-204ENST00000451689 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
FAM49A-204ENST00000451689 THOC2Q8NI27 1593 aaKnown RBP8.86□□□□□ -0.99
FAM49A-204ENST00000451689 HAP1P54257 671 aaPredicted RBP8.86□□□□□ -0.99
FAM49A-204ENST00000451689 MMRN1Q13201 1228 aa8.86□□□□□ -0.99
FAM49A-204ENST00000451689 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
FAM49A-204ENST00000451689 FGD5Q6ZNL6 1462 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 CEP164Q9UPV0 1460 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 KIF21BO75037 1637 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 SLC34A2O95436 690 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
FAM49A-204ENST00000451689 SPNS2Q8IVW8 549 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
FAM49A-204ENST00000451689 EMP3P54852 163 aa8.84□□□□□ -0.99
FAM49A-204ENST00000451689 NUDT7P0C024 238 aa8.83□□□□□ -1
FAM49A-204ENST00000451689 ZSWIM6Q9HCJ5 1215 aa8.83□□□□□ -1
FAM49A-204ENST00000451689 TARBP1Q13395 1621 aaKnown RBP8.83□□□□□ -1
FAM49A-204ENST00000451689 POLA1P09884 1462 aaPredicted RBP8.83□□□□□ -1
FAM49A-204ENST00000451689 WDR62O43379 1518 aa8.82□□□□□ -1
FAM49A-204ENST00000451689 FAM205CA6NFA0 338 aa8.82□□□□□ -1
FAM49A-204ENST00000451689 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms