RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 PLCH2O75038 1416 aa26.81■■□□□ 1.88
RPUSD3-209ENST00000451405 RICTORQ6R327 1708 aa26.79■■□□□ 1.88
RPUSD3-209ENST00000451405 CFAP74Q9C0B2 1584 aa26.78■■□□□ 1.88
RPUSD3-209ENST00000451405 ARHGEF40Q8TER5 1519 aa26.77■■□□□ 1.88
RPUSD3-209ENST00000451405 KIF14Q15058 1648 aa26.76■■□□□ 1.87
RPUSD3-209ENST00000451405 TROQ12816 1431 aaPredicted RBP26.75■■□□□ 1.87
RPUSD3-209ENST00000451405 CASKIN1Q8WXD9 1431 aa26.73■■□□□ 1.87
RPUSD3-209ENST00000451405 SCAPERQ9BY12 1400 aa26.72■■□□□ 1.87
RPUSD3-209ENST00000451405 EFCAB2Q5VUJ9 269 aa26.71■■□□□ 1.87
RPUSD3-209ENST00000451405 CLIP1P30622 1438 aa26.69■■□□□ 1.86
RPUSD3-209ENST00000451405 MYO5CQ9NQX4 1742 aa26.69■■□□□ 1.86
RPUSD3-209ENST00000451405 YEATS2Q9ULM3 1422 aa26.68■■□□□ 1.86
RPUSD3-209ENST00000451405 ZFYVE16Q7Z3T8 1539 aa26.67■■□□□ 1.86
RPUSD3-209ENST00000451405 ZMYM4Q5VZL5 1548 aa26.66■■□□□ 1.86
RPUSD3-209ENST00000451405 MAGI2Q86UL8 1455 aa26.65■■□□□ 1.86
RPUSD3-209ENST00000451405 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
RPUSD3-209ENST00000451405 CCDC18Q5T9S5 1454 aa26.63■■□□□ 1.85
RPUSD3-209ENST00000451405 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
RPUSD3-209ENST00000451405 ARHGAP5Q13017 1502 aa26.6■■□□□ 1.85
RPUSD3-209ENST00000451405 SIGLEC1Q9BZZ2 1709 aa26.6■■□□□ 1.85
RPUSD3-209ENST00000451405 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
RPUSD3-209ENST00000451405 CEBPAP49715 358 aaPredicted RBP26.59■■□□□ 1.85
RPUSD3-209ENST00000451405 CDC42BPBQ9Y5S2 1711 aa26.59■■□□□ 1.85
RPUSD3-209ENST00000451405 AFAP1Q8N556 730 aa26.58■■□□□ 1.85
RPUSD3-209ENST00000451405 ILDR2Q71H61 639 aa26.55■■□□□ 1.84
RPUSD3-209ENST00000451405 MYT1LQ9UL68 1186 aa26.55■■□□□ 1.84
RPUSD3-209ENST00000451405 SOCS7O14512 581 aa26.54■■□□□ 1.84
RPUSD3-209ENST00000451405 ATP10AO60312 1499 aa26.54■■□□□ 1.84
RPUSD3-209ENST00000451405 FER1L4A9Z1Z3 1794 aa26.52■■□□□ 1.84
RPUSD3-209ENST00000451405 PREX2Q70Z35 1606 aa26.5■■□□□ 1.83
RPUSD3-209ENST00000451405 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
RPUSD3-209ENST00000451405 C9orf84Q5VXU9 1444 aa26.49■■□□□ 1.83
RPUSD3-209ENST00000451405 ARHGEF12Q9NZN5 1544 aa26.49■■□□□ 1.83
RPUSD3-209ENST00000451405 CDC42BPAQ5VT25 1732 aa26.47■■□□□ 1.83
RPUSD3-209ENST00000451405 KDM5CP41229 1560 aa26.46■■□□□ 1.83
RPUSD3-209ENST00000451405 TRAPPC8Q9Y2L5 1435 aa26.46■■□□□ 1.83
RPUSD3-209ENST00000451405 UHRF1BP1Q6BDS2 1440 aa26.45■■□□□ 1.82
RPUSD3-209ENST00000451405 ESF1Q9H501 851 aaKnown RBP26.44■■□□□ 1.82
RPUSD3-209ENST00000451405 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
RPUSD3-209ENST00000451405 PREX1Q8TCU6 1659 aa26.42■■□□□ 1.82
RPUSD3-209ENST00000451405 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
RPUSD3-209ENST00000451405 ZNF777Q9ULD5 760 aaPredicted RBP26.42■■□□□ 1.82
RPUSD3-209ENST00000451405 ABCC1P33527 1531 aa26.42■■□□□ 1.82
RPUSD3-209ENST00000451405 GPATCH8Q9UKJ3 1502 aaKnown RBP26.42■■□□□ 1.82
RPUSD3-209ENST00000451405 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.82
RPUSD3-209ENST00000451405 MLH3Q9UHC1 1453 aa26.39■■□□□ 1.82
RPUSD3-209ENST00000451405 DIP2CQ9Y2E4 1556 aa26.37■■□□□ 1.81
RPUSD3-209ENST00000451405 MTUS2Q5JR59 1369 aa26.36■■□□□ 1.81
RPUSD3-209ENST00000451405 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
RPUSD3-209ENST00000451405 SAMD9LQ8IVG5 1584 aa26.35■■□□□ 1.81
RPUSD3-209ENST00000451405 ABCA6Q8N139 1617 aa26.34■■□□□ 1.81
RPUSD3-209ENST00000451405 CFDP1Q9UEE9 299 aaPredicted RBP26.33■■□□□ 1.81
RPUSD3-209ENST00000451405 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
RPUSD3-209ENST00000451405 PTPRTO14522 1441 aa26.32■■□□□ 1.8
RPUSD3-209ENST00000451405 STRCQ7RTU9 1775 aa26.31■■□□□ 1.8
RPUSD3-209ENST00000451405 KIDINS220Q9ULH0 1771 aa26.31■■□□□ 1.8
RPUSD3-209ENST00000451405 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
RPUSD3-209ENST00000451405 REREQ9P2R6 1566 aa26.29■■□□□ 1.8
RPUSD3-209ENST00000451405 SETD1BQ9UPS6 1966 aaKnown RBP26.28■■□□□ 1.8
RPUSD3-209ENST00000451405 ZNF644Q9H582 1327 aaPredicted RBP26.26■■□□□ 1.79
RPUSD3-209ENST00000451405 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
RPUSD3-209ENST00000451405 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
RPUSD3-209ENST00000451405 SPAG9O60271 1321 aaKnown RBP26.24■■□□□ 1.79
RPUSD3-209ENST00000451405 EHBP1L1Q8N3D4 1523 aa26.24■■□□□ 1.79
RPUSD3-209ENST00000451405 AGLP35573 1532 aa26.23■■□□□ 1.79
RPUSD3-209ENST00000451405 TIAM1Q13009 1591 aa26.22■■□□□ 1.79
RPUSD3-209ENST00000451405 PLEKHH2Q8IVE3 1493 aa26.2■■□□□ 1.78
RPUSD3-209ENST00000451405 CNTLNQ9NXG0 1405 aa26.15■■□□□ 1.78
RPUSD3-209ENST00000451405 NCOA1Q15788 1441 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 ATP7AQ04656 1500 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 UBAP1LF5GYI3 381 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 IQSEC2Q5JU85 1478 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 MBD5Q9P267 1494 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 C3P01024 1663 aa26.14■■□□□ 1.78
RPUSD3-209ENST00000451405 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
RPUSD3-209ENST00000451405 NCOA2Q15596 1464 aa26.13■■□□□ 1.77
RPUSD3-209ENST00000451405 INO80Q9ULG1 1556 aaPredicted RBP26.12■■□□□ 1.77
RPUSD3-209ENST00000451405 NCKAP5LQ9HCH0 1330 aa26.12■■□□□ 1.77
RPUSD3-209ENST00000451405 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
RPUSD3-209ENST00000451405 A2MP01023 1474 aa26.08■■□□□ 1.77
RPUSD3-209ENST00000451405 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
RPUSD3-209ENST00000451405 ZNF335Q9H4Z2 1342 aaPredicted RBP26.06■■□□□ 1.76
RPUSD3-209ENST00000451405 ZMYM3Q14202 1370 aa26.06■■□□□ 1.76
RPUSD3-209ENST00000451405 LRRC9Q6ZRR7 1453 aa26.05■■□□□ 1.76
RPUSD3-209ENST00000451405 NPATQ14207 1427 aa26.05■■□□□ 1.76
RPUSD3-209ENST00000451405 PLXNC1O60486 1568 aa26.04■■□□□ 1.76
RPUSD3-209ENST00000451405 CAMSAP1Q5T5Y3 1602 aa26.04■■□□□ 1.76
RPUSD3-209ENST00000451405 PKD2Q13563 968 aa26.03■■□□□ 1.76
RPUSD3-209ENST00000451405 GGT6Q6P531 493 aa26.03■■□□□ 1.76
RPUSD3-209ENST00000451405 CAMSAP2Q08AD1 1489 aa26.02■■□□□ 1.76
RPUSD3-209ENST00000451405 RTEL1-TNFRSF6BF6WH68 1400 aa26.01■■□□□ 1.75
RPUSD3-209ENST00000451405 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
RPUSD3-209ENST00000451405 RSPH4AQ5TD94 716 aa25.97■■□□□ 1.75
RPUSD3-209ENST00000451405 MAP3K1Q13233 1512 aa25.97■■□□□ 1.75
RPUSD3-209ENST00000451405 CCDC141Q6ZP82 1450 aa25.97■■□□□ 1.75
RPUSD3-209ENST00000451405 DHX29Q7Z478 1369 aaKnown RBP25.96■■□□□ 1.75
RPUSD3-209ENST00000451405 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
RPUSD3-209ENST00000451405 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
RPUSD3-209ENST00000451405 CLTCQ00610 1675 aaKnown RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms