RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 L3MBTL2Q969R5 705 aa16.01■□□□□ 0.15
TNXB-203ENST00000451343 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
TNXB-203ENST00000451343 ARHGEF11O15085 1522 aa16■□□□□ 0.15
TNXB-203ENST00000451343 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
TNXB-203ENST00000451343 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
TNXB-203ENST00000451343 UBE2Q2Q8WVN8 375 aa15.98■□□□□ 0.15
TNXB-203ENST00000451343 ADAMTS12P58397 1594 aa15.98■□□□□ 0.15
TNXB-203ENST00000451343 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
TNXB-203ENST00000451343 ZNF644Q9H582 1327 aaPredicted RBP15.96■□□□□ 0.15
TNXB-203ENST00000451343 TCOF1Q13428 1488 aaKnown RBP15.96■□□□□ 0.15
TNXB-203ENST00000451343 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
TNXB-203ENST00000451343 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
TNXB-203ENST00000451343 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
TNXB-203ENST00000451343 GCC2Q8IWJ2 1684 aa15.94■□□□□ 0.14
TNXB-203ENST00000451343 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
TNXB-203ENST00000451343 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
TNXB-203ENST00000451343 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
TNXB-203ENST00000451343 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
TNXB-203ENST00000451343 CCDC7Q96M83 1385 aa15.89■□□□□ 0.13
TNXB-203ENST00000451343 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
TNXB-203ENST00000451343 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
TNXB-203ENST00000451343 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
TNXB-203ENST00000451343 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
TNXB-203ENST00000451343 MIA2Q96PC5 1412 aa15.87■□□□□ 0.13
TNXB-203ENST00000451343 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
TNXB-203ENST00000451343 GRIN2AQ12879 1464 aa15.87■□□□□ 0.13
TNXB-203ENST00000451343 DAPK1P53355 1430 aa15.86■□□□□ 0.13
TNXB-203ENST00000451343 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
TNXB-203ENST00000451343 ANKRD30BQ9BXX2 1392 aa15.86■□□□□ 0.13
TNXB-203ENST00000451343 POLR3GLQ9BT43 218 aa15.85■□□□□ 0.13
TNXB-203ENST00000451343 NCOA1Q15788 1441 aa15.85■□□□□ 0.13
TNXB-203ENST00000451343 ABCC5O15440 1437 aa15.85■□□□□ 0.13
TNXB-203ENST00000451343 MSH5O43196 834 aa15.85■□□□□ 0.13
TNXB-203ENST00000451343 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
TNXB-203ENST00000451343 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
TNXB-203ENST00000451343 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
TNXB-203ENST00000451343 ZNF777Q9ULD5 760 aaPredicted RBP15.82■□□□□ 0.12
TNXB-203ENST00000451343 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
TNXB-203ENST00000451343 TEX14Q8IWB6 1497 aa15.82■□□□□ 0.12
TNXB-203ENST00000451343 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
TNXB-203ENST00000451343 CDK11AQ9UQ88 783 aaPredicted RBP15.8■□□□□ 0.12
TNXB-203ENST00000451343 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
TNXB-203ENST00000451343 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
TNXB-203ENST00000451343 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
TNXB-203ENST00000451343 CEP170Q5SW79 1584 aa15.78■□□□□ 0.12
TNXB-203ENST00000451343 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
TNXB-203ENST00000451343 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
TNXB-203ENST00000451343 ROCK1Q13464 1354 aa15.77■□□□□ 0.11
TNXB-203ENST00000451343 DNMT1P26358 1616 aaKnown RBP15.77■□□□□ 0.11
TNXB-203ENST00000451343 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
TNXB-203ENST00000451343 SPATA31E1Q6ZUB1 1445 aa15.76■□□□□ 0.11
TNXB-203ENST00000451343 KIAA0556O60303 1618 aa15.75■□□□□ 0.11
TNXB-203ENST00000451343 PKNOX2Q96KN3 472 aa15.75■□□□□ 0.11
TNXB-203ENST00000451343 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
TNXB-203ENST00000451343 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
TNXB-203ENST00000451343 PLB1Q6P1J6 1458 aa15.74■□□□□ 0.11
TNXB-203ENST00000451343 PZPP20742 1482 aa15.74■□□□□ 0.11
TNXB-203ENST00000451343 ZBED9Q6R2W3 1325 aa15.74■□□□□ 0.11
TNXB-203ENST00000451343 PKD2Q13563 968 aa15.72■□□□□ 0.11
TNXB-203ENST00000451343 CHD1O14646 1710 aa15.71■□□□□ 0.11
TNXB-203ENST00000451343 CAMSAP2Q08AD1 1489 aa15.71■□□□□ 0.11
TNXB-203ENST00000451343 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
TNXB-203ENST00000451343 NUP160Q12769 1436 aa15.7■□□□□ 0.1
TNXB-203ENST00000451343 USP47Q96K76 1375 aa15.69■□□□□ 0.1
TNXB-203ENST00000451343 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
TNXB-203ENST00000451343 CARMIL2Q6F5E8 1435 aa15.69■□□□□ 0.1
TNXB-203ENST00000451343 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
TNXB-203ENST00000451343 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
TNXB-203ENST00000451343 KIF14Q15058 1648 aa15.67■□□□□ 0.1
TNXB-203ENST00000451343 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
TNXB-203ENST00000451343 BCORL1Q5H9F3 1711 aa15.66■□□□□ 0.1
TNXB-203ENST00000451343 GPATCH8Q9UKJ3 1502 aaKnown RBP15.66■□□□□ 0.1
TNXB-203ENST00000451343 KDM2AQ9Y2K7 1162 aa15.66■□□□□ 0.1
TNXB-203ENST00000451343 KIAA1107Q9UPP5 1409 aa15.65■□□□□ 0.1
TNXB-203ENST00000451343 ERICH6BQ5W0A0 696 aa15.64■□□□□ 0.09
TNXB-203ENST00000451343 PLEKHD1A6NEE1 506 aa15.63■□□□□ 0.09
TNXB-203ENST00000451343 MBD5Q9P267 1494 aa15.63■□□□□ 0.09
TNXB-203ENST00000451343 NUP155O75694 1391 aa15.61■□□□□ 0.09
TNXB-203ENST00000451343 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
TNXB-203ENST00000451343 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
TNXB-203ENST00000451343 PTPRGP23470 1445 aa15.6■□□□□ 0.09
TNXB-203ENST00000451343 ANKRD30AQ9BXX3 1397 aa15.6■□□□□ 0.09
TNXB-203ENST00000451343 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
TNXB-203ENST00000451343 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
TNXB-203ENST00000451343 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
TNXB-203ENST00000451343 ST20-MTHFSA0A0A6YYL1 179 aa15.57■□□□□ 0.08
TNXB-203ENST00000451343 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
TNXB-203ENST00000451343 SMG6Q86US8 1419 aaKnown RBP15.57■□□□□ 0.08
TNXB-203ENST00000451343 KDM5CP41229 1560 aa15.57■□□□□ 0.08
TNXB-203ENST00000451343 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
TNXB-203ENST00000451343 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
TNXB-203ENST00000451343 ADGRL2O95490 1459 aa15.56■□□□□ 0.08
TNXB-203ENST00000451343 DCAF11Q8TEB1 546 aa15.56■□□□□ 0.08
TNXB-203ENST00000451343 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
TNXB-203ENST00000451343 C9orf84Q5VXU9 1444 aa15.54■□□□□ 0.08
TNXB-203ENST00000451343 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
TNXB-203ENST00000451343 CROCC2H7BZ55 1655 aa15.53■□□□□ 0.08
TNXB-203ENST00000451343 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
TNXB-203ENST00000451343 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
TNXB-203ENST00000451343 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms