RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 FBLN2P98095 1184 aa31.09■■■□□ 2.57
TTC3-210ENST00000450533 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
TTC3-210ENST00000450533 BCANQ96GW7 911 aa31.09■■■□□ 2.57
TTC3-210ENST00000450533 WASHC2AQ641Q2 1341 aa31.08■■■□□ 2.57
TTC3-210ENST00000450533 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.57
TTC3-210ENST00000450533 ROCK1Q13464 1354 aa31.07■■■□□ 2.56
TTC3-210ENST00000450533 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.56
TTC3-210ENST00000450533 FKBP8Q14318 412 aa31.06■■■□□ 2.56
TTC3-210ENST00000450533 PLB1Q6P1J6 1458 aa31.03■■■□□ 2.56
TTC3-210ENST00000450533 EIF4G2P78344 907 aaKnown RBP eCLIP31.03■■■□□ 2.563e-6■■■□□ 15.8
TTC3-210ENST00000450533 CEP170Q5SW79 1584 aa31.01■■■□□ 2.56
TTC3-210ENST00000450533 SLC4A1APQ9BWU0 796 aaKnown RBP31■■■□□ 2.55
TTC3-210ENST00000450533 ANKRD30BQ9BXX2 1392 aa31■■■□□ 2.55
TTC3-210ENST00000450533 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
TTC3-210ENST00000450533 CFDP1Q9UEE9 299 aaPredicted RBP30.99■■■□□ 2.55
TTC3-210ENST00000450533 TROQ12816 1431 aaPredicted RBP30.98■■■□□ 2.55
TTC3-210ENST00000450533 ZNF777Q9ULD5 760 aaPredicted RBP30.97■■■□□ 2.55
TTC3-210ENST00000450533 SYNJ2O15056 1496 aa30.96■■■□□ 2.55
TTC3-210ENST00000450533 RPRD2Q5VT52 1461 aaKnown RBP30.94■■■□□ 2.54
TTC3-210ENST00000450533 CAMSAP2Q08AD1 1489 aa30.94■■■□□ 2.54
TTC3-210ENST00000450533 NBPF8Q3BBV2 869 aa30.93■■■□□ 2.54
TTC3-210ENST00000450533 C11orf95C9JLR9 678 aaPredicted RBP30.91■■■□□ 2.54
TTC3-210ENST00000450533 KIF14Q15058 1648 aa30.91■■■□□ 2.54
TTC3-210ENST00000450533 JPH4Q96JJ6 628 aa30.9■■■□□ 2.54
TTC3-210ENST00000450533 TSHZ2Q9NRE2 1034 aa30.9■■■□□ 2.54
TTC3-210ENST00000450533 GPATCH8Q9UKJ3 1502 aaKnown RBP30.9■■■□□ 2.54
TTC3-210ENST00000450533 NEFLP07196 543 aa30.88■■■□□ 2.53
TTC3-210ENST00000450533 TEX14Q8IWB6 1497 aa30.88■■■□□ 2.53
TTC3-210ENST00000450533 CARMIL2Q6F5E8 1435 aa30.86■■■□□ 2.53
TTC3-210ENST00000450533 NCOA1Q15788 1441 aa30.85■■■□□ 2.53
TTC3-210ENST00000450533 HNRNPUQ00839 825 aaKnown RBP eCLIP30.85■■■□□ 2.53
TTC3-210ENST00000450533 ITSN2Q9NZM3 1697 aa30.84■■■□□ 2.53
TTC3-210ENST00000450533 PZPP20742 1482 aa30.83■■■□□ 2.53
TTC3-210ENST00000450533 CNTLNQ9NXG0 1405 aa30.83■■■□□ 2.53
TTC3-210ENST00000450533 CCDC7Q96M83 1385 aa30.81■■■□□ 2.52
TTC3-210ENST00000450533 NUP160Q12769 1436 aa30.81■■■□□ 2.52
TTC3-210ENST00000450533 ADCY10Q96PN6 1610 aa30.78■■■□□ 2.52
TTC3-210ENST00000450533 CCDC184Q52MB2 194 aa30.76■■■□□ 2.52
TTC3-210ENST00000450533 ADGBQ8N7X0 1667 aa30.76■■■□□ 2.52
TTC3-210ENST00000450533 PLEKHD1A6NEE1 506 aa30.74■■■□□ 2.51
TTC3-210ENST00000450533 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
TTC3-210ENST00000450533 ANKRD30AQ9BXX3 1397 aa30.72■■■□□ 2.51
TTC3-210ENST00000450533 PKD2Q13563 968 aa30.71■■■□□ 2.51
TTC3-210ENST00000450533 CROCC2H7BZ55 1655 aa30.71■■■□□ 2.51
TTC3-210ENST00000450533 SPATA31E1Q6ZUB1 1445 aa30.7■■■□□ 2.51
TTC3-210ENST00000450533 PRKRIP1Q9H875 184 aaPredicted RBP30.7■■■□□ 2.5
TTC3-210ENST00000450533 KIF7Q2M1P5 1343 aa30.69■■■□□ 2.5
TTC3-210ENST00000450533 KIAA1107Q9UPP5 1409 aa30.69■■■□□ 2.5
TTC3-210ENST00000450533 ZNF326Q5BKZ1 582 aaKnown RBP30.69■■■□□ 2.5
TTC3-210ENST00000450533 ATP10BO94823 1461 aa30.67■■■□□ 2.5
TTC3-210ENST00000450533 ANKRD50Q9ULJ7 1429 aa30.67■■■□□ 2.5
TTC3-210ENST00000450533 ABCA8O94911 1581 aa30.66■■■□□ 2.5
TTC3-210ENST00000450533 CDC42BPAQ5VT25 1732 aa30.65■■■□□ 2.5
TTC3-210ENST00000450533 ABCC10Q5T3U5 1492 aa30.62■■■□□ 2.49
TTC3-210ENST00000450533 FAM9BQ8IZU0 186 aa30.62■■■□□ 2.49
TTC3-210ENST00000450533 MRS2Q9HD23 443 aa30.59■■■□□ 2.49
TTC3-210ENST00000450533 C9orf84Q5VXU9 1444 aa30.59■■■□□ 2.49
TTC3-210ENST00000450533 MBD5Q9P267 1494 aa30.59■■■□□ 2.49
TTC3-210ENST00000450533 NUP155O75694 1391 aa30.58■■■□□ 2.49
TTC3-210ENST00000450533 IRX6P78412 446 aaPredicted RBP30.57■■■□□ 2.48
TTC3-210ENST00000450533 HNRNPMP52272 730 aaKnown RBP eCLIP30.56■■■□□ 2.483e-7■■■■□ 21.3
TTC3-210ENST00000450533 POLR3GLQ9BT43 218 aa30.55■■■□□ 2.48
TTC3-210ENST00000450533 TSPY4P0CV99 314 aa30.55■■■□□ 2.48
TTC3-210ENST00000450533 TSPY10P0CW01 314 aa30.55■■■□□ 2.48
TTC3-210ENST00000450533 USP47Q96K76 1375 aa30.53■■■□□ 2.48
TTC3-210ENST00000450533 POLR1AO95602 1720 aaPredicted RBP30.53■■■□□ 2.48
TTC3-210ENST00000450533 CNGB1Q14028 1251 aaPredicted RBP30.53■■■□□ 2.48
TTC3-210ENST00000450533 MYT1Q01538 1121 aa30.51■■■□□ 2.48
TTC3-210ENST00000450533 SHANK2Q9UPX8 1470 aa30.51■■■□□ 2.48
TTC3-210ENST00000450533 PTPRGP23470 1445 aa30.49■■■□□ 2.47
TTC3-210ENST00000450533 KIF15Q9NS87 1388 aa30.47■■■□□ 2.47
TTC3-210ENST00000450533 BCORL1Q5H9F3 1711 aa30.46■■■□□ 2.47
TTC3-210ENST00000450533 KDM2AQ9Y2K7 1162 aa30.42■■■□□ 2.46
TTC3-210ENST00000450533 KDM5CP41229 1560 aa30.4■■■□□ 2.46
TTC3-210ENST00000450533 DHX29Q7Z478 1369 aaKnown RBP30.4■■■□□ 2.46
TTC3-210ENST00000450533 CARD11Q9BXL7 1154 aa30.38■■■□□ 2.45
TTC3-210ENST00000450533 ZBED9Q6R2W3 1325 aa30.37■■■□□ 2.45
TTC3-210ENST00000450533 UHRF1BP1Q6BDS2 1440 aa30.36■■■□□ 2.45
TTC3-210ENST00000450533 KDM5DQ9BY66 1539 aa30.36■■■□□ 2.45
TTC3-210ENST00000450533 ARHGEF5Q12774 1597 aa30.36■■■□□ 2.45
TTC3-210ENST00000450533 SAMD9LQ8IVG5 1584 aa30.36■■■□□ 2.45
TTC3-210ENST00000450533 RBM19Q9Y4C8 960 aaKnown RBP30.35■■■□□ 2.45
TTC3-210ENST00000450533 RALGAPBQ86X10 1494 aa30.34■■■□□ 2.45
TTC3-210ENST00000450533 DCAF11Q8TEB1 546 aa30.34■■■□□ 2.45
TTC3-210ENST00000450533 CDC42BPBQ9Y5S2 1711 aa30.34■■■□□ 2.45
TTC3-210ENST00000450533 CCDC141Q6ZP82 1450 aa30.33■■■□□ 2.45
TTC3-210ENST00000450533 ARHGEF12Q9NZN5 1544 aa30.3■■■□□ 2.44
TTC3-210ENST00000450533 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
TTC3-210ENST00000450533 ST20-MTHFSA0A0A6YYL1 179 aa30.27■■■□□ 2.44
TTC3-210ENST00000450533 CHD1O14646 1710 aa30.27■■■□□ 2.44
TTC3-210ENST00000450533 ARID4BQ4LE39 1312 aaPredicted RBP30.26■■■□□ 2.44
TTC3-210ENST00000450533 FAM135AQ9P2D6 1515 aa30.25■■■□□ 2.43
TTC3-210ENST00000450533 SYCP2Q9BX26 1530 aa30.24■■■□□ 2.43
TTC3-210ENST00000450533 TTC37Q6PGP7 1564 aa30.22■■■□□ 2.43
TTC3-210ENST00000450533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.435e-7■■□□□ 13.6
TTC3-210ENST00000450533 ARHGAP5Q13017 1502 aa30.22■■■□□ 2.43
TTC3-210ENST00000450533 RSPH4AQ5TD94 716 aa30.21■■■□□ 2.43
TTC3-210ENST00000450533 SENP3-EIF4A1A0A087X0R7 540 aa30.21■■■□□ 2.43
TTC3-210ENST00000450533 ROCK2O75116 1388 aaKnown RBP30.19■■■□□ 2.42
TTC3-210ENST00000450533 RGL3Q3MIN7 710 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms