RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ABCC5O15440 1437 aa21.13■□□□□ 0.97
USP39-207ENST00000450066 NAIPQ13075 1403 aa21.12■□□□□ 0.97
USP39-207ENST00000450066 PREX2Q70Z35 1606 aa21.12■□□□□ 0.97
USP39-207ENST00000450066 TTC37Q6PGP7 1564 aa21.12■□□□□ 0.97
USP39-207ENST00000450066 ZNF777Q9ULD5 760 aaPredicted RBP21.11■□□□□ 0.97
USP39-207ENST00000450066 KCNH8Q96L42 1107 aa21.09■□□□□ 0.97
USP39-207ENST00000450066 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
USP39-207ENST00000450066 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
USP39-207ENST00000450066 CDC42BPBQ9Y5S2 1711 aa21.08■□□□□ 0.97
USP39-207ENST00000450066 WDR7Q9Y4E6 1490 aa21.08■□□□□ 0.97
USP39-207ENST00000450066 GCC2Q8IWJ2 1684 aa21.06■□□□□ 0.96
USP39-207ENST00000450066 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
USP39-207ENST00000450066 NPM1P06748 294 aaKnown RBP eCLIP21.05■□□□□ 0.96
USP39-207ENST00000450066 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
USP39-207ENST00000450066 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
USP39-207ENST00000450066 CROCC2H7BZ55 1655 aa21.03■□□□□ 0.96
USP39-207ENST00000450066 ARHGAP5Q13017 1502 aa21.03■□□□□ 0.96
USP39-207ENST00000450066 PLCH2O75038 1416 aa21.02■□□□□ 0.96
USP39-207ENST00000450066 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.96
USP39-207ENST00000450066 ARHGEF5Q12774 1597 aa21.01■□□□□ 0.95
USP39-207ENST00000450066 SHANK2Q9UPX8 1470 aa21■□□□□ 0.95
USP39-207ENST00000450066 ADGRL2O95490 1459 aa21■□□□□ 0.95
USP39-207ENST00000450066 MBD5Q9P267 1494 aa21■□□□□ 0.95
USP39-207ENST00000450066 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 ADGBQ8N7X0 1667 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 ARAP3Q8WWN8 1544 aa20.98■□□□□ 0.95
USP39-207ENST00000450066 PLEKHH2Q8IVE3 1493 aa20.97■□□□□ 0.95
USP39-207ENST00000450066 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
USP39-207ENST00000450066 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
USP39-207ENST00000450066 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
USP39-207ENST00000450066 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
USP39-207ENST00000450066 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
USP39-207ENST00000450066 HNRNPMP52272 730 aaKnown RBP eCLIP20.96■□□□□ 0.95
USP39-207ENST00000450066 EFCAB2Q5VUJ9 269 aa20.95■□□□□ 0.94
USP39-207ENST00000450066 ANKRD30AQ9BXX3 1397 aa20.95■□□□□ 0.94
USP39-207ENST00000450066 CCDC141Q6ZP82 1450 aa20.95■□□□□ 0.94
USP39-207ENST00000450066 TSPY4P0CV99 314 aa20.95■□□□□ 0.94
USP39-207ENST00000450066 TSPY10P0CW01 314 aa20.95■□□□□ 0.94
USP39-207ENST00000450066 C9orf84Q5VXU9 1444 aa20.94■□□□□ 0.94
USP39-207ENST00000450066 KDM6BO15054 1643 aa20.93■□□□□ 0.94
USP39-207ENST00000450066 SYCP2Q9BX26 1530 aa20.93■□□□□ 0.94
USP39-207ENST00000450066 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
USP39-207ENST00000450066 ABCC1P33527 1531 aa20.87■□□□□ 0.93
USP39-207ENST00000450066 ARHGEF12Q9NZN5 1544 aa20.87■□□□□ 0.93
USP39-207ENST00000450066 MAST1Q9Y2H9 1570 aa20.86■□□□□ 0.93
USP39-207ENST00000450066 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
USP39-207ENST00000450066 FANCAO15360 1455 aa20.84■□□□□ 0.93
USP39-207ENST00000450066 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.93
USP39-207ENST00000450066 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
USP39-207ENST00000450066 CD109Q6YHK3 1445 aa20.79■□□□□ 0.92
USP39-207ENST00000450066 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
USP39-207ENST00000450066 PLXNC1O60486 1568 aa20.78■□□□□ 0.92
USP39-207ENST00000450066 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
USP39-207ENST00000450066 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
USP39-207ENST00000450066 ADGRL1O94910 1474 aa20.75■□□□□ 0.91
USP39-207ENST00000450066 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
USP39-207ENST00000450066 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
USP39-207ENST00000450066 CFAP74Q9C0B2 1584 aa20.74■□□□□ 0.91
USP39-207ENST00000450066 RTEL1-TNFRSF6BF6WH68 1400 aa20.73■□□□□ 0.91
USP39-207ENST00000450066 SCAPERQ9BY12 1400 aa20.73■□□□□ 0.91
USP39-207ENST00000450066 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
USP39-207ENST00000450066 PZPP20742 1482 aa20.71■□□□□ 0.91
USP39-207ENST00000450066 AFAP1Q8N556 730 aa20.71■□□□□ 0.91
USP39-207ENST00000450066 SPAG9O60271 1321 aaKnown RBP20.71■□□□□ 0.91
USP39-207ENST00000450066 GLI2P10070 1586 aa20.71■□□□□ 0.91
USP39-207ENST00000450066 SLC4A1APQ9BWU0 796 aaKnown RBP20.71■□□□□ 0.91
USP39-207ENST00000450066 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
USP39-207ENST00000450066 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
USP39-207ENST00000450066 ZFYVE16Q7Z3T8 1539 aa20.68■□□□□ 0.9
USP39-207ENST00000450066 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
USP39-207ENST00000450066 NEO1Q92859 1461 aa20.67■□□□□ 0.9
USP39-207ENST00000450066 ERBINQ96RT1 1412 aa20.67■□□□□ 0.9
USP39-207ENST00000450066 NUP155O75694 1391 aa20.67■□□□□ 0.9
USP39-207ENST00000450066 INO80Q9ULG1 1556 aaPredicted RBP20.65■□□□□ 0.9
USP39-207ENST00000450066 ZNF518AQ6AHZ1 1483 aa20.65■□□□□ 0.9
USP39-207ENST00000450066 ANKRD30BQ9BXX2 1392 aa20.64■□□□□ 0.9
USP39-207ENST00000450066 ATP7AQ04656 1500 aa20.64■□□□□ 0.89
USP39-207ENST00000450066 DIP2BQ9P265 1576 aa20.63■□□□□ 0.89
USP39-207ENST00000450066 FOXD1Q16676 465 aa20.62■□□□□ 0.89
USP39-207ENST00000450066 UNC13BO14795 1591 aa20.62■□□□□ 0.89
USP39-207ENST00000450066 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
USP39-207ENST00000450066 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
USP39-207ENST00000450066 FAM69CQ0P6D2 419 aa20.6■□□□□ 0.89
USP39-207ENST00000450066 PKD2Q13563 968 aa20.59■□□□□ 0.89
USP39-207ENST00000450066 KDM5CP41229 1560 aa20.59■□□□□ 0.89
USP39-207ENST00000450066 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
USP39-207ENST00000450066 FAM135AQ9P2D6 1515 aa20.57■□□□□ 0.88
USP39-207ENST00000450066 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
USP39-207ENST00000450066 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
USP39-207ENST00000450066 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
USP39-207ENST00000450066 KIDINS220Q9ULH0 1771 aa20.55■□□□□ 0.88
USP39-207ENST00000450066 MLH3Q9UHC1 1453 aa20.55■□□□□ 0.88
USP39-207ENST00000450066 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
USP39-207ENST00000450066 IQGAP3Q86VI3 1631 aa20.54■□□□□ 0.88
USP39-207ENST00000450066 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
USP39-207ENST00000450066 HECW2Q9P2P5 1572 aa20.51■□□□□ 0.87
USP39-207ENST00000450066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.873e-6■□□□□ 10.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms