RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ZMYM4Q5VZL5 1548 aa28.71■■■□□ 2.19
FAM3A-216ENST00000449971 SCAPERQ9BY12 1400 aa28.69■■■□□ 2.18
FAM3A-216ENST00000449971 HECW1Q76N89 1606 aa28.69■■■□□ 2.18
FAM3A-216ENST00000449971 CERKQ8TCT0 537 aa28.67■■■□□ 2.18
FAM3A-216ENST00000449971 MAGI2Q86UL8 1455 aa28.65■■■□□ 2.18
FAM3A-216ENST00000449971 FER1L4A9Z1Z3 1794 aa28.65■■■□□ 2.18
FAM3A-216ENST00000449971 PLCH2O75038 1416 aa28.61■■■□□ 2.17
FAM3A-216ENST00000449971 CEBPAP49715 358 aaPredicted RBP28.61■■■□□ 2.17
FAM3A-216ENST00000449971 MYT1LQ9UL68 1186 aa28.61■■■□□ 2.17
FAM3A-216ENST00000449971 EFCAB2Q5VUJ9 269 aa28.57■■■□□ 2.16
FAM3A-216ENST00000449971 ATP10AO60312 1499 aa28.56■■■□□ 2.16
FAM3A-216ENST00000449971 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
FAM3A-216ENST00000449971 ARHGEF12Q9NZN5 1544 aa28.51■■■□□ 2.15
FAM3A-216ENST00000449971 ARHGAP35Q9NRY4 1499 aa28.51■■■□□ 2.15
FAM3A-216ENST00000449971 CDK11AQ9UQ88 783 aaPredicted RBP28.5■■■□□ 2.15
FAM3A-216ENST00000449971 AFAP1Q8N556 730 aa28.49■■■□□ 2.15
FAM3A-216ENST00000449971 MYO5CQ9NQX4 1742 aa28.49■■■□□ 2.15
FAM3A-216ENST00000449971 KIF14Q15058 1648 aa28.46■■■□□ 2.15
FAM3A-216ENST00000449971 PREX1Q8TCU6 1659 aa28.45■■■□□ 2.15
FAM3A-216ENST00000449971 FMN1Q68DA7 1419 aa28.45■■■□□ 2.15
FAM3A-216ENST00000449971 ARHGAP5Q13017 1502 aa28.45■■■□□ 2.15
FAM3A-216ENST00000449971 ZNF518AQ6AHZ1 1483 aa28.42■■■□□ 2.14
FAM3A-216ENST00000449971 UHRF1BP1Q6BDS2 1440 aa28.41■■■□□ 2.14
FAM3A-216ENST00000449971 DISP3Q9P2K9 1392 aa28.4■■■□□ 2.14
FAM3A-216ENST00000449971 DMRT2Q9Y5R5 561 aa28.39■■■□□ 2.14
FAM3A-216ENST00000449971 TROQ12816 1431 aaPredicted RBP28.38■■■□□ 2.13
FAM3A-216ENST00000449971 CLIP1P30622 1438 aa28.37■■■□□ 2.13
FAM3A-216ENST00000449971 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
FAM3A-216ENST00000449971 STRCQ7RTU9 1775 aa28.34■■■□□ 2.13
FAM3A-216ENST00000449971 KDM5CP41229 1560 aa28.33■■■□□ 2.12
FAM3A-216ENST00000449971 ILDR2Q71H61 639 aa28.32■■■□□ 2.12
FAM3A-216ENST00000449971 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
FAM3A-216ENST00000449971 SETD1BQ9UPS6 1966 aaKnown RBP28.28■■■□□ 2.12
FAM3A-216ENST00000449971 ABCA6Q8N139 1617 aa28.28■■■□□ 2.12
FAM3A-216ENST00000449971 TRAPPC8Q9Y2L5 1435 aa28.26■■■□□ 2.12
FAM3A-216ENST00000449971 C3P01024 1663 aa28.24■■■□□ 2.11
FAM3A-216ENST00000449971 LRRIQ1Q96JM4 1722 aa28.23■■■□□ 2.11
FAM3A-216ENST00000449971 CDC42BPBQ9Y5S2 1711 aa28.23■■■□□ 2.11
FAM3A-216ENST00000449971 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
FAM3A-216ENST00000449971 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
FAM3A-216ENST00000449971 REREQ9P2R6 1566 aa28.2■■■□□ 2.1
FAM3A-216ENST00000449971 PTPRTO14522 1441 aa28.19■■■□□ 2.1
FAM3A-216ENST00000449971 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
FAM3A-216ENST00000449971 ABCC1P33527 1531 aa28.18■■■□□ 2.1
FAM3A-216ENST00000449971 SOCS7O14512 581 aa28.16■■■□□ 2.1
FAM3A-216ENST00000449971 PREX2Q70Z35 1606 aa28.16■■■□□ 2.1
FAM3A-216ENST00000449971 AGLP35573 1532 aa28.15■■■□□ 2.1
FAM3A-216ENST00000449971 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
FAM3A-216ENST00000449971 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
FAM3A-216ENST00000449971 KIDINS220Q9ULH0 1771 aa28.11■■■□□ 2.09
FAM3A-216ENST00000449971 NCOA1Q15788 1441 aa28.1■■■□□ 2.09
FAM3A-216ENST00000449971 CNTLNQ9NXG0 1405 aa28.1■■■□□ 2.09
FAM3A-216ENST00000449971 SPATA31D1Q6ZQQ2 1576 aa28.1■■■□□ 2.09
FAM3A-216ENST00000449971 CCDC18Q5T9S5 1454 aa28.09■■■□□ 2.09
FAM3A-216ENST00000449971 LTBP4Q8N2S1 1624 aa28.08■■■□□ 2.09
FAM3A-216ENST00000449971 HNRNPMP52272 730 aaKnown RBP eCLIP28.07■■■□□ 2.08
FAM3A-216ENST00000449971 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
FAM3A-216ENST00000449971 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
FAM3A-216ENST00000449971 FYCO1Q9BQS8 1478 aa28.07■■■□□ 2.08
FAM3A-216ENST00000449971 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
FAM3A-216ENST00000449971 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
FAM3A-216ENST00000449971 CDC42BPAQ5VT25 1732 aa28.05■■■□□ 2.08
FAM3A-216ENST00000449971 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
FAM3A-216ENST00000449971 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
FAM3A-216ENST00000449971 SYCP2Q9BX26 1530 aa28.02■■■□□ 2.08
FAM3A-216ENST00000449971 SUPT6HQ7KZ85 1726 aaKnown RBP28.01■■■□□ 2.07
FAM3A-216ENST00000449971 ZNF335Q9H4Z2 1342 aaPredicted RBP28■■■□□ 2.07
FAM3A-216ENST00000449971 NPATQ14207 1427 aa27.99■■■□□ 2.07
FAM3A-216ENST00000449971 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
FAM3A-216ENST00000449971 GGT6Q6P531 493 aa27.98■■■□□ 2.07
FAM3A-216ENST00000449971 CFDP1Q9UEE9 299 aaPredicted RBP27.95■■■□□ 2.06
FAM3A-216ENST00000449971 GPATCH8Q9UKJ3 1502 aaKnown RBP27.95■■■□□ 2.06
FAM3A-216ENST00000449971 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
FAM3A-216ENST00000449971 MROH2AA6NES4 1674 aa27.94■■■□□ 2.06
FAM3A-216ENST00000449971 CLTCQ00610 1675 aaKnown RBP27.94■■■□□ 2.06
FAM3A-216ENST00000449971 ATP7AQ04656 1500 aa27.92■■■□□ 2.06
FAM3A-216ENST00000449971 A2MP01023 1474 aa27.9■■■□□ 2.06
FAM3A-216ENST00000449971 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
FAM3A-216ENST00000449971 PKD2Q13563 968 aa27.87■■■□□ 2.05
FAM3A-216ENST00000449971 MYO3AQ8NEV4 1616 aa27.87■■■□□ 2.05
FAM3A-216ENST00000449971 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
FAM3A-216ENST00000449971 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
FAM3A-216ENST00000449971 SCAF1Q9H7N4 1312 aaKnown RBP27.85■■■□□ 2.05
FAM3A-216ENST00000449971 PPP6R1Q9UPN7 881 aa27.84■■■□□ 2.05
FAM3A-216ENST00000449971 CEP170BQ9Y4F5 1589 aaPredicted RBP27.84■■■□□ 2.05
FAM3A-216ENST00000449971 KIAA1107Q9UPP5 1409 aa27.84■■■□□ 2.05
FAM3A-216ENST00000449971 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
FAM3A-216ENST00000449971 PLXNC1O60486 1568 aa27.82■■■□□ 2.04
FAM3A-216ENST00000449971 ZNF644Q9H582 1327 aaPredicted RBP27.82■■■□□ 2.04
FAM3A-216ENST00000449971 PLA2R1Q13018 1463 aa27.82■■■□□ 2.04
FAM3A-216ENST00000449971 INO80Q9ULG1 1556 aaPredicted RBP27.82■■■□□ 2.04
FAM3A-216ENST00000449971 ZNF142P52746 1687 aaPredicted RBP27.8■■■□□ 2.04
FAM3A-216ENST00000449971 TCOF1Q13428 1488 aaKnown RBP27.78■■■□□ 2.04
FAM3A-216ENST00000449971 PIP4K2BP78356 416 aa27.78■■■□□ 2.04
FAM3A-216ENST00000449971 VPS8Q8N3P4 1428 aa27.74■■■□□ 2.03
FAM3A-216ENST00000449971 FBXO31Q5XUX0 539 aaPredicted RBP27.71■■■□□ 2.03
FAM3A-216ENST00000449971 ADGBQ8N7X0 1667 aa27.71■■■□□ 2.03
FAM3A-216ENST00000449971 A2ML1A8K2U0 1454 aa27.7■■■□□ 2.03
FAM3A-216ENST00000449971 KIF3BO15066 747 aa27.7■■■□□ 2.02
FAM3A-216ENST00000449971 HSPA1LP34931 641 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms