RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
SYNGAP1-204ENST00000449372 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.61
SYNGAP1-204ENST00000449372 NAIPQ13075 1403 aa18.83■□□□□ 0.61
SYNGAP1-204ENST00000449372 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
SYNGAP1-204ENST00000449372 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
SYNGAP1-204ENST00000449372 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
SYNGAP1-204ENST00000449372 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
SYNGAP1-204ENST00000449372 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
SYNGAP1-204ENST00000449372 EIF5BO60841 1220 aaKnown RBP18.77■□□□□ 0.59
SYNGAP1-204ENST00000449372 DNMT1P26358 1616 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-204ENST00000449372 TROQ12816 1431 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-204ENST00000449372 KIF14Q15058 1648 aa18.75■□□□□ 0.59
SYNGAP1-204ENST00000449372 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
SYNGAP1-204ENST00000449372 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
SYNGAP1-204ENST00000449372 FBLN2P98095 1184 aa18.74■□□□□ 0.59
SYNGAP1-204ENST00000449372 KDM6BO15054 1643 aa18.74■□□□□ 0.59
SYNGAP1-204ENST00000449372 PRG4Q92954 1404 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-204ENST00000449372 ITSN2Q9NZM3 1697 aa18.72■□□□□ 0.59
SYNGAP1-204ENST00000449372 DENND4BO75064 1496 aaPredicted RBP18.71■□□□□ 0.59
SYNGAP1-204ENST00000449372 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
SYNGAP1-204ENST00000449372 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
SYNGAP1-204ENST00000449372 ATP10BO94823 1461 aa18.69■□□□□ 0.58
SYNGAP1-204ENST00000449372 NBR1Q14596 966 aa18.69■□□□□ 0.58
SYNGAP1-204ENST00000449372 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
SYNGAP1-204ENST00000449372 DAPK1P53355 1430 aa18.68■□□□□ 0.58
SYNGAP1-204ENST00000449372 GPATCH8Q9UKJ3 1502 aaKnown RBP18.68■□□□□ 0.58
SYNGAP1-204ENST00000449372 CDC42BPAQ5VT25 1732 aa18.68■□□□□ 0.58
SYNGAP1-204ENST00000449372 CROCC2H7BZ55 1655 aa18.67■□□□□ 0.58
SYNGAP1-204ENST00000449372 ABCC5O15440 1437 aa18.67■□□□□ 0.58
SYNGAP1-204ENST00000449372 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
SYNGAP1-204ENST00000449372 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
SYNGAP1-204ENST00000449372 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.57
SYNGAP1-204ENST00000449372 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
SYNGAP1-204ENST00000449372 SIN3AQ96ST3 1273 aa18.64■□□□□ 0.57
SYNGAP1-204ENST00000449372 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.57
SYNGAP1-204ENST00000449372 CAMSAP2Q08AD1 1489 aa18.63■□□□□ 0.57
SYNGAP1-204ENST00000449372 KDM5BQ9UGL1 1544 aa18.63■□□□□ 0.57
SYNGAP1-204ENST00000449372 ADGBQ8N7X0 1667 aa18.62■□□□□ 0.57
SYNGAP1-204ENST00000449372 ERCC6L2Q5T890 1561 aa18.61■□□□□ 0.57
SYNGAP1-204ENST00000449372 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
SYNGAP1-204ENST00000449372 PTPRGP23470 1445 aa18.58■□□□□ 0.56
SYNGAP1-204ENST00000449372 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
SYNGAP1-204ENST00000449372 NOP58Q9Y2X3 529 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-204ENST00000449372 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
SYNGAP1-204ENST00000449372 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
SYNGAP1-204ENST00000449372 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
SYNGAP1-204ENST00000449372 ANP32CO43423 234 aa18.54■□□□□ 0.56
SYNGAP1-204ENST00000449372 CDC42BPBQ9Y5S2 1711 aa18.53■□□□□ 0.56
SYNGAP1-204ENST00000449372 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
SYNGAP1-204ENST00000449372 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
SYNGAP1-204ENST00000449372 PREX2Q70Z35 1606 aa18.52■□□□□ 0.55
SYNGAP1-204ENST00000449372 ABCC2Q92887 1545 aa18.51■□□□□ 0.55
SYNGAP1-204ENST00000449372 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
SYNGAP1-204ENST00000449372 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
SYNGAP1-204ENST00000449372 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
SYNGAP1-204ENST00000449372 ARHGEF5Q12774 1597 aa18.49■□□□□ 0.55
SYNGAP1-204ENST00000449372 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
SYNGAP1-204ENST00000449372 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
SYNGAP1-204ENST00000449372 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
SYNGAP1-204ENST00000449372 SAMD9LQ8IVG5 1584 aa18.47■□□□□ 0.55
SYNGAP1-204ENST00000449372 UHRF1BP1LA0JNW5 1464 aa18.45■□□□□ 0.54
SYNGAP1-204ENST00000449372 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
SYNGAP1-204ENST00000449372 TTC37Q6PGP7 1564 aa18.45■□□□□ 0.54
SYNGAP1-204ENST00000449372 PKNOX2Q96KN3 472 aa18.45■□□□□ 0.54
SYNGAP1-204ENST00000449372 PZPP20742 1482 aa18.45■□□□□ 0.54
SYNGAP1-204ENST00000449372 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-204ENST00000449372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.547e-8■□□□□ 9
SYNGAP1-204ENST00000449372 MPHOSPH9Q99550 1183 aa18.43■□□□□ 0.54
SYNGAP1-204ENST00000449372 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
SYNGAP1-204ENST00000449372 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
SYNGAP1-204ENST00000449372 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
SYNGAP1-204ENST00000449372 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
SYNGAP1-204ENST00000449372 MYO5CQ9NQX4 1742 aa18.38■□□□□ 0.53
SYNGAP1-204ENST00000449372 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
SYNGAP1-204ENST00000449372 RPRD2Q5VT52 1461 aaKnown RBP18.38■□□□□ 0.53
SYNGAP1-204ENST00000449372 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
SYNGAP1-204ENST00000449372 C9orf84Q5VXU9 1444 aa18.37■□□□□ 0.53
SYNGAP1-204ENST00000449372 DAXXQ9UER7 740 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-204ENST00000449372 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
SYNGAP1-204ENST00000449372 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
SYNGAP1-204ENST00000449372 CCDC141Q6ZP82 1450 aa18.32■□□□□ 0.52
SYNGAP1-204ENST00000449372 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
SYNGAP1-204ENST00000449372 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
SYNGAP1-204ENST00000449372 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
SYNGAP1-204ENST00000449372 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
SYNGAP1-204ENST00000449372 FOXD1Q16676 465 aa18.3■□□□□ 0.52
SYNGAP1-204ENST00000449372 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
SYNGAP1-204ENST00000449372 KIAA1107Q9UPP5 1409 aa18.28■□□□□ 0.52
SYNGAP1-204ENST00000449372 ARHGEF12Q9NZN5 1544 aa18.27■□□□□ 0.52
SYNGAP1-204ENST00000449372 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
SYNGAP1-204ENST00000449372 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
SYNGAP1-204ENST00000449372 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
SYNGAP1-204ENST00000449372 HNRNPMP52272 730 aaKnown RBP eCLIP18.26■□□□□ 0.51
SYNGAP1-204ENST00000449372 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
SYNGAP1-204ENST00000449372 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
SYNGAP1-204ENST00000449372 PLCH2O75038 1416 aa18.25■□□□□ 0.51
SYNGAP1-204ENST00000449372 UNC13BO14795 1591 aa18.25■□□□□ 0.51
SYNGAP1-204ENST00000449372 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
SYNGAP1-204ENST00000449372 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
SYNGAP1-204ENST00000449372 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms