RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
VSTM1-206ENST00000447872 ARHGEF40Q8TER5 1519 aa16.93■□□□□ 0.3
VSTM1-206ENST00000447872 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
VSTM1-206ENST00000447872 MLECQ14165 292 aa16.91■□□□□ 0.3
VSTM1-206ENST00000447872 HECW1Q76N89 1606 aa16.91■□□□□ 0.3
VSTM1-206ENST00000447872 TROQ12816 1431 aaPredicted RBP16.9■□□□□ 0.3
VSTM1-206ENST00000447872 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
VSTM1-206ENST00000447872 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
VSTM1-206ENST00000447872 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
VSTM1-206ENST00000447872 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
VSTM1-206ENST00000447872 CLIP1P30622 1438 aa16.89■□□□□ 0.29
VSTM1-206ENST00000447872 RICTORQ6R327 1708 aa16.89■□□□□ 0.29
VSTM1-206ENST00000447872 MADDQ8WXG6 1647 aa16.87■□□□□ 0.29
VSTM1-206ENST00000447872 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
VSTM1-206ENST00000447872 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
VSTM1-206ENST00000447872 ATP10AO60312 1499 aa16.86■□□□□ 0.29
VSTM1-206ENST00000447872 HSPA2P54652 639 aa16.85■□□□□ 0.29
VSTM1-206ENST00000447872 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
VSTM1-206ENST00000447872 KIF14Q15058 1648 aa16.82■□□□□ 0.28
VSTM1-206ENST00000447872 ARHGAP5Q13017 1502 aa16.82■□□□□ 0.28
VSTM1-206ENST00000447872 ZNF518AQ6AHZ1 1483 aa16.81■□□□□ 0.28
VSTM1-206ENST00000447872 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
VSTM1-206ENST00000447872 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
VSTM1-206ENST00000447872 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
VSTM1-206ENST00000447872 MYO5CQ9NQX4 1742 aa16.77■□□□□ 0.28
VSTM1-206ENST00000447872 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
VSTM1-206ENST00000447872 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
VSTM1-206ENST00000447872 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
VSTM1-206ENST00000447872 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
VSTM1-206ENST00000447872 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
VSTM1-206ENST00000447872 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
VSTM1-206ENST00000447872 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
VSTM1-206ENST00000447872 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
VSTM1-206ENST00000447872 KDM5CP41229 1560 aa16.72■□□□□ 0.27
VSTM1-206ENST00000447872 CFDP1Q9UEE9 299 aaPredicted RBP16.68■□□□□ 0.26
VSTM1-206ENST00000447872 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
VSTM1-206ENST00000447872 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
VSTM1-206ENST00000447872 ABCC1P33527 1531 aa16.66■□□□□ 0.26
VSTM1-206ENST00000447872 DIP2CQ9Y2E4 1556 aa16.66■□□□□ 0.26
VSTM1-206ENST00000447872 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
VSTM1-206ENST00000447872 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
VSTM1-206ENST00000447872 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
VSTM1-206ENST00000447872 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
VSTM1-206ENST00000447872 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
VSTM1-206ENST00000447872 CDC42BPBQ9Y5S2 1711 aa16.65■□□□□ 0.26
VSTM1-206ENST00000447872 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.26
VSTM1-206ENST00000447872 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.26
VSTM1-206ENST00000447872 REREQ9P2R6 1566 aa16.64■□□□□ 0.25
VSTM1-206ENST00000447872 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
VSTM1-206ENST00000447872 AGLP35573 1532 aa16.63■□□□□ 0.25
VSTM1-206ENST00000447872 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
VSTM1-206ENST00000447872 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
VSTM1-206ENST00000447872 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
VSTM1-206ENST00000447872 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
VSTM1-206ENST00000447872 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
VSTM1-206ENST00000447872 ITSN2Q9NZM3 1697 aa16.57■□□□□ 0.24
VSTM1-206ENST00000447872 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
VSTM1-206ENST00000447872 IQSEC2Q5JU85 1478 aa16.57■□□□□ 0.24
VSTM1-206ENST00000447872 CDC42BPAQ5VT25 1732 aa16.56■□□□□ 0.24
VSTM1-206ENST00000447872 PREX1Q8TCU6 1659 aa16.56■□□□□ 0.24
VSTM1-206ENST00000447872 ZMYM3Q14202 1370 aa16.55■□□□□ 0.24
VSTM1-206ENST00000447872 ZNF644Q9H582 1327 aaPredicted RBP16.55■□□□□ 0.24
VSTM1-206ENST00000447872 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
VSTM1-206ENST00000447872 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
VSTM1-206ENST00000447872 GGT6Q6P531 493 aa16.53■□□□□ 0.24
VSTM1-206ENST00000447872 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
VSTM1-206ENST00000447872 A2MP01023 1474 aa16.52■□□□□ 0.23
VSTM1-206ENST00000447872 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
VSTM1-206ENST00000447872 NPATQ14207 1427 aa16.51■□□□□ 0.23
VSTM1-206ENST00000447872 PTPRTO14522 1441 aa16.5■□□□□ 0.23
VSTM1-206ENST00000447872 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
VSTM1-206ENST00000447872 C3P01024 1663 aa16.49■□□□□ 0.23
VSTM1-206ENST00000447872 STRCQ7RTU9 1775 aa16.49■□□□□ 0.23
VSTM1-206ENST00000447872 RSPH4AQ5TD94 716 aa16.48■□□□□ 0.23
VSTM1-206ENST00000447872 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
VSTM1-206ENST00000447872 EHBP1L1Q8N3D4 1523 aa16.47■□□□□ 0.23
VSTM1-206ENST00000447872 LTBP4Q8N2S1 1624 aa16.47■□□□□ 0.23
VSTM1-206ENST00000447872 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
VSTM1-206ENST00000447872 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
VSTM1-206ENST00000447872 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
VSTM1-206ENST00000447872 TIAM1Q13009 1591 aa16.45■□□□□ 0.22
VSTM1-206ENST00000447872 INO80Q9ULG1 1556 aaPredicted RBP16.45■□□□□ 0.22
VSTM1-206ENST00000447872 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
VSTM1-206ENST00000447872 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
VSTM1-206ENST00000447872 PLXNC1O60486 1568 aa16.43■□□□□ 0.22
VSTM1-206ENST00000447872 KIF3BO15066 747 aa16.43■□□□□ 0.22
VSTM1-206ENST00000447872 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
VSTM1-206ENST00000447872 NCKAP5LQ9HCH0 1330 aa16.43■□□□□ 0.22
VSTM1-206ENST00000447872 NCOA2Q15596 1464 aa16.42■□□□□ 0.22
VSTM1-206ENST00000447872 TSPY4P0CV99 314 aa16.42■□□□□ 0.22
VSTM1-206ENST00000447872 TSPY10P0CW01 314 aa16.42■□□□□ 0.22
VSTM1-206ENST00000447872 PKD2Q13563 968 aa16.42■□□□□ 0.22
VSTM1-206ENST00000447872 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
VSTM1-206ENST00000447872 UBAP1LF5GYI3 381 aa16.41■□□□□ 0.22
VSTM1-206ENST00000447872 MROH2AA6NES4 1674 aa16.4■□□□□ 0.22
VSTM1-206ENST00000447872 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
VSTM1-206ENST00000447872 CAMSAP1Q5T5Y3 1602 aa16.38■□□□□ 0.21
VSTM1-206ENST00000447872 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
VSTM1-206ENST00000447872 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
VSTM1-206ENST00000447872 CAMSAP2Q08AD1 1489 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms