RNA–Protein interactions for RNA: ENST00000447275.7

PDE4C-203, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-203ENST00000447275 TRIM52Q96A61 297 aa16.2■□□□□ 0.18
PDE4C-203ENST00000447275 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
PDE4C-203ENST00000447275 CHIC2Q9UKJ5 165 aa16.2■□□□□ 0.18
PDE4C-203ENST00000447275 ADCY10Q96PN6 1610 aa16.2■□□□□ 0.18
PDE4C-203ENST00000447275 CDK11AQ9UQ88 783 aaPredicted RBP16.19■□□□□ 0.18
PDE4C-203ENST00000447275 GCC2Q8IWJ2 1684 aa16.19■□□□□ 0.18
PDE4C-203ENST00000447275 TROQ12816 1431 aaPredicted RBP16.18■□□□□ 0.18
PDE4C-203ENST00000447275 MSH5O43196 834 aa16.17■□□□□ 0.18
PDE4C-203ENST00000447275 AKNAQ7Z591 1439 aa16.17■□□□□ 0.18
PDE4C-203ENST00000447275 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
PDE4C-203ENST00000447275 RRP7BPQ9NSQ0 103 aa16.17■□□□□ 0.18
PDE4C-203ENST00000447275 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
PDE4C-203ENST00000447275 ZNF644Q9H582 1327 aaPredicted RBP16.16■□□□□ 0.18
PDE4C-203ENST00000447275 KIF14Q15058 1648 aa16.16■□□□□ 0.18
PDE4C-203ENST00000447275 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
PDE4C-203ENST00000447275 ANP32CO43423 234 aa16.15■□□□□ 0.18
PDE4C-203ENST00000447275 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
PDE4C-203ENST00000447275 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
PDE4C-203ENST00000447275 ATP10BO94823 1461 aa16.13■□□□□ 0.17
PDE4C-203ENST00000447275 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
PDE4C-203ENST00000447275 PTPRGP23470 1445 aa16.13■□□□□ 0.17
PDE4C-203ENST00000447275 HIRIP3Q9BW71 556 aaPredicted RBP16.13■□□□□ 0.17
PDE4C-203ENST00000447275 KDM6BO15054 1643 aa16.11■□□□□ 0.17
PDE4C-203ENST00000447275 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
PDE4C-203ENST00000447275 DAPK1P53355 1430 aa16.1■□□□□ 0.17
PDE4C-203ENST00000447275 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
PDE4C-203ENST00000447275 ABCC5O15440 1437 aa16.09■□□□□ 0.17
PDE4C-203ENST00000447275 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
PDE4C-203ENST00000447275 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
PDE4C-203ENST00000447275 CDC42BPAQ5VT25 1732 aa16.07■□□□□ 0.16
PDE4C-203ENST00000447275 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
PDE4C-203ENST00000447275 CAMSAP2Q08AD1 1489 aa16.07■□□□□ 0.16
PDE4C-203ENST00000447275 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
PDE4C-203ENST00000447275 ZNF777Q9ULD5 760 aaPredicted RBP16.06■□□□□ 0.16
PDE4C-203ENST00000447275 ABCC10Q5T3U5 1492 aa16.05■□□□□ 0.16
PDE4C-203ENST00000447275 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
PDE4C-203ENST00000447275 CROCC2H7BZ55 1655 aa16.04■□□□□ 0.16
PDE4C-203ENST00000447275 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
PDE4C-203ENST00000447275 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
PDE4C-203ENST00000447275 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
PDE4C-203ENST00000447275 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
PDE4C-203ENST00000447275 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
PDE4C-203ENST00000447275 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
PDE4C-203ENST00000447275 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
PDE4C-203ENST00000447275 MPHOSPH9Q99550 1183 aa15.96■□□□□ 0.14
PDE4C-203ENST00000447275 KDM5BQ9UGL1 1544 aa15.95■□□□□ 0.14
PDE4C-203ENST00000447275 NCOA1Q15788 1441 aa15.95■□□□□ 0.14
PDE4C-203ENST00000447275 CDC42BPBQ9Y5S2 1711 aa15.95■□□□□ 0.14
PDE4C-203ENST00000447275 FOXD1Q16676 465 aa15.95■□□□□ 0.14
PDE4C-203ENST00000447275 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
PDE4C-203ENST00000447275 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
PDE4C-203ENST00000447275 SHANK2Q9UPX8 1470 aa15.92■□□□□ 0.14
PDE4C-203ENST00000447275 ARHGEF5Q12774 1597 aa15.9■□□□□ 0.14
PDE4C-203ENST00000447275 TTC37Q6PGP7 1564 aa15.9■□□□□ 0.14
PDE4C-203ENST00000447275 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
PDE4C-203ENST00000447275 SAMD9LQ8IVG5 1584 aa15.89■□□□□ 0.13
PDE4C-203ENST00000447275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
PDE4C-203ENST00000447275 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
PDE4C-203ENST00000447275 MYT1LQ9UL68 1186 aa15.89■□□□□ 0.13
PDE4C-203ENST00000447275 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
PDE4C-203ENST00000447275 ANKRD30AQ9BXX3 1397 aa15.88■□□□□ 0.13
PDE4C-203ENST00000447275 C9orf84Q5VXU9 1444 aa15.88■□□□□ 0.13
PDE4C-203ENST00000447275 MBD5Q9P267 1494 aa15.87■□□□□ 0.13
PDE4C-203ENST00000447275 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
PDE4C-203ENST00000447275 PZPP20742 1482 aa15.86■□□□□ 0.13
PDE4C-203ENST00000447275 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
PDE4C-203ENST00000447275 ANKRD30BQ9BXX2 1392 aa15.85■□□□□ 0.13
PDE4C-203ENST00000447275 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
PDE4C-203ENST00000447275 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
PDE4C-203ENST00000447275 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
PDE4C-203ENST00000447275 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
PDE4C-203ENST00000447275 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
PDE4C-203ENST00000447275 RPRD2Q5VT52 1461 aaKnown RBP15.82■□□□□ 0.12
PDE4C-203ENST00000447275 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
PDE4C-203ENST00000447275 SYCP2Q9BX26 1530 aa15.81■□□□□ 0.12
PDE4C-203ENST00000447275 CCDC141Q6ZP82 1450 aa15.81■□□□□ 0.12
PDE4C-203ENST00000447275 DEKP35659 375 aaKnown RBP15.81■□□□□ 0.12
PDE4C-203ENST00000447275 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
PDE4C-203ENST00000447275 MAST1Q9Y2H9 1570 aa15.79■□□□□ 0.12
PDE4C-203ENST00000447275 KDM5DQ9BY66 1539 aa15.79■□□□□ 0.12
PDE4C-203ENST00000447275 CCDC184Q52MB2 194 aa15.78■□□□□ 0.12
PDE4C-203ENST00000447275 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
PDE4C-203ENST00000447275 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
PDE4C-203ENST00000447275 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
PDE4C-203ENST00000447275 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.12
PDE4C-203ENST00000447275 PKD2Q13563 968 aa15.76■□□□□ 0.11
PDE4C-203ENST00000447275 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
PDE4C-203ENST00000447275 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
PDE4C-203ENST00000447275 ARHGEF12Q9NZN5 1544 aa15.75■□□□□ 0.11
PDE4C-203ENST00000447275 NUP155O75694 1391 aa15.75■□□□□ 0.11
PDE4C-203ENST00000447275 PLCH2O75038 1416 aa15.75■□□□□ 0.11
PDE4C-203ENST00000447275 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
PDE4C-203ENST00000447275 PLXNC1O60486 1568 aa15.73■□□□□ 0.11
PDE4C-203ENST00000447275 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
PDE4C-203ENST00000447275 CNTLNQ9NXG0 1405 aa15.73■□□□□ 0.11
PDE4C-203ENST00000447275 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
PDE4C-203ENST00000447275 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
PDE4C-203ENST00000447275 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDE4C-203ENST00000447275 FAM9BQ8IZU0 186 aa15.71■□□□□ 0.11
PDE4C-203ENST00000447275 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms