RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 WIZO95785 1651 aa10.39□□□□□ -0.75
PTPN3-205ENST00000447271 RBM33Q96EV2 1170 aaKnown RBP10.38□□□□□ -0.75
PTPN3-205ENST00000447271 PREX1Q8TCU6 1659 aa10.38□□□□□ -0.75
PTPN3-205ENST00000447271 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
PTPN3-205ENST00000447271 PRKAR2AP13861 404 aaKnown RBP10.34□□□□□ -0.75
PTPN3-205ENST00000447271 EVX2Q03828 476 aa10.34□□□□□ -0.75
PTPN3-205ENST00000447271 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
PTPN3-205ENST00000447271 CHADLQ6NUI6 762 aa10.32□□□□□ -0.76
PTPN3-205ENST00000447271 SLC34A2O95436 690 aa10.31□□□□□ -0.76
PTPN3-205ENST00000447271 CUL7Q14999 1698 aa10.31□□□□□ -0.76
PTPN3-205ENST00000447271 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
PTPN3-205ENST00000447271 TOM1O60784 492 aa10.29□□□□□ -0.76
PTPN3-205ENST00000447271 SP7Q8TDD2 431 aaPredicted RBP10.29□□□□□ -0.76
PTPN3-205ENST00000447271 ZNF335Q9H4Z2 1342 aaPredicted RBP10.28□□□□□ -0.76
PTPN3-205ENST00000447271 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
PTPN3-205ENST00000447271 HAX1O00165 279 aa10.27□□□□□ -0.77
PTPN3-205ENST00000447271 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
PTPN3-205ENST00000447271 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
PTPN3-205ENST00000447271 PCDH10Q9P2E7 1040 aa10.24□□□□□ -0.77
PTPN3-205ENST00000447271 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
PTPN3-205ENST00000447271 ADAMTS12P58397 1594 aa10.22□□□□□ -0.77
PTPN3-205ENST00000447271 SETBP1Q9Y6X0 1596 aa10.22□□□□□ -0.77
PTPN3-205ENST00000447271 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
PTPN3-205ENST00000447271 YY1P25490 414 aa10.21□□□□□ -0.77
PTPN3-205ENST00000447271 UHRF1BP1Q6BDS2 1440 aa10.21□□□□□ -0.78
PTPN3-205ENST00000447271 FER1L4A9Z1Z3 1794 aa10.21□□□□□ -0.78
PTPN3-205ENST00000447271 TTBK1Q5TCY1 1321 aaPredicted RBP10.2□□□□□ -0.78
PTPN3-205ENST00000447271 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
PTPN3-205ENST00000447271 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
PTPN3-205ENST00000447271 ABCA5Q8WWZ7 1642 aa10.18□□□□□ -0.78
PTPN3-205ENST00000447271 SETD1BQ9UPS6 1966 aaKnown RBP10.18□□□□□ -0.78
PTPN3-205ENST00000447271 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
PTPN3-205ENST00000447271 CD109Q6YHK3 1445 aa10.17□□□□□ -0.78
PTPN3-205ENST00000447271 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
PTPN3-205ENST00000447271 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
PTPN3-205ENST00000447271 TRIM52Q96A61 297 aa10.16□□□□□ -0.78
PTPN3-205ENST00000447271 CEBPAP49715 358 aaPredicted RBP10.14□□□□□ -0.79
PTPN3-205ENST00000447271 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
PTPN3-205ENST00000447271 PROM2Q8N271 834 aa10.13□□□□□ -0.79
PTPN3-205ENST00000447271 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
PTPN3-205ENST00000447271 PTPRGP23470 1445 aa10.13□□□□□ -0.79
PTPN3-205ENST00000447271 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
PTPN3-205ENST00000447271 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
PTPN3-205ENST00000447271 FHAD1B1AJZ9 1412 aa10.11□□□□□ -0.79
PTPN3-205ENST00000447271 RAPGEF3O95398 923 aa10.11□□□□□ -0.79
PTPN3-205ENST00000447271 MLECQ14165 292 aa10.11□□□□□ -0.79
PTPN3-205ENST00000447271 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
PTPN3-205ENST00000447271 TOP2AP11388 1531 aaKnown RBP10.08□□□□□ -0.8
PTPN3-205ENST00000447271 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
PTPN3-205ENST00000447271 FANCAO15360 1455 aa10.07□□□□□ -0.8
PTPN3-205ENST00000447271 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
PTPN3-205ENST00000447271 ZCCHC11Q5TAX3 1644 aaKnown RBP10.06□□□□□ -0.8
PTPN3-205ENST00000447271 LRP5O75197 1615 aa10.05□□□□□ -0.8
PTPN3-205ENST00000447271 ARHGEF40Q8TER5 1519 aa10.05□□□□□ -0.8
PTPN3-205ENST00000447271 WDR7Q9Y4E6 1490 aa10.04□□□□□ -0.8
PTPN3-205ENST00000447271 SIGLEC1Q9BZZ2 1709 aa10.04□□□□□ -0.8
PTPN3-205ENST00000447271 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
PTPN3-205ENST00000447271 UHRF1BP1LA0JNW5 1464 aa10.04□□□□□ -0.8
PTPN3-205ENST00000447271 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
PTPN3-205ENST00000447271 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
PTPN3-205ENST00000447271 CUX1P39880 1505 aa10.02□□□□□ -0.8
PTPN3-205ENST00000447271 KDM5BQ9UGL1 1544 aa10.02□□□□□ -0.8
PTPN3-205ENST00000447271 KCNH8Q96L42 1107 aa10.02□□□□□ -0.81
PTPN3-205ENST00000447271 CAMSAP1Q5T5Y3 1602 aa10.02□□□□□ -0.81
PTPN3-205ENST00000447271 RAPGEF6Q8TEU7 1601 aa10.01□□□□□ -0.81
PTPN3-205ENST00000447271 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
PTPN3-205ENST00000447271 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
PTPN3-205ENST00000447271 FRMPD1Q5SYB0 1578 aa10.01□□□□□ -0.81
PTPN3-205ENST00000447271 CCDC88BA6NC98 1476 aa10□□□□□ -0.81
PTPN3-205ENST00000447271 GABBR2O75899 941 aa10□□□□□ -0.81
PTPN3-205ENST00000447271 CEP350Q5VT06 3117 aa9.99□□□□□ -0.81
PTPN3-205ENST00000447271 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
PTPN3-205ENST00000447271 CPS1P31327 1500 aa9.98□□□□□ -0.81
PTPN3-205ENST00000447271 LRRC7Q96NW7 1537 aa9.98□□□□□ -0.81
PTPN3-205ENST00000447271 C1QTNF8P60827 252 aa9.97□□□□□ -0.81
PTPN3-205ENST00000447271 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
PTPN3-205ENST00000447271 PHLDB1Q86UU1 1377 aa9.95□□□□□ -0.82
PTPN3-205ENST00000447271 ARHGEF12Q9NZN5 1544 aa9.94□□□□□ -0.82
PTPN3-205ENST00000447271 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
PTPN3-205ENST00000447271 RXRBP28702 533 aa9.94□□□□□ -0.82
PTPN3-205ENST00000447271 FKBP8Q14318 412 aa9.92□□□□□ -0.82
PTPN3-205ENST00000447271 ZNF772Q68DY9 489 aaPredicted RBP9.92□□□□□ -0.82
PTPN3-205ENST00000447271 PKD2Q13563 968 aa9.91□□□□□ -0.82
PTPN3-205ENST00000447271 CDK12Q9NYV4 1490 aaPredicted RBP9.91□□□□□ -0.82
PTPN3-205ENST00000447271 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
PTPN3-205ENST00000447271 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
PTPN3-205ENST00000447271 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
PTPN3-205ENST00000447271 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.82
PTPN3-205ENST00000447271 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
PTPN3-205ENST00000447271 SUPT6HQ7KZ85 1726 aaKnown RBP9.89□□□□□ -0.83
PTPN3-205ENST00000447271 C3P01024 1663 aa9.89□□□□□ -0.83
PTPN3-205ENST00000447271 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
PTPN3-205ENST00000447271 SHANK2Q9UPX8 1470 aa9.88□□□□□ -0.83
PTPN3-205ENST00000447271 ZNF579Q8NAF0 562 aaKnown RBP9.88□□□□□ -0.83
PTPN3-205ENST00000447271 CARMIL2Q6F5E8 1435 aa9.87□□□□□ -0.83
PTPN3-205ENST00000447271 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
PTPN3-205ENST00000447271 TRAPPC8Q9Y2L5 1435 aa9.86□□□□□ -0.83
PTPN3-205ENST00000447271 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
PTPN3-205ENST00000447271 ZFYVE16Q7Z3T8 1539 aa9.84□□□□□ -0.83
PTPN3-205ENST00000447271 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms