RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
SDCBP-205ENST00000447267 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
SDCBP-205ENST00000447267 DISP3Q9P2K9 1392 aa10.65□□□□□ -0.71
SDCBP-205ENST00000447267 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.71
SDCBP-205ENST00000447267 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
SDCBP-205ENST00000447267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-205ENST00000447267 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
SDCBP-205ENST00000447267 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-205ENST00000447267 ZNF608Q9ULD9 1512 aaPredicted RBP10.62□□□□□ -0.71
SDCBP-205ENST00000447267 RSF1Q96T23 1441 aaPredicted RBP10.61□□□□□ -0.71
SDCBP-205ENST00000447267 SLAIN1Q8ND83 568 aa10.6□□□□□ -0.71
SDCBP-205ENST00000447267 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
SDCBP-205ENST00000447267 FAM163AQ96GL9 167 aaPredicted RBP10.58□□□□□ -0.72
SDCBP-205ENST00000447267 RGL2O15211 777 aa10.57□□□□□ -0.72
SDCBP-205ENST00000447267 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
SDCBP-205ENST00000447267 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
SDCBP-205ENST00000447267 POTEMA6NI47 508 aa10.56□□□□□ -0.72
SDCBP-205ENST00000447267 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-205ENST00000447267 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
SDCBP-205ENST00000447267 HECW2Q9P2P5 1572 aa10.55□□□□□ -0.72
SDCBP-205ENST00000447267 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
SDCBP-205ENST00000447267 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
SDCBP-205ENST00000447267 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
SDCBP-205ENST00000447267 URB2Q14146 1524 aaKnown RBP10.53□□□□□ -0.72
SDCBP-205ENST00000447267 SYNJ2O15056 1496 aa10.52□□□□□ -0.73
SDCBP-205ENST00000447267 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
SDCBP-205ENST00000447267 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
SDCBP-205ENST00000447267 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
SDCBP-205ENST00000447267 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
SDCBP-205ENST00000447267 ST18O60284 1047 aa10.48□□□□□ -0.73
SDCBP-205ENST00000447267 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
SDCBP-205ENST00000447267 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
SDCBP-205ENST00000447267 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
SDCBP-205ENST00000447267 SOX12O15370 315 aa10.45□□□□□ -0.74
SDCBP-205ENST00000447267 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
SDCBP-205ENST00000447267 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
SDCBP-205ENST00000447267 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.74
SDCBP-205ENST00000447267 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
SDCBP-205ENST00000447267 MFRPQ9BY79 579 aa10.43□□□□□ -0.74
SDCBP-205ENST00000447267 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 CHD1O14646 1710 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 STK25O00506 426 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 FAM69CQ0P6D2 419 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
SDCBP-205ENST00000447267 ADGRL1O94910 1474 aa10.4□□□□□ -0.74
SDCBP-205ENST00000447267 HOXB3P14651 431 aaPredicted RBP10.37□□□□□ -0.75
SDCBP-205ENST00000447267 NLRP6P59044 892 aa10.35□□□□□ -0.75
SDCBP-205ENST00000447267 TAOK2Q9UL54 1235 aa10.35□□□□□ -0.75
SDCBP-205ENST00000447267 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-205ENST00000447267 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
SDCBP-205ENST00000447267 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
SDCBP-205ENST00000447267 G3V3G9 751 aa10.33□□□□□ -0.76
SDCBP-205ENST00000447267 EIF4G3O43432 1585 aaKnown RBP10.33□□□□□ -0.76
SDCBP-205ENST00000447267 SNPHO15079 494 aa10.32□□□□□ -0.76
SDCBP-205ENST00000447267 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
SDCBP-205ENST00000447267 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
SDCBP-205ENST00000447267 PPP1R37O75864 691 aa10.3□□□□□ -0.76
SDCBP-205ENST00000447267 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
SDCBP-205ENST00000447267 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
SDCBP-205ENST00000447267 CDAN1Q8IWY9 1227 aa10.28□□□□□ -0.76
SDCBP-205ENST00000447267 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
SDCBP-205ENST00000447267 KDM6BO15054 1643 aa10.28□□□□□ -0.76
SDCBP-205ENST00000447267 CFTRP13569 1480 aa10.28□□□□□ -0.76
SDCBP-205ENST00000447267 KIF13AQ9H1H9 1805 aa10.28□□□□□ -0.76
SDCBP-205ENST00000447267 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
SDCBP-205ENST00000447267 PCDH10Q9P2E7 1040 aa10.26□□□□□ -0.77
SDCBP-205ENST00000447267 MROH2BQ7Z745 1585 aa10.26□□□□□ -0.77
SDCBP-205ENST00000447267 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-205ENST00000447267 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
SDCBP-205ENST00000447267 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
SDCBP-205ENST00000447267 KIF3CO14782 793 aa10.22□□□□□ -0.77
SDCBP-205ENST00000447267 ABCC10Q5T3U5 1492 aa10.22□□□□□ -0.77
SDCBP-205ENST00000447267 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
SDCBP-205ENST00000447267 SYNJ1O43426 1573 aa10.2□□□□□ -0.78
SDCBP-205ENST00000447267 EMP3P54852 163 aa10.2□□□□□ -0.78
SDCBP-205ENST00000447267 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
SDCBP-205ENST00000447267 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
SDCBP-205ENST00000447267 C2orf72A6NCS6 295 aa10.19□□□□□ -0.78
SDCBP-205ENST00000447267 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-205ENST00000447267 DOK7Q18PE1 504 aa10.18□□□□□ -0.78
SDCBP-205ENST00000447267 FAM205CA6NFA0 338 aa10.17□□□□□ -0.78
SDCBP-205ENST00000447267 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
SDCBP-205ENST00000447267 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
SDCBP-205ENST00000447267 ZNF710Q8N1W2 664 aa10.14□□□□□ -0.79
SDCBP-205ENST00000447267 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
SDCBP-205ENST00000447267 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
SDCBP-205ENST00000447267 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.795e-6■■■■□ 22.3
SDCBP-205ENST00000447267 RAD54L2Q9Y4B4 1467 aa10.12□□□□□ -0.79
SDCBP-205ENST00000447267 TARBP1Q13395 1621 aaKnown RBP10.11□□□□□ -0.79
SDCBP-205ENST00000447267 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
SDCBP-205ENST00000447267 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
SDCBP-205ENST00000447267 COL17A1Q9UMD9 1497 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-205ENST00000447267 DIP2BQ9P265 1576 aa10.08□□□□□ -0.8
SDCBP-205ENST00000447267 TSPOAP1O95153 1857 aa10.07□□□□□ -0.8
SDCBP-205ENST00000447267 HSPA2P54652 639 aa10.07□□□□□ -0.8
SDCBP-205ENST00000447267 GTPBP6O43824 516 aaPredicted RBP10.06□□□□□ -0.8
SDCBP-205ENST00000447267 ERBB3P21860 1342 aa10.06□□□□□ -0.8
SDCBP-205ENST00000447267 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
SDCBP-205ENST00000447267 VARS2Q5ST30 1063 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms