RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 RAB3GAP2Q9H2M9 1393 aa9.08□□□□□ -0.96
CDK12-202ENST00000447079 TRHP20396 242 aaPredicted RBP9.08□□□□□ -0.96
CDK12-202ENST00000447079 HDGFL2Q7Z4V5 671 aaPredicted RBP9.07□□□□□ -0.96
CDK12-202ENST00000447079 A0A0G2JS52 829 aa9.07□□□□□ -0.96
CDK12-202ENST00000447079 CUL7Q14999 1698 aa9.07□□□□□ -0.96
CDK12-202ENST00000447079 ARXQ96QS3 562 aa9.07□□□□□ -0.96
CDK12-202ENST00000447079 HIRIP3Q9BW71 556 aaPredicted RBP9.06□□□□□ -0.96
CDK12-202ENST00000447079 SPAG9O60271 1321 aaKnown RBP9.06□□□□□ -0.96
CDK12-202ENST00000447079 PKD2Q13563 968 aa9.06□□□□□ -0.96
CDK12-202ENST00000447079 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
CDK12-202ENST00000447079 NOP58Q9Y2X3 529 aaKnown RBP9.06□□□□□ -0.96
CDK12-202ENST00000447079 NAP1L5Q96NT1 182 aaPredicted RBP9.05□□□□□ -0.96
CDK12-202ENST00000447079 SUPT6HQ7KZ85 1726 aaKnown RBP9.05□□□□□ -0.96
CDK12-202ENST00000447079 RALBP1Q15311 655 aa9.05□□□□□ -0.96
CDK12-202ENST00000447079 JPH4Q96JJ6 628 aa9.05□□□□□ -0.96
CDK12-202ENST00000447079 HECW1Q76N89 1606 aa9.05□□□□□ -0.96
CDK12-202ENST00000447079 MPHOSPH9Q99550 1183 aa9.05□□□□□ -0.96
CDK12-202ENST00000447079 GRIN2BQ13224 1484 aa9.04□□□□□ -0.96
CDK12-202ENST00000447079 CDK11BP21127 795 aaKnown RBP9.04□□□□□ -0.96
CDK12-202ENST00000447079 PHLDB1Q86UU1 1377 aa9.04□□□□□ -0.96
CDK12-202ENST00000447079 PTPRGP23470 1445 aa9.04□□□□□ -0.96
CDK12-202ENST00000447079 LAMC3Q9Y6N6 1575 aa9.04□□□□□ -0.96
CDK12-202ENST00000447079 DEKP35659 375 aaKnown RBP9.03□□□□□ -0.96
CDK12-202ENST00000447079 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 MORC1Q86VD1 984 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 SIN3AQ96ST3 1273 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 MRC2Q9UBG0 1479 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CDK12-202ENST00000447079 EID1Q9Y6B2 187 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 FYCO1Q9BQS8 1478 aa9.03□□□□□ -0.96
CDK12-202ENST00000447079 GGT6Q6P531 493 aa9.02□□□□□ -0.97
CDK12-202ENST00000447079 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
CDK12-202ENST00000447079 CFTRP13569 1480 aa9.02□□□□□ -0.97
CDK12-202ENST00000447079 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
CDK12-202ENST00000447079 SUPT16HQ9Y5B9 1047 aaKnown RBP9.01□□□□□ -0.97
CDK12-202ENST00000447079 MYOM3Q5VTT5 1437 aa9.01□□□□□ -0.97
CDK12-202ENST00000447079 U2SURPO15042 1029 aaKnown RBP9.01□□□□□ -0.97
CDK12-202ENST00000447079 CC2D1BQ5T0F9 858 aaKnown RBP9.01□□□□□ -0.97
CDK12-202ENST00000447079 TERF2IPQ9NYB0 399 aa9.01□□□□□ -0.97
CDK12-202ENST00000447079 RTF1Q92541 710 aaKnown RBP9.01□□□□□ -0.97
CDK12-202ENST00000447079 IFT140Q96RY7 1462 aa9□□□□□ -0.97
CDK12-202ENST00000447079 LMOD2Q6P5Q4 547 aa9□□□□□ -0.97
CDK12-202ENST00000447079 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
CDK12-202ENST00000447079 ZRSR1Q15695 479 aaKnown RBP9□□□□□ -0.97
CDK12-202ENST00000447079 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
CDK12-202ENST00000447079 LAS1LQ9Y4W2 734 aaKnown RBP9□□□□□ -0.97
CDK12-202ENST00000447079 EHBP1L1Q8N3D4 1523 aa8.99□□□□□ -0.97
CDK12-202ENST00000447079 WASHC2CQ9Y4E1 1318 aa8.99□□□□□ -0.97
CDK12-202ENST00000447079 MLECQ14165 292 aa8.99□□□□□ -0.97
CDK12-202ENST00000447079 HDAC5Q9UQL6 1122 aa8.99□□□□□ -0.97
CDK12-202ENST00000447079 NPHP1O15259 732 aa8.98□□□□□ -0.97
CDK12-202ENST00000447079 IRX6P78412 446 aaPredicted RBP8.98□□□□□ -0.97
CDK12-202ENST00000447079 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
CDK12-202ENST00000447079 STAC3Q96MF2 364 aa8.98□□□□□ -0.97
CDK12-202ENST00000447079 CASKIN1Q8WXD9 1431 aa8.98□□□□□ -0.97
CDK12-202ENST00000447079 KIF3BO15066 747 aa8.98□□□□□ -0.97
CDK12-202ENST00000447079 SYNJ2O15056 1496 aa8.97□□□□□ -0.97
CDK12-202ENST00000447079 OSCARQ8IYS5 282 aa8.97□□□□□ -0.97
CDK12-202ENST00000447079 OS9Q13438 667 aaPredicted RBP8.97□□□□□ -0.97
CDK12-202ENST00000447079 HSPA5P11021 654 aaKnown RBP8.97□□□□□ -0.97
CDK12-202ENST00000447079 SENP3Q9H4L4 574 aaPredicted RBP8.97□□□□□ -0.97
CDK12-202ENST00000447079 MCCP23508 829 aa8.96□□□□□ -0.97
CDK12-202ENST00000447079 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.97
CDK12-202ENST00000447079 GOLGA2Q08379 1002 aa8.96□□□□□ -0.98
CDK12-202ENST00000447079 LMOD3Q0VAK6 560 aa8.96□□□□□ -0.98
CDK12-202ENST00000447079 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDK12-202ENST00000447079 KIF15Q9NS87 1388 aa8.95□□□□□ -0.98
CDK12-202ENST00000447079 NEUROD2Q15784 382 aa8.95□□□□□ -0.98
CDK12-202ENST00000447079 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
CDK12-202ENST00000447079 L1TD1Q5T7N2 865 aaKnown RBP8.95□□□□□ -0.98
CDK12-202ENST00000447079 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
CDK12-202ENST00000447079 LRRC9Q6ZRR7 1453 aa8.94□□□□□ -0.98
CDK12-202ENST00000447079 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
CDK12-202ENST00000447079 IGF1RP08069 1367 aa8.94□□□□□ -0.98
CDK12-202ENST00000447079 FRAT1Q92837 279 aaPredicted RBP8.94□□□□□ -0.98
CDK12-202ENST00000447079 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
CDK12-202ENST00000447079 TOPBP1Q92547 1522 aa8.94□□□□□ -0.98
CDK12-202ENST00000447079 DNTTIP2Q5QJE6 756 aaKnown RBP8.93□□□□□ -0.98
CDK12-202ENST00000447079 PTMAP06454 111 aaKnown RBP8.93□□□□□ -0.98
CDK12-202ENST00000447079 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
CDK12-202ENST00000447079 VGFO15240 615 aaPredicted RBP8.93□□□□□ -0.98
CDK12-202ENST00000447079 PEG3Q9GZU2 1588 aa8.92□□□□□ -0.98
CDK12-202ENST00000447079 STK26Q9P289 416 aa8.92□□□□□ -0.98
CDK12-202ENST00000447079 RUSC2Q8N2Y8 1516 aa8.92□□□□□ -0.98
CDK12-202ENST00000447079 GOLGA6L6A8MZA4 724 aa8.92□□□□□ -0.98
CDK12-202ENST00000447079 PTMSP20962 102 aa8.92□□□□□ -0.98
CDK12-202ENST00000447079 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
CDK12-202ENST00000447079 KCNJ4P48050 445 aa8.91□□□□□ -0.98
CDK12-202ENST00000447079 RRBP1Q9P2E9 1410 aaKnown RBP8.91□□□□□ -0.98
CDK12-202ENST00000447079 BIVM-ERCC5R4GMW8 1640 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 IQGAP2Q13576 1575 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 FGD1P98174 961 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 NLRP13Q86W25 1043 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 EVC2Q86UK5 1308 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
CDK12-202ENST00000447079 HSP90AB1P08238 724 aaKnown RBP8.9□□□□□ -0.99
CDK12-202ENST00000447079 NGEFQ8N5V2 710 aa8.89□□□□□ -0.99
CDK12-202ENST00000447079 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDK12-202ENST00000447079 GPATCH3Q96I76 525 aa8.89□□□□□ -0.99
CDK12-202ENST00000447079 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms