RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
LINC01949-201ENST00000445770 ADRA2BP18089 450 aa13.98□□□□□ -0.17
LINC01949-201ENST00000445770 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
LINC01949-201ENST00000445770 L3MBTL2Q969R5 705 aa13.97□□□□□ -0.17
LINC01949-201ENST00000445770 ZNF326Q5BKZ1 582 aaKnown RBP13.97□□□□□ -0.17
LINC01949-201ENST00000445770 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
LINC01949-201ENST00000445770 ABCC5O15440 1437 aa13.97□□□□□ -0.17
LINC01949-201ENST00000445770 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
LINC01949-201ENST00000445770 KIF14Q15058 1648 aa13.96□□□□□ -0.18
LINC01949-201ENST00000445770 DAPK1P53355 1430 aa13.96□□□□□ -0.18
LINC01949-201ENST00000445770 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
LINC01949-201ENST00000445770 CDK11AQ9UQ88 783 aaPredicted RBP13.95□□□□□ -0.18
LINC01949-201ENST00000445770 BCANQ96GW7 911 aa13.94□□□□□ -0.18
LINC01949-201ENST00000445770 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
LINC01949-201ENST00000445770 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
LINC01949-201ENST00000445770 KDM5BQ9UGL1 1544 aa13.93□□□□□ -0.18
LINC01949-201ENST00000445770 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
LINC01949-201ENST00000445770 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
LINC01949-201ENST00000445770 C11orf95C9JLR9 678 aaPredicted RBP13.91□□□□□ -0.18
LINC01949-201ENST00000445770 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC01949-201ENST00000445770 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
LINC01949-201ENST00000445770 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
LINC01949-201ENST00000445770 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
LINC01949-201ENST00000445770 ANP32CO43423 234 aa13.89□□□□□ -0.19
LINC01949-201ENST00000445770 CAMSAP2Q08AD1 1489 aa13.89□□□□□ -0.19
LINC01949-201ENST00000445770 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
LINC01949-201ENST00000445770 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
LINC01949-201ENST00000445770 WASHC2AQ641Q2 1341 aa13.89□□□□□ -0.19
LINC01949-201ENST00000445770 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
LINC01949-201ENST00000445770 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
LINC01949-201ENST00000445770 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
LINC01949-201ENST00000445770 NUP160Q12769 1436 aa13.87□□□□□ -0.19
LINC01949-201ENST00000445770 GCC2Q8IWJ2 1684 aa13.87□□□□□ -0.19
LINC01949-201ENST00000445770 PKD2Q13563 968 aa13.85□□□□□ -0.19
LINC01949-201ENST00000445770 ATP10BO94823 1461 aa13.85□□□□□ -0.19
LINC01949-201ENST00000445770 CCDC184Q52MB2 194 aa13.84□□□□□ -0.19
LINC01949-201ENST00000445770 DNMT1P26358 1616 aaKnown RBP13.84□□□□□ -0.19
LINC01949-201ENST00000445770 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
LINC01949-201ENST00000445770 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
LINC01949-201ENST00000445770 EIF4G2P78344 907 aaKnown RBP eCLIP13.82□□□□□ -0.2
LINC01949-201ENST00000445770 PTPRGP23470 1445 aa13.82□□□□□ -0.2
LINC01949-201ENST00000445770 NCOA1Q15788 1441 aa13.82□□□□□ -0.2
LINC01949-201ENST00000445770 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
LINC01949-201ENST00000445770 ERCC6L2Q5T890 1561 aa13.81□□□□□ -0.2
LINC01949-201ENST00000445770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC01949-201ENST00000445770 PZPP20742 1482 aa13.79□□□□□ -0.2
LINC01949-201ENST00000445770 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
LINC01949-201ENST00000445770 NUP155O75694 1391 aa13.78□□□□□ -0.2
LINC01949-201ENST00000445770 FKBP8Q14318 412 aa13.78□□□□□ -0.2
LINC01949-201ENST00000445770 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
LINC01949-201ENST00000445770 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
LINC01949-201ENST00000445770 TSPY4P0CV99 314 aa13.76□□□□□ -0.21
LINC01949-201ENST00000445770 TSPY10P0CW01 314 aa13.76□□□□□ -0.21
LINC01949-201ENST00000445770 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01949-201ENST00000445770 RPRD2Q5VT52 1461 aaKnown RBP13.76□□□□□ -0.21
LINC01949-201ENST00000445770 ABCA8O94911 1581 aa13.75□□□□□ -0.21
LINC01949-201ENST00000445770 TEX14Q8IWB6 1497 aa13.75□□□□□ -0.21
LINC01949-201ENST00000445770 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
LINC01949-201ENST00000445770 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
LINC01949-201ENST00000445770 CHD1O14646 1710 aa13.74□□□□□ -0.21
LINC01949-201ENST00000445770 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
LINC01949-201ENST00000445770 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
LINC01949-201ENST00000445770 CDC42BPAQ5VT25 1732 aa13.74□□□□□ -0.21
LINC01949-201ENST00000445770 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
LINC01949-201ENST00000445770 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
LINC01949-201ENST00000445770 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
LINC01949-201ENST00000445770 ITSN2Q9NZM3 1697 aa13.7□□□□□ -0.22
LINC01949-201ENST00000445770 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
LINC01949-201ENST00000445770 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
LINC01949-201ENST00000445770 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
LINC01949-201ENST00000445770 KIAA1107Q9UPP5 1409 aa13.69□□□□□ -0.22
LINC01949-201ENST00000445770 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
LINC01949-201ENST00000445770 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
LINC01949-201ENST00000445770 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
LINC01949-201ENST00000445770 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
LINC01949-201ENST00000445770 CROCC2H7BZ55 1655 aa13.66□□□□□ -0.22
LINC01949-201ENST00000445770 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
LINC01949-201ENST00000445770 USP47Q96K76 1375 aa13.65□□□□□ -0.22
LINC01949-201ENST00000445770 ARHGAP5Q13017 1502 aa13.65□□□□□ -0.22
LINC01949-201ENST00000445770 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
LINC01949-201ENST00000445770 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
LINC01949-201ENST00000445770 SAMD9LQ8IVG5 1584 aa13.65□□□□□ -0.22
LINC01949-201ENST00000445770 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
LINC01949-201ENST00000445770 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
LINC01949-201ENST00000445770 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
LINC01949-201ENST00000445770 CDC42BPBQ9Y5S2 1711 aa13.62□□□□□ -0.23
LINC01949-201ENST00000445770 ST20-MTHFSA0A0A6YYL1 179 aa13.62□□□□□ -0.23
LINC01949-201ENST00000445770 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
LINC01949-201ENST00000445770 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
LINC01949-201ENST00000445770 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
LINC01949-201ENST00000445770 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
LINC01949-201ENST00000445770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01949-201ENST00000445770 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
LINC01949-201ENST00000445770 CCDC141Q6ZP82 1450 aa13.59□□□□□ -0.23
LINC01949-201ENST00000445770 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
LINC01949-201ENST00000445770 ARHGEF12Q9NZN5 1544 aa13.59□□□□□ -0.23
LINC01949-201ENST00000445770 BCORL1Q5H9F3 1711 aa13.58□□□□□ -0.23
LINC01949-201ENST00000445770 NEFLP07196 543 aa13.58□□□□□ -0.24
LINC01949-201ENST00000445770 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
LINC01949-201ENST00000445770 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms