RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
CASP4-203ENST00000444739 SPATA31E1Q6ZUB1 1445 aa13.58□□□□□ -0.24
CASP4-203ENST00000444739 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
CASP4-203ENST00000444739 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
CASP4-203ENST00000444739 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
CASP4-203ENST00000444739 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
CASP4-203ENST00000444739 GRIN2BQ13224 1484 aa13.57□□□□□ -0.24
CASP4-203ENST00000444739 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
CASP4-203ENST00000444739 SAMD9Q5K651 1589 aa13.56□□□□□ -0.24
CASP4-203ENST00000444739 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
CASP4-203ENST00000444739 RRP7BPQ9NSQ0 103 aa13.55□□□□□ -0.24
CASP4-203ENST00000444739 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
CASP4-203ENST00000444739 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
CASP4-203ENST00000444739 TEX14Q8IWB6 1497 aa13.54□□□□□ -0.24
CASP4-203ENST00000444739 NBPF8Q3BBV2 869 aa13.54□□□□□ -0.24
CASP4-203ENST00000444739 MPHOSPH9Q99550 1183 aa13.53□□□□□ -0.24
CASP4-203ENST00000444739 DHX29Q7Z478 1369 aaKnown RBP13.53□□□□□ -0.24
CASP4-203ENST00000444739 RPRD2Q5VT52 1461 aaKnown RBP13.52□□□□□ -0.24
CASP4-203ENST00000444739 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
CASP4-203ENST00000444739 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
CASP4-203ENST00000444739 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
CASP4-203ENST00000444739 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
CASP4-203ENST00000444739 USP35Q9P2H5 1018 aa13.49□□□□□ -0.25
CASP4-203ENST00000444739 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
CASP4-203ENST00000444739 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
CASP4-203ENST00000444739 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
CASP4-203ENST00000444739 WASHC2CQ9Y4E1 1318 aa13.48□□□□□ -0.25
CASP4-203ENST00000444739 BCORL1Q5H9F3 1711 aa13.48□□□□□ -0.25
CASP4-203ENST00000444739 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
CASP4-203ENST00000444739 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
CASP4-203ENST00000444739 TCERG1O14776 1098 aaKnown RBP13.45□□□□□ -0.26
CASP4-203ENST00000444739 NEFMP07197 916 aa13.45□□□□□ -0.26
CASP4-203ENST00000444739 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CASP4-203ENST00000444739 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
CASP4-203ENST00000444739 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
CASP4-203ENST00000444739 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
CASP4-203ENST00000444739 FANCD2Q9BXW9 1451 aa13.44□□□□□ -0.26
CASP4-203ENST00000444739 PDE4AP27815 886 aa13.43□□□□□ -0.26
CASP4-203ENST00000444739 BACH2Q9BYV9 841 aa13.42□□□□□ -0.26
CASP4-203ENST00000444739 TOPBP1Q92547 1522 aa13.42□□□□□ -0.26
CASP4-203ENST00000444739 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
CASP4-203ENST00000444739 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
CASP4-203ENST00000444739 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
CASP4-203ENST00000444739 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
CASP4-203ENST00000444739 MS4A1P11836 297 aa13.41□□□□□ -0.26
CASP4-203ENST00000444739 EXOC6Q8TAG9 804 aa13.4□□□□□ -0.26
CASP4-203ENST00000444739 KDM5CP41229 1560 aa13.4□□□□□ -0.26
CASP4-203ENST00000444739 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
CASP4-203ENST00000444739 ROCK1Q13464 1354 aa13.39□□□□□ -0.27
CASP4-203ENST00000444739 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
CASP4-203ENST00000444739 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
CASP4-203ENST00000444739 USP47Q96K76 1375 aa13.38□□□□□ -0.27
CASP4-203ENST00000444739 KIF14Q15058 1648 aa13.38□□□□□ -0.27
CASP4-203ENST00000444739 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
CASP4-203ENST00000444739 NESP48681 1621 aa13.37□□□□□ -0.27
CASP4-203ENST00000444739 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
CASP4-203ENST00000444739 DNMT1P26358 1616 aaKnown RBP13.36□□□□□ -0.27
CASP4-203ENST00000444739 DAPK1P53355 1430 aa13.36□□□□□ -0.27
CASP4-203ENST00000444739 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
CASP4-203ENST00000444739 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
CASP4-203ENST00000444739 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
CASP4-203ENST00000444739 BRD4O60885 1362 aaPredicted RBP13.34□□□□□ -0.27
CASP4-203ENST00000444739 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
CASP4-203ENST00000444739 PZPP20742 1482 aa13.34□□□□□ -0.27
CASP4-203ENST00000444739 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
CASP4-203ENST00000444739 BRPF3Q9ULD4 1205 aa13.34□□□□□ -0.27
CASP4-203ENST00000444739 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
CASP4-203ENST00000444739 KIF15Q9NS87 1388 aa13.33□□□□□ -0.28
CASP4-203ENST00000444739 CDK13Q14004 1512 aaKnown RBP13.33□□□□□ -0.28
CASP4-203ENST00000444739 GSE1Q14687 1217 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 E9PCH4 1651 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 ABCC5O15440 1437 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
CASP4-203ENST00000444739 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
CASP4-203ENST00000444739 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
CASP4-203ENST00000444739 WDR62O43379 1518 aa13.29□□□□□ -0.28
CASP4-203ENST00000444739 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
CASP4-203ENST00000444739 RALGAPBQ86X10 1494 aa13.29□□□□□ -0.28
CASP4-203ENST00000444739 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
CASP4-203ENST00000444739 RALBP1Q15311 655 aa13.28□□□□□ -0.28
CASP4-203ENST00000444739 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
CASP4-203ENST00000444739 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
CASP4-203ENST00000444739 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.29
CASP4-203ENST00000444739 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
CASP4-203ENST00000444739 ADRA2BP18089 450 aa13.26□□□□□ -0.29
CASP4-203ENST00000444739 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
CASP4-203ENST00000444739 ZNF326Q5BKZ1 582 aaKnown RBP13.25□□□□□ -0.29
CASP4-203ENST00000444739 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
CASP4-203ENST00000444739 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
CASP4-203ENST00000444739 SKAP1Q86WV1 359 aa13.24□□□□□ -0.29
CASP4-203ENST00000444739 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
CASP4-203ENST00000444739 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
CASP4-203ENST00000444739 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
CASP4-203ENST00000444739 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
CASP4-203ENST00000444739 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
CASP4-203ENST00000444739 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
CASP4-203ENST00000444739 PLIN1O60240 522 aa13.21□□□□□ -0.29
CASP4-203ENST00000444739 NLRP13Q86W25 1043 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms