RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 MLECQ14165 292 aa34.73■■■■□ 3.15
POLR2J3-202ENST00000443430 FER1L4A9Z1Z3 1794 aa34.69■■■■□ 3.14
POLR2J3-202ENST00000443430 ATP10AO60312 1499 aa34.63■■■■□ 3.13
POLR2J3-202ENST00000443430 EFCAB2Q5VUJ9 269 aa34.61■■■■□ 3.13
POLR2J3-202ENST00000443430 ARHGEF12Q9NZN5 1544 aa34.6■■■■□ 3.13
POLR2J3-202ENST00000443430 MYO5CQ9NQX4 1742 aa34.59■■■■□ 3.13
POLR2J3-202ENST00000443430 C9orf84Q5VXU9 1444 aa34.59■■■■□ 3.13
POLR2J3-202ENST00000443430 ATP1B4Q9UN42 357 aaPredicted RBP34.59■■■■□ 3.13
POLR2J3-202ENST00000443430 CERKQ8TCT0 537 aa34.58■■■■□ 3.13
POLR2J3-202ENST00000443430 FMN1Q68DA7 1419 aa34.57■■■■□ 3.13
POLR2J3-202ENST00000443430 CDK11AQ9UQ88 783 aaPredicted RBP34.54■■■■□ 3.12
POLR2J3-202ENST00000443430 UBTFP17480 764 aaKnown RBP34.53■■■■□ 3.12
POLR2J3-202ENST00000443430 KIF14Q15058 1648 aa34.52■■■■□ 3.12
POLR2J3-202ENST00000443430 EHMT2Q96KQ7 1210 aa34.52■■■■□ 3.12
POLR2J3-202ENST00000443430 ARHGAP35Q9NRY4 1499 aa34.52■■■■□ 3.12
POLR2J3-202ENST00000443430 CEBPAP49715 358 aaPredicted RBP34.51■■■■□ 3.12
POLR2J3-202ENST00000443430 PREX1Q8TCU6 1659 aa34.49■■■■□ 3.11
POLR2J3-202ENST00000443430 ZNF518AQ6AHZ1 1483 aa34.47■■■■□ 3.11
POLR2J3-202ENST00000443430 AFAP1Q8N556 730 aa34.47■■■■□ 3.11
POLR2J3-202ENST00000443430 TROQ12816 1431 aaPredicted RBP34.46■■■■□ 3.11
POLR2J3-202ENST00000443430 KDM5CP41229 1560 aa34.45■■■■□ 3.1
POLR2J3-202ENST00000443430 ARHGAP5Q13017 1502 aa34.44■■■■□ 3.1
POLR2J3-202ENST00000443430 SETD1BQ9UPS6 1966 aaKnown RBP34.4■■■■□ 3.1
POLR2J3-202ENST00000443430 LRRIQ1Q96JM4 1722 aa34.38■■■■□ 3.09
POLR2J3-202ENST00000443430 CLIP1P30622 1438 aa34.38■■■■□ 3.09
POLR2J3-202ENST00000443430 STRCQ7RTU9 1775 aa34.37■■■■□ 3.09
POLR2J3-202ENST00000443430 DIP2CQ9Y2E4 1556 aa34.36■■■■□ 3.09
POLR2J3-202ENST00000443430 MYT1LQ9UL68 1186 aa34.36■■■■□ 3.09
POLR2J3-202ENST00000443430 CDC42BPBQ9Y5S2 1711 aa34.34■■■■□ 3.09
POLR2J3-202ENST00000443430 REREQ9P2R6 1566 aa34.33■■■■□ 3.09
POLR2J3-202ENST00000443430 DMRT2Q9Y5R5 561 aa34.33■■■■□ 3.09
POLR2J3-202ENST00000443430 UHRF1BP1Q6BDS2 1440 aa34.32■■■■□ 3.08
POLR2J3-202ENST00000443430 MLH3Q9UHC1 1453 aa34.31■■■■□ 3.08
POLR2J3-202ENST00000443430 ABCA6Q8N139 1617 aa34.3■■■■□ 3.08
POLR2J3-202ENST00000443430 TRAPPC8Q9Y2L5 1435 aa34.26■■■■□ 3.07
POLR2J3-202ENST00000443430 C3P01024 1663 aa34.25■■■■□ 3.07
POLR2J3-202ENST00000443430 AGLP35573 1532 aa34.23■■■■□ 3.07
POLR2J3-202ENST00000443430 PREX2Q70Z35 1606 aa34.22■■■■□ 3.07
POLR2J3-202ENST00000443430 ABCC1P33527 1531 aa34.22■■■■□ 3.07
POLR2J3-202ENST00000443430 ITSN2Q9NZM3 1697 aa34.19■■■■□ 3.06
POLR2J3-202ENST00000443430 PTPRTO14522 1441 aa34.17■■■■□ 3.06
POLR2J3-202ENST00000443430 ESF1Q9H501 851 aaKnown RBP34.17■■■■□ 3.06
POLR2J3-202ENST00000443430 KIDINS220Q9ULH0 1771 aa34.16■■■■□ 3.06
POLR2J3-202ENST00000443430 CASKIN1Q8WXD9 1431 aa34.15■■■■□ 3.06
POLR2J3-202ENST00000443430 CHIC1Q5VXU3 224 aa34.15■■■■□ 3.06
POLR2J3-202ENST00000443430 CCDC18Q5T9S5 1454 aa34.14■■■■□ 3.06
POLR2J3-202ENST00000443430 CDC42BPAQ5VT25 1732 aa34.11■■■■□ 3.05
POLR2J3-202ENST00000443430 CNTLNQ9NXG0 1405 aa34.08■■■■□ 3.05
POLR2J3-202ENST00000443430 DISP3Q9P2K9 1392 aa34.08■■■■□ 3.05
POLR2J3-202ENST00000443430 ILDR2Q71H61 639 aa34.05■■■■□ 3.04
POLR2J3-202ENST00000443430 LTBP4Q8N2S1 1624 aa34.04■■■■□ 3.04
POLR2J3-202ENST00000443430 NCOA1Q15788 1441 aa34.04■■■■□ 3.04
POLR2J3-202ENST00000443430 SAMD9LQ8IVG5 1584 aa34.03■■■■□ 3.04
POLR2J3-202ENST00000443430 ZNF777Q9ULD5 760 aaPredicted RBP34.01■■■■□ 3.03
POLR2J3-202ENST00000443430 MROH2AA6NES4 1674 aa33.96■■■■□ 3.03
POLR2J3-202ENST00000443430 NPATQ14207 1427 aa33.96■■■■□ 3.03
POLR2J3-202ENST00000443430 FYCO1Q9BQS8 1478 aa33.96■■■■□ 3.03
POLR2J3-202ENST00000443430 GPATCH8Q9UKJ3 1502 aaKnown RBP33.96■■■■□ 3.03
POLR2J3-202ENST00000443430 ZMYM3Q14202 1370 aa33.96■■■■□ 3.03
POLR2J3-202ENST00000443430 SYCP2Q9BX26 1530 aa33.95■■■■□ 3.03
POLR2J3-202ENST00000443430 SPAG9O60271 1321 aaKnown RBP33.95■■■■□ 3.03
POLR2J3-202ENST00000443430 HNRNPMP52272 730 aaKnown RBP eCLIP33.94■■■■□ 3.02
POLR2J3-202ENST00000443430 IQSEC2Q5JU85 1478 aa33.93■■■■□ 3.02
POLR2J3-202ENST00000443430 CAMSAP1Q5T5Y3 1602 aa33.93■■■■□ 3.02
POLR2J3-202ENST00000443430 SUPT6HQ7KZ85 1726 aaKnown RBP33.92■■■■□ 3.02
POLR2J3-202ENST00000443430 SOCS7O14512 581 aa33.9■■■■□ 3.02
POLR2J3-202ENST00000443430 ATP7AQ04656 1500 aa33.87■■■■□ 3.01
POLR2J3-202ENST00000443430 KIAA1107Q9UPP5 1409 aa33.87■■■■□ 3.01
POLR2J3-202ENST00000443430 SPATA31D1Q6ZQQ2 1576 aa33.85■■■■□ 3.01
POLR2J3-202ENST00000443430 NCKAP5LQ9HCH0 1330 aa33.84■■■■□ 3.01
POLR2J3-202ENST00000443430 CLTCQ00610 1675 aaKnown RBP33.84■■■■□ 3.01
POLR2J3-202ENST00000443430 PLXNC1O60486 1568 aa33.84■■■■□ 3.01
POLR2J3-202ENST00000443430 CFDP1Q9UEE9 299 aaPredicted RBP33.83■■■■□ 3.01
POLR2J3-202ENST00000443430 A2MP01023 1474 aa33.82■■■■□ 3.01
POLR2J3-202ENST00000443430 INO80Q9ULG1 1556 aaPredicted RBP33.82■■■■□ 3
POLR2J3-202ENST00000443430 PLEKHH2Q8IVE3 1493 aa33.82■■■■□ 3
POLR2J3-202ENST00000443430 PTPRKQ15262 1439 aa33.79■■■■□ 3
POLR2J3-202ENST00000443430 MYO3AQ8NEV4 1616 aa33.78■■■■□ 3
POLR2J3-202ENST00000443430 ZNF335Q9H4Z2 1342 aaPredicted RBP33.78■■■■□ 3
POLR2J3-202ENST00000443430 ZNF142P52746 1687 aaPredicted RBP33.77■■■■□ 3
POLR2J3-202ENST00000443430 CCNB3Q8WWL7 1395 aa33.77■■■■□ 3
POLR2J3-202ENST00000443430 GGT6Q6P531 493 aa33.77■■■■□ 3
POLR2J3-202ENST00000443430 PLA2R1Q13018 1463 aa33.76■■■□□ 2.99
POLR2J3-202ENST00000443430 PKD2Q13563 968 aa33.75■■■□□ 2.99
POLR2J3-202ENST00000443430 CEP170BQ9Y4F5 1589 aaPredicted RBP33.73■■■□□ 2.99
POLR2J3-202ENST00000443430 TCOF1Q13428 1488 aaKnown RBP33.71■■■□□ 2.99
POLR2J3-202ENST00000443430 PPP6R1Q9UPN7 881 aa33.69■■■□□ 2.98
POLR2J3-202ENST00000443430 MTUS2Q5JR59 1369 aa33.69■■■□□ 2.98
POLR2J3-202ENST00000443430 ADGBQ8N7X0 1667 aa33.68■■■□□ 2.98
POLR2J3-202ENST00000443430 UBAP1LF5GYI3 381 aa33.67■■■□□ 2.98
POLR2J3-202ENST00000443430 ZNF644Q9H582 1327 aaPredicted RBP33.67■■■□□ 2.98
POLR2J3-202ENST00000443430 MBD5Q9P267 1494 aa33.63■■■□□ 2.97
POLR2J3-202ENST00000443430 TIAM1Q13009 1591 aa33.61■■■□□ 2.97
POLR2J3-202ENST00000443430 A2ML1A8K2U0 1454 aa33.59■■■□□ 2.97
POLR2J3-202ENST00000443430 RTEL1-TNFRSF6BF6WH68 1400 aa33.57■■■□□ 2.96
POLR2J3-202ENST00000443430 DNMT1P26358 1616 aaKnown RBP33.57■■■□□ 2.96
POLR2J3-202ENST00000443430 DHX29Q7Z478 1369 aaKnown RBP33.56■■■□□ 2.96
POLR2J3-202ENST00000443430 EHBP1L1Q8N3D4 1523 aa33.53■■■□□ 2.96
POLR2J3-202ENST00000443430 CEP162Q5TB80 1403 aa33.5■■■□□ 2.95
POLR2J3-202ENST00000443430 FBXO31Q5XUX0 539 aaPredicted RBP33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms