RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
CCDC113-202ENST00000443128 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
CCDC113-202ENST00000443128 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
CCDC113-202ENST00000443128 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
CCDC113-202ENST00000443128 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
CCDC113-202ENST00000443128 L3MBTL2Q969R5 705 aa11.67□□□□□ -0.54
CCDC113-202ENST00000443128 FYCO1Q9BQS8 1478 aa11.66□□□□□ -0.54
CCDC113-202ENST00000443128 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
CCDC113-202ENST00000443128 POGKQ9P215 609 aa11.65□□□□□ -0.54
CCDC113-202ENST00000443128 TMF1P82094 1093 aa11.65□□□□□ -0.54
CCDC113-202ENST00000443128 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
CCDC113-202ENST00000443128 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.54
CCDC113-202ENST00000443128 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.55
CCDC113-202ENST00000443128 NCOA2Q15596 1464 aa11.64□□□□□ -0.55
CCDC113-202ENST00000443128 CC2D1BQ5T0F9 858 aaKnown RBP11.63□□□□□ -0.55
CCDC113-202ENST00000443128 ROCK2O75116 1388 aaKnown RBP11.62□□□□□ -0.55
CCDC113-202ENST00000443128 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
CCDC113-202ENST00000443128 CCDC136Q96JN2 1154 aa11.61□□□□□ -0.55
CCDC113-202ENST00000443128 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
CCDC113-202ENST00000443128 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
CCDC113-202ENST00000443128 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
CCDC113-202ENST00000443128 CFAP53Q96M91 514 aa11.6□□□□□ -0.55
CCDC113-202ENST00000443128 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
CCDC113-202ENST00000443128 RRBP1Q9P2E9 1410 aaKnown RBP11.58□□□□□ -0.56
CCDC113-202ENST00000443128 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-202ENST00000443128 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-202ENST00000443128 SAFB2Q14151 953 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC113-202ENST00000443128 WASHC2CQ9Y4E1 1318 aa11.58□□□□□ -0.56
CCDC113-202ENST00000443128 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
CCDC113-202ENST00000443128 CCER2I3L3R5 266 aa11.56□□□□□ -0.56
CCDC113-202ENST00000443128 KIAA0586Q9BVV6 1533 aa11.56□□□□□ -0.56
CCDC113-202ENST00000443128 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
CCDC113-202ENST00000443128 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
CCDC113-202ENST00000443128 STK26Q9P289 416 aa11.56□□□□□ -0.56
CCDC113-202ENST00000443128 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
CCDC113-202ENST00000443128 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
CCDC113-202ENST00000443128 CCDC144AA2RUR9 1427 aa11.55□□□□□ -0.56
CCDC113-202ENST00000443128 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
CCDC113-202ENST00000443128 SRPK2P78362 688 aaKnown RBP11.55□□□□□ -0.56
CCDC113-202ENST00000443128 SUPT16HQ9Y5B9 1047 aaKnown RBP11.55□□□□□ -0.56
CCDC113-202ENST00000443128 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
CCDC113-202ENST00000443128 CUL7Q14999 1698 aa11.55□□□□□ -0.56
CCDC113-202ENST00000443128 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
CCDC113-202ENST00000443128 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
CCDC113-202ENST00000443128 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
CCDC113-202ENST00000443128 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
CCDC113-202ENST00000443128 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
CCDC113-202ENST00000443128 HECW1Q76N89 1606 aa11.52□□□□□ -0.57
CCDC113-202ENST00000443128 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
CCDC113-202ENST00000443128 NUTM2DQ5VT03 806 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-202ENST00000443128 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
CCDC113-202ENST00000443128 NUDCQ9Y266 331 aa11.5□□□□□ -0.57
CCDC113-202ENST00000443128 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
CCDC113-202ENST00000443128 TROQ12816 1431 aaPredicted RBP11.49□□□□□ -0.57
CCDC113-202ENST00000443128 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
CCDC113-202ENST00000443128 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CCDC113-202ENST00000443128 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
CCDC113-202ENST00000443128 MAPK8IP3Q9UPT6 1336 aa11.49□□□□□ -0.57
CCDC113-202ENST00000443128 EIF3AQ14152 1382 aaKnown RBP11.49□□□□□ -0.57
CCDC113-202ENST00000443128 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
CCDC113-202ENST00000443128 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
CCDC113-202ENST00000443128 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
CCDC113-202ENST00000443128 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
CCDC113-202ENST00000443128 U2SURPO15042 1029 aaKnown RBP11.48□□□□□ -0.57
CCDC113-202ENST00000443128 EPRSP07814 1512 aaKnown RBP11.48□□□□□ -0.57
CCDC113-202ENST00000443128 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
CCDC113-202ENST00000443128 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
CCDC113-202ENST00000443128 AFAP1Q8N556 730 aa11.46□□□□□ -0.57
CCDC113-202ENST00000443128 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.58
CCDC113-202ENST00000443128 RALBP1Q15311 655 aa11.45□□□□□ -0.58
CCDC113-202ENST00000443128 SUPT6HQ7KZ85 1726 aaKnown RBP11.44□□□□□ -0.58
CCDC113-202ENST00000443128 USP47Q96K76 1375 aa11.44□□□□□ -0.58
CCDC113-202ENST00000443128 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
CCDC113-202ENST00000443128 TRAK1Q9UPV9 953 aa11.43□□□□□ -0.58
CCDC113-202ENST00000443128 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
CCDC113-202ENST00000443128 HDGFL2Q7Z4V5 671 aaPredicted RBP11.43□□□□□ -0.58
CCDC113-202ENST00000443128 SOX12O15370 315 aa11.42□□□□□ -0.58
CCDC113-202ENST00000443128 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
CCDC113-202ENST00000443128 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
CCDC113-202ENST00000443128 C9orf84Q5VXU9 1444 aa11.42□□□□□ -0.58
CCDC113-202ENST00000443128 WDR62O43379 1518 aa11.41□□□□□ -0.58
CCDC113-202ENST00000443128 MYH16Q9H6N6 1097 aa11.4□□□□□ -0.58
CCDC113-202ENST00000443128 DAPK1P53355 1430 aa11.4□□□□□ -0.58
CCDC113-202ENST00000443128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC113-202ENST00000443128 A0A0G2JS52 829 aa11.39□□□□□ -0.59
CCDC113-202ENST00000443128 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
CCDC113-202ENST00000443128 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
CCDC113-202ENST00000443128 FTSJ3Q8IY81 847 aaKnown RBP11.38□□□□□ -0.59
CCDC113-202ENST00000443128 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
CCDC113-202ENST00000443128 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
CCDC113-202ENST00000443128 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
CCDC113-202ENST00000443128 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
CCDC113-202ENST00000443128 PANK3Q9H999 370 aa11.37□□□□□ -0.59
CCDC113-202ENST00000443128 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
CCDC113-202ENST00000443128 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
CCDC113-202ENST00000443128 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
CCDC113-202ENST00000443128 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
CCDC113-202ENST00000443128 TERF2IPQ9NYB0 399 aa11.36□□□□□ -0.59
CCDC113-202ENST00000443128 PRKRIP1Q9H875 184 aaPredicted RBP11.35□□□□□ -0.59
CCDC113-202ENST00000443128 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms