RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
RPSA-202ENST00000443003 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
RPSA-202ENST00000443003 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
RPSA-202ENST00000443003 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
RPSA-202ENST00000443003 SCAPERQ9BY12 1400 aa12.53□□□□□ -0.4
RPSA-202ENST00000443003 CERKQ8TCT0 537 aa12.52□□□□□ -0.41
RPSA-202ENST00000443003 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.41
RPSA-202ENST00000443003 EEA1Q15075 1411 aa12.51□□□□□ -0.41
RPSA-202ENST00000443003 C9orf84Q5VXU9 1444 aa12.51□□□□□ -0.41
RPSA-202ENST00000443003 KIF14Q15058 1648 aa12.51□□□□□ -0.41
RPSA-202ENST00000443003 STRCQ7RTU9 1775 aa12.49□□□□□ -0.41
RPSA-202ENST00000443003 PLCH2O75038 1416 aa12.49□□□□□ -0.41
RPSA-202ENST00000443003 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
RPSA-202ENST00000443003 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
RPSA-202ENST00000443003 ATP10AO60312 1499 aa12.48□□□□□ -0.41
RPSA-202ENST00000443003 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
RPSA-202ENST00000443003 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
RPSA-202ENST00000443003 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.41
RPSA-202ENST00000443003 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
RPSA-202ENST00000443003 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
RPSA-202ENST00000443003 C3P01024 1663 aa12.45□□□□□ -0.42
RPSA-202ENST00000443003 ABCA6Q8N139 1617 aa12.45□□□□□ -0.42
RPSA-202ENST00000443003 DIP2CQ9Y2E4 1556 aa12.45□□□□□ -0.42
RPSA-202ENST00000443003 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
RPSA-202ENST00000443003 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
RPSA-202ENST00000443003 KDM5CP41229 1560 aa12.44□□□□□ -0.42
RPSA-202ENST00000443003 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
RPSA-202ENST00000443003 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
RPSA-202ENST00000443003 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
RPSA-202ENST00000443003 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
RPSA-202ENST00000443003 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
RPSA-202ENST00000443003 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
RPSA-202ENST00000443003 ARHGAP35Q9NRY4 1499 aa12.4□□□□□ -0.42
RPSA-202ENST00000443003 CLIP1P30622 1438 aa12.4□□□□□ -0.42
RPSA-202ENST00000443003 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
RPSA-202ENST00000443003 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
RPSA-202ENST00000443003 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
RPSA-202ENST00000443003 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
RPSA-202ENST00000443003 ILDR2Q71H61 639 aa12.39□□□□□ -0.43
RPSA-202ENST00000443003 CDK11AQ9UQ88 783 aaPredicted RBP12.39□□□□□ -0.43
RPSA-202ENST00000443003 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
RPSA-202ENST00000443003 DMRT2Q9Y5R5 561 aa12.38□□□□□ -0.43
RPSA-202ENST00000443003 ABCC1P33527 1531 aa12.37□□□□□ -0.43
RPSA-202ENST00000443003 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
RPSA-202ENST00000443003 ESF1Q9H501 851 aaKnown RBP12.36□□□□□ -0.43
RPSA-202ENST00000443003 CDC42BPAQ5VT25 1732 aa12.36□□□□□ -0.43
RPSA-202ENST00000443003 KIDINS220Q9ULH0 1771 aa12.35□□□□□ -0.43
RPSA-202ENST00000443003 PTPRTO14522 1441 aa12.34□□□□□ -0.43
RPSA-202ENST00000443003 TRAPPC8Q9Y2L5 1435 aa12.34□□□□□ -0.43
RPSA-202ENST00000443003 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
RPSA-202ENST00000443003 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
RPSA-202ENST00000443003 AGLP35573 1532 aa12.33□□□□□ -0.44
RPSA-202ENST00000443003 SOCS7O14512 581 aa12.33□□□□□ -0.44
RPSA-202ENST00000443003 CAMSAP1Q5T5Y3 1602 aa12.32□□□□□ -0.44
RPSA-202ENST00000443003 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
RPSA-202ENST00000443003 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
RPSA-202ENST00000443003 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
RPSA-202ENST00000443003 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
RPSA-202ENST00000443003 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
RPSA-202ENST00000443003 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
RPSA-202ENST00000443003 CNTLNQ9NXG0 1405 aa12.29□□□□□ -0.44
RPSA-202ENST00000443003 SAMD9LQ8IVG5 1584 aa12.29□□□□□ -0.44
RPSA-202ENST00000443003 ZNF142P52746 1687 aaPredicted RBP12.28□□□□□ -0.44
RPSA-202ENST00000443003 IQSEC2Q5JU85 1478 aa12.27□□□□□ -0.44
RPSA-202ENST00000443003 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
RPSA-202ENST00000443003 ATP7AQ04656 1500 aa12.26□□□□□ -0.45
RPSA-202ENST00000443003 CASKIN1Q8WXD9 1431 aa12.25□□□□□ -0.45
RPSA-202ENST00000443003 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
RPSA-202ENST00000443003 NPATQ14207 1427 aa12.24□□□□□ -0.45
RPSA-202ENST00000443003 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
RPSA-202ENST00000443003 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
RPSA-202ENST00000443003 ZNF335Q9H4Z2 1342 aaPredicted RBP12.23□□□□□ -0.45
RPSA-202ENST00000443003 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
RPSA-202ENST00000443003 FYCO1Q9BQS8 1478 aa12.22□□□□□ -0.45
RPSA-202ENST00000443003 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
RPSA-202ENST00000443003 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
RPSA-202ENST00000443003 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
RPSA-202ENST00000443003 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
RPSA-202ENST00000443003 ADGBQ8N7X0 1667 aa12.21□□□□□ -0.45
RPSA-202ENST00000443003 HNRNPMP52272 730 aaKnown RBP eCLIP12.2□□□□□ -0.46
RPSA-202ENST00000443003 GPATCH8Q9UKJ3 1502 aaKnown RBP12.2□□□□□ -0.46
RPSA-202ENST00000443003 A2MP01023 1474 aa12.2□□□□□ -0.46
RPSA-202ENST00000443003 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
RPSA-202ENST00000443003 SCAF1Q9H7N4 1312 aaKnown RBP12.18□□□□□ -0.46
RPSA-202ENST00000443003 GGT6Q6P531 493 aa12.18□□□□□ -0.46
RPSA-202ENST00000443003 PTPRKQ15262 1439 aa12.18□□□□□ -0.46
RPSA-202ENST00000443003 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
RPSA-202ENST00000443003 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
RPSA-202ENST00000443003 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
RPSA-202ENST00000443003 PPP6R1Q9UPN7 881 aa12.16□□□□□ -0.46
RPSA-202ENST00000443003 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
RPSA-202ENST00000443003 MED1Q15648 1581 aaPredicted RBP12.15□□□□□ -0.46
RPSA-202ENST00000443003 PKD2Q13563 968 aa12.15□□□□□ -0.46
RPSA-202ENST00000443003 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.46
RPSA-202ENST00000443003 A2ML1A8K2U0 1454 aa12.14□□□□□ -0.47
RPSA-202ENST00000443003 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
RPSA-202ENST00000443003 KIAA1107Q9UPP5 1409 aa12.13□□□□□ -0.47
RPSA-202ENST00000443003 PIP4K2BP78356 416 aa12.13□□□□□ -0.47
RPSA-202ENST00000443003 NEURL4Q96JN8 1562 aa12.13□□□□□ -0.47
RPSA-202ENST00000443003 MTUS2Q5JR59 1369 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms