RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
CDH23-207ENST00000442677 MFAP1P55081 439 aaKnown RBP19.78■□□□□ 0.76
CDH23-207ENST00000442677 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
CDH23-207ENST00000442677 SETQ01105 290 aaPredicted RBP19.78■□□□□ 0.76
CDH23-207ENST00000442677 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.75
CDH23-207ENST00000442677 PATL2C9JE40 543 aaKnown RBP19.76■□□□□ 0.75
CDH23-207ENST00000442677 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
CDH23-207ENST00000442677 SOX12O15370 315 aa19.75■□□□□ 0.75
CDH23-207ENST00000442677 CALD1Q05682 793 aaKnown RBP19.75■□□□□ 0.75
CDH23-207ENST00000442677 POGKQ9P215 609 aa19.75■□□□□ 0.75
CDH23-207ENST00000442677 TIMELESSQ9UNS1 1208 aa19.74■□□□□ 0.75
CDH23-207ENST00000442677 NOL8Q76FK4 1167 aaKnown RBP19.74■□□□□ 0.75
CDH23-207ENST00000442677 FOXD4L5Q5VV16 416 aaPredicted RBP19.73■□□□□ 0.75
CDH23-207ENST00000442677 FOXD4L4Q8WXT5 416 aaPredicted RBP19.73■□□□□ 0.75
CDH23-207ENST00000442677 RSPH6AQ9H0K4 717 aa19.73■□□□□ 0.75
CDH23-207ENST00000442677 ZNF771Q7L3S4 317 aaPredicted RBP19.73■□□□□ 0.75
CDH23-207ENST00000442677 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
CDH23-207ENST00000442677 CHMP7Q8WUX9 453 aaPredicted RBP19.72■□□□□ 0.75
CDH23-207ENST00000442677 MYO15BQ96JP2 1530 aa19.71■□□□□ 0.75
CDH23-207ENST00000442677 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
CDH23-207ENST00000442677 HTATSF1O43719 755 aaKnown RBP19.7■□□□□ 0.74
CDH23-207ENST00000442677 ITPRIPQ8IWB1 547 aa19.7■□□□□ 0.74
CDH23-207ENST00000442677 TCERG1O14776 1098 aaKnown RBP19.69■□□□□ 0.74
CDH23-207ENST00000442677 CALRP27797 417 aaKnown RBP19.68■□□□□ 0.74
CDH23-207ENST00000442677 CCAR2Q8N163 923 aaKnown RBP19.67■□□□□ 0.74
CDH23-207ENST00000442677 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
CDH23-207ENST00000442677 TRIM6-TRIM34B2RNG4 842 aa19.63■□□□□ 0.73
CDH23-207ENST00000442677 RWDD1Q9H446 243 aaPredicted RBP19.63■□□□□ 0.73
CDH23-207ENST00000442677 TMF1P82094 1093 aa19.62■□□□□ 0.73
CDH23-207ENST00000442677 TPM3P06753 285 aa19.62■□□□□ 0.73
CDH23-207ENST00000442677 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
CDH23-207ENST00000442677 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
CDH23-207ENST00000442677 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
CDH23-207ENST00000442677 FBXO3Q9UK99 471 aa19.6■□□□□ 0.73
CDH23-207ENST00000442677 CSPP1Q1MSJ5 1256 aa19.6■□□□□ 0.73
CDH23-207ENST00000442677 PHF14O94880 888 aa19.6■□□□□ 0.73
CDH23-207ENST00000442677 RASSF8Q8NHQ8 419 aa19.59■□□□□ 0.73
CDH23-207ENST00000442677 RTF1Q92541 710 aaKnown RBP19.59■□□□□ 0.73
CDH23-207ENST00000442677 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
CDH23-207ENST00000442677 SLC4A3P48751 1232 aa19.59■□□□□ 0.73
CDH23-207ENST00000442677 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
CDH23-207ENST00000442677 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
CDH23-207ENST00000442677 ZNF592Q92610 1267 aa19.59■□□□□ 0.73
CDH23-207ENST00000442677 FOXD4L6Q3SYB3 417 aaPredicted RBP19.58■□□□□ 0.73
CDH23-207ENST00000442677 FOXD4L3Q6VB84 417 aaPredicted RBP19.58■□□□□ 0.73
CDH23-207ENST00000442677 PES1O00541 588 aaKnown RBP19.58■□□□□ 0.73
CDH23-207ENST00000442677 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.72
CDH23-207ENST00000442677 SAFB2Q14151 953 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDH23-207ENST00000442677 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
CDH23-207ENST00000442677 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
CDH23-207ENST00000442677 SRPK2P78362 688 aaKnown RBP19.55■□□□□ 0.72
CDH23-207ENST00000442677 CFDP1Q9UEE9 299 aaPredicted RBP19.55■□□□□ 0.72
CDH23-207ENST00000442677 CEP89Q96ST8 783 aa19.55■□□□□ 0.72
CDH23-207ENST00000442677 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
CDH23-207ENST00000442677 GSE1Q14687 1217 aa19.54■□□□□ 0.72
CDH23-207ENST00000442677 DDX11L8A8MPP1 907 aa19.52■□□□□ 0.72
CDH23-207ENST00000442677 ZNF330Q9Y3S2 320 aaPredicted RBP19.52■□□□□ 0.72
CDH23-207ENST00000442677 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.71
CDH23-207ENST00000442677 CCDC34Q96HJ3 373 aa19.51■□□□□ 0.71
CDH23-207ENST00000442677 CHMP3Q9Y3E7 222 aa19.5■□□□□ 0.71
CDH23-207ENST00000442677 SF3A1Q15459 793 aaKnown RBP19.5■□□□□ 0.71
CDH23-207ENST00000442677 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
CDH23-207ENST00000442677 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
CDH23-207ENST00000442677 BCL11BQ9C0K0 894 aaPredicted RBP19.49■□□□□ 0.71
CDH23-207ENST00000442677 KTN1Q86UP2 1357 aaKnown RBP19.49■□□□□ 0.71
CDH23-207ENST00000442677 GOLGA3Q08378 1498 aa19.49■□□□□ 0.71
CDH23-207ENST00000442677 GPS2Q13227 327 aa19.48■□□□□ 0.71
CDH23-207ENST00000442677 TAF7LQ5H9L4 462 aa19.48■□□□□ 0.71
CDH23-207ENST00000442677 CLUAP1Q96AJ1 413 aa19.48■□□□□ 0.71
CDH23-207ENST00000442677 GOLGA6L19H0YKK7 550 aa19.48■□□□□ 0.71
CDH23-207ENST00000442677 GORABQ5T7V8 394 aa19.48■□□□□ 0.71
CDH23-207ENST00000442677 WWC1Q8IX03 1113 aa19.47■□□□□ 0.71
CDH23-207ENST00000442677 KIF16BQ96L93 1317 aa19.47■□□□□ 0.71
CDH23-207ENST00000442677 GPATCH3Q96I76 525 aa19.47■□□□□ 0.71
CDH23-207ENST00000442677 ST18O60284 1047 aa19.47■□□□□ 0.71
CDH23-207ENST00000442677 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
CDH23-207ENST00000442677 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
CDH23-207ENST00000442677 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
CDH23-207ENST00000442677 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
CDH23-207ENST00000442677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.44■□□□□ 0.7
CDH23-207ENST00000442677 TEX35Q5T0J7 233 aa19.44■□□□□ 0.7
CDH23-207ENST00000442677 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
CDH23-207ENST00000442677 H3BQV1 296 aa19.43■□□□□ 0.7
CDH23-207ENST00000442677 IFFO2Q5TF58 517 aa19.43■□□□□ 0.7
CDH23-207ENST00000442677 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
CDH23-207ENST00000442677 VPS53Q5VIR6 699 aa19.42■□□□□ 0.7
CDH23-207ENST00000442677 BECN2A8MW95 431 aa19.41■□□□□ 0.7
CDH23-207ENST00000442677 CCDC70Q6NSX1 233 aa19.41■□□□□ 0.7
CDH23-207ENST00000442677 TOMM22Q9NS69 142 aa19.4■□□□□ 0.7
CDH23-207ENST00000442677 STK26Q9P289 416 aa19.4■□□□□ 0.7
CDH23-207ENST00000442677 MARCH6O60337 910 aa19.38■□□□□ 0.69
CDH23-207ENST00000442677 RRP12Q5JTH9 1297 aaKnown RBP19.38■□□□□ 0.69
CDH23-207ENST00000442677 CCDC9Q9Y3X0 531 aaKnown RBP19.37■□□□□ 0.69
CDH23-207ENST00000442677 FOXD1Q16676 465 aa19.36■□□□□ 0.69
CDH23-207ENST00000442677 HOMER1Q86YM7 354 aa19.36■□□□□ 0.69
CDH23-207ENST00000442677 RILPL2Q969X0 211 aa19.36■□□□□ 0.69
CDH23-207ENST00000442677 SKOR2Q2VWA4 1001 aaPredicted RBP19.35■□□□□ 0.69
CDH23-207ENST00000442677 FAM184AQ8NB25 1140 aa19.35■□□□□ 0.69
CDH23-207ENST00000442677 PDE4AP27815 886 aa19.35■□□□□ 0.69
CDH23-207ENST00000442677 TPM1P09493 284 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms