RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 HECW1Q76N89 1606 aa18.22■□□□□ 0.51
GACAT3-202ENST00000442387 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
GACAT3-202ENST00000442387 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
GACAT3-202ENST00000442387 MLECQ14165 292 aa18.19■□□□□ 0.5
GACAT3-202ENST00000442387 ARHGAP35Q9NRY4 1499 aa18.19■□□□□ 0.5
GACAT3-202ENST00000442387 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
GACAT3-202ENST00000442387 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
GACAT3-202ENST00000442387 HSPA2P54652 639 aa18.17■□□□□ 0.5
GACAT3-202ENST00000442387 ATP10AO60312 1499 aa18.15■□□□□ 0.5
GACAT3-202ENST00000442387 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
GACAT3-202ENST00000442387 KIF14Q15058 1648 aa18.13■□□□□ 0.49
GACAT3-202ENST00000442387 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
GACAT3-202ENST00000442387 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
GACAT3-202ENST00000442387 CLIP1P30622 1438 aa18.12■□□□□ 0.49
GACAT3-202ENST00000442387 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
GACAT3-202ENST00000442387 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
GACAT3-202ENST00000442387 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
GACAT3-202ENST00000442387 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
GACAT3-202ENST00000442387 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
GACAT3-202ENST00000442387 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
GACAT3-202ENST00000442387 KDM5CP41229 1560 aa18.06■□□□□ 0.48
GACAT3-202ENST00000442387 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
GACAT3-202ENST00000442387 CEBPAP49715 358 aaPredicted RBP18.04■□□□□ 0.48
GACAT3-202ENST00000442387 CERKQ8TCT0 537 aa18.02■□□□□ 0.48
GACAT3-202ENST00000442387 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
GACAT3-202ENST00000442387 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
GACAT3-202ENST00000442387 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
GACAT3-202ENST00000442387 MLH3Q9UHC1 1453 aa18.01■□□□□ 0.47
GACAT3-202ENST00000442387 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
GACAT3-202ENST00000442387 PREX1Q8TCU6 1659 aa18■□□□□ 0.47
GACAT3-202ENST00000442387 REREQ9P2R6 1566 aa18■□□□□ 0.47
GACAT3-202ENST00000442387 CDC42BPBQ9Y5S2 1711 aa17.98■□□□□ 0.47
GACAT3-202ENST00000442387 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
GACAT3-202ENST00000442387 ABCC1P33527 1531 aa17.98■□□□□ 0.47
GACAT3-202ENST00000442387 UHRF1BP1Q6BDS2 1440 aa17.98■□□□□ 0.47
GACAT3-202ENST00000442387 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
GACAT3-202ENST00000442387 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
GACAT3-202ENST00000442387 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
GACAT3-202ENST00000442387 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
GACAT3-202ENST00000442387 AGLP35573 1532 aa17.94■□□□□ 0.46
GACAT3-202ENST00000442387 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
GACAT3-202ENST00000442387 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
GACAT3-202ENST00000442387 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
GACAT3-202ENST00000442387 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.45
GACAT3-202ENST00000442387 C3P01024 1663 aa17.88■□□□□ 0.45
GACAT3-202ENST00000442387 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
GACAT3-202ENST00000442387 CDC42BPAQ5VT25 1732 aa17.87■□□□□ 0.45
GACAT3-202ENST00000442387 KIDINS220Q9ULH0 1771 aa17.87■□□□□ 0.45
GACAT3-202ENST00000442387 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
GACAT3-202ENST00000442387 SAMD9LQ8IVG5 1584 aa17.86■□□□□ 0.45
GACAT3-202ENST00000442387 PTPRTO14522 1441 aa17.85■□□□□ 0.45
GACAT3-202ENST00000442387 SPAG9O60271 1321 aaKnown RBP17.85■□□□□ 0.45
GACAT3-202ENST00000442387 SYCP2Q9BX26 1530 aa17.85■□□□□ 0.45
GACAT3-202ENST00000442387 HNRNPMP52272 730 aaKnown RBP eCLIP17.83■□□□□ 0.44
GACAT3-202ENST00000442387 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
GACAT3-202ENST00000442387 KIAA1107Q9UPP5 1409 aa17.81■□□□□ 0.44
GACAT3-202ENST00000442387 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
GACAT3-202ENST00000442387 PLEKHH2Q8IVE3 1493 aa17.81■□□□□ 0.44
GACAT3-202ENST00000442387 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
GACAT3-202ENST00000442387 NPATQ14207 1427 aa17.8■□□□□ 0.44
GACAT3-202ENST00000442387 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
GACAT3-202ENST00000442387 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
GACAT3-202ENST00000442387 ATP7AQ04656 1500 aa17.79■□□□□ 0.44
GACAT3-202ENST00000442387 MTUS2Q5JR59 1369 aa17.78■□□□□ 0.44
GACAT3-202ENST00000442387 MROH2AA6NES4 1674 aa17.77■□□□□ 0.43
GACAT3-202ENST00000442387 A2MP01023 1474 aa17.76■□□□□ 0.43
GACAT3-202ENST00000442387 INO80Q9ULG1 1556 aaPredicted RBP17.76■□□□□ 0.43
GACAT3-202ENST00000442387 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
GACAT3-202ENST00000442387 SUPT6HQ7KZ85 1726 aaKnown RBP17.75■□□□□ 0.43
GACAT3-202ENST00000442387 CAMSAP1Q5T5Y3 1602 aa17.74■□□□□ 0.43
GACAT3-202ENST00000442387 LTBP4Q8N2S1 1624 aa17.74■□□□□ 0.43
GACAT3-202ENST00000442387 GGT6Q6P531 493 aa17.73■□□□□ 0.43
GACAT3-202ENST00000442387 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
GACAT3-202ENST00000442387 IQSEC2Q5JU85 1478 aa17.71■□□□□ 0.43
GACAT3-202ENST00000442387 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.42
GACAT3-202ENST00000442387 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
GACAT3-202ENST00000442387 PTPRKQ15262 1439 aa17.7■□□□□ 0.42
GACAT3-202ENST00000442387 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
GACAT3-202ENST00000442387 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
GACAT3-202ENST00000442387 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
GACAT3-202ENST00000442387 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
GACAT3-202ENST00000442387 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
GACAT3-202ENST00000442387 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
GACAT3-202ENST00000442387 MBD5Q9P267 1494 aa17.68■□□□□ 0.42
GACAT3-202ENST00000442387 PKD2Q13563 968 aa17.67■□□□□ 0.42
GACAT3-202ENST00000442387 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
GACAT3-202ENST00000442387 CEP162Q5TB80 1403 aa17.66■□□□□ 0.42
GACAT3-202ENST00000442387 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
GACAT3-202ENST00000442387 ADGBQ8N7X0 1667 aa17.66■□□□□ 0.42
GACAT3-202ENST00000442387 RTEL1-TNFRSF6BF6WH68 1400 aa17.65■□□□□ 0.42
GACAT3-202ENST00000442387 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
GACAT3-202ENST00000442387 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
GACAT3-202ENST00000442387 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
GACAT3-202ENST00000442387 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
GACAT3-202ENST00000442387 A2ML1A8K2U0 1454 aa17.6■□□□□ 0.41
GACAT3-202ENST00000442387 CCDC141Q6ZP82 1450 aa17.6■□□□□ 0.41
GACAT3-202ENST00000442387 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
GACAT3-202ENST00000442387 KIF3BO15066 747 aa17.59■□□□□ 0.41
GACAT3-202ENST00000442387 NCOA2Q15596 1464 aa17.58■□□□□ 0.41
GACAT3-202ENST00000442387 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms