RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
SLC48A1-201ENST00000442218 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
SLC48A1-201ENST00000442218 ANP32EQ9BTT0 268 aa18.34■□□□□ 0.53
SLC48A1-201ENST00000442218 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
SLC48A1-201ENST00000442218 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.52
SLC48A1-201ENST00000442218 NAIPQ13075 1403 aa18.32■□□□□ 0.52
SLC48A1-201ENST00000442218 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
SLC48A1-201ENST00000442218 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
SLC48A1-201ENST00000442218 ZNF326Q5BKZ1 582 aaKnown RBP18.29■□□□□ 0.52
SLC48A1-201ENST00000442218 WASHC2AQ641Q2 1341 aa18.29■□□□□ 0.52
SLC48A1-201ENST00000442218 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
SLC48A1-201ENST00000442218 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
SLC48A1-201ENST00000442218 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
SLC48A1-201ENST00000442218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.25■□□□□ 0.51
SLC48A1-201ENST00000442218 KDM6BO15054 1643 aa18.25■□□□□ 0.51
SLC48A1-201ENST00000442218 L3MBTL2Q969R5 705 aa18.25■□□□□ 0.51
SLC48A1-201ENST00000442218 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
SLC48A1-201ENST00000442218 ERCC6L2Q5T890 1561 aa18.23■□□□□ 0.51
SLC48A1-201ENST00000442218 PTPRGP23470 1445 aa18.23■□□□□ 0.51
SLC48A1-201ENST00000442218 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
SLC48A1-201ENST00000442218 ABCA8O94911 1581 aa18.22■□□□□ 0.51
SLC48A1-201ENST00000442218 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
SLC48A1-201ENST00000442218 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
SLC48A1-201ENST00000442218 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
SLC48A1-201ENST00000442218 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
SLC48A1-201ENST00000442218 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
SLC48A1-201ENST00000442218 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
SLC48A1-201ENST00000442218 ATP10BO94823 1461 aa18.18■□□□□ 0.5
SLC48A1-201ENST00000442218 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
SLC48A1-201ENST00000442218 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
SLC48A1-201ENST00000442218 TROQ12816 1431 aaPredicted RBP18.17■□□□□ 0.5
SLC48A1-201ENST00000442218 MSH5O43196 834 aa18.17■□□□□ 0.5
SLC48A1-201ENST00000442218 NBPF8Q3BBV2 869 aa18.16■□□□□ 0.5
SLC48A1-201ENST00000442218 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
SLC48A1-201ENST00000442218 KIF14Q15058 1648 aa18.15■□□□□ 0.5
SLC48A1-201ENST00000442218 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
SLC48A1-201ENST00000442218 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.5
SLC48A1-201ENST00000442218 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
SLC48A1-201ENST00000442218 PLEKHD1A6NEE1 506 aa18.12■□□□□ 0.49
SLC48A1-201ENST00000442218 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
SLC48A1-201ENST00000442218 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.48
SLC48A1-201ENST00000442218 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
SLC48A1-201ENST00000442218 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
SLC48A1-201ENST00000442218 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
SLC48A1-201ENST00000442218 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
SLC48A1-201ENST00000442218 ABCC5O15440 1437 aa18.03■□□□□ 0.48
SLC48A1-201ENST00000442218 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
SLC48A1-201ENST00000442218 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.47
SLC48A1-201ENST00000442218 DAPK1P53355 1430 aa18.02■□□□□ 0.47
SLC48A1-201ENST00000442218 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
SLC48A1-201ENST00000442218 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
SLC48A1-201ENST00000442218 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
SLC48A1-201ENST00000442218 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
SLC48A1-201ENST00000442218 CCDC7Q96M83 1385 aa18■□□□□ 0.47
SLC48A1-201ENST00000442218 ITSN2Q9NZM3 1697 aa17.99■□□□□ 0.47
SLC48A1-201ENST00000442218 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
SLC48A1-201ENST00000442218 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
SLC48A1-201ENST00000442218 PKD2Q13563 968 aa17.98■□□□□ 0.47
SLC48A1-201ENST00000442218 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
SLC48A1-201ENST00000442218 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
SLC48A1-201ENST00000442218 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
SLC48A1-201ENST00000442218 OSCARQ8IYS5 282 aa17.96■□□□□ 0.46
SLC48A1-201ENST00000442218 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
SLC48A1-201ENST00000442218 GCC2Q8IWJ2 1684 aa17.94■□□□□ 0.46
SLC48A1-201ENST00000442218 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
SLC48A1-201ENST00000442218 AKNAQ7Z591 1439 aa17.92■□□□□ 0.46
SLC48A1-201ENST00000442218 ZCCHC11Q5TAX3 1644 aaKnown RBP17.91■□□□□ 0.46
SLC48A1-201ENST00000442218 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
SLC48A1-201ENST00000442218 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
SLC48A1-201ENST00000442218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
SLC48A1-201ENST00000442218 TTC37Q6PGP7 1564 aa17.89■□□□□ 0.45
SLC48A1-201ENST00000442218 NBR1Q14596 966 aa17.89■□□□□ 0.45
SLC48A1-201ENST00000442218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.88■□□□□ 0.456e-9■■■□□ 15.3
SLC48A1-201ENST00000442218 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
SLC48A1-201ENST00000442218 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
SLC48A1-201ENST00000442218 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
SLC48A1-201ENST00000442218 NUP155O75694 1391 aa17.85■□□□□ 0.45
SLC48A1-201ENST00000442218 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
SLC48A1-201ENST00000442218 CROCC2H7BZ55 1655 aa17.84■□□□□ 0.45
SLC48A1-201ENST00000442218 SAMD9LQ8IVG5 1584 aa17.84■□□□□ 0.45
SLC48A1-201ENST00000442218 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
SLC48A1-201ENST00000442218 PZPP20742 1482 aa17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 RPRD2Q5VT52 1461 aaKnown RBP17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 DCAF11Q8TEB1 546 aa17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
SLC48A1-201ENST00000442218 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 CARD11Q9BXL7 1154 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 USP47Q96K76 1375 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 ADGBQ8N7X0 1667 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 C9orf84Q5VXU9 1444 aa17.81■□□□□ 0.44
SLC48A1-201ENST00000442218 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
SLC48A1-201ENST00000442218 ADGRL2O95490 1459 aa17.8■□□□□ 0.44
SLC48A1-201ENST00000442218 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
SLC48A1-201ENST00000442218 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
SLC48A1-201ENST00000442218 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
SLC48A1-201ENST00000442218 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
SLC48A1-201ENST00000442218 NPM2Q86SE8 214 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms