RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 DAPK1P53355 1430 aa27.8■■■□□ 2.04
POLR1E-203ENST00000442009 GCC2Q8IWJ2 1684 aa27.75■■■□□ 2.03
POLR1E-203ENST00000442009 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
POLR1E-203ENST00000442009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.031e-9■■■■□ 19.9
POLR1E-203ENST00000442009 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
POLR1E-203ENST00000442009 PREX2Q70Z35 1606 aa27.73■■■□□ 2.03
POLR1E-203ENST00000442009 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
POLR1E-203ENST00000442009 TTC37Q6PGP7 1564 aa27.71■■■□□ 2.03
POLR1E-203ENST00000442009 CHIC2Q9UKJ5 165 aa27.7■■■□□ 2.02
POLR1E-203ENST00000442009 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
POLR1E-203ENST00000442009 RRP7BPQ9NSQ0 103 aa27.66■■■□□ 2.02
POLR1E-203ENST00000442009 ZNF777Q9ULD5 760 aaPredicted RBP27.65■■■□□ 2.02
POLR1E-203ENST00000442009 MYO5CQ9NQX4 1742 aa27.63■■■□□ 2.01
POLR1E-203ENST00000442009 ADGRL2O95490 1459 aa27.62■■■□□ 2.01
POLR1E-203ENST00000442009 SAMD9LQ8IVG5 1584 aa27.62■■■□□ 2.01
POLR1E-203ENST00000442009 ARHGEF5Q12774 1597 aa27.62■■■□□ 2.01
POLR1E-203ENST00000442009 KDM6BO15054 1643 aa27.61■■■□□ 2.01
POLR1E-203ENST00000442009 MBD5Q9P267 1494 aa27.61■■■□□ 2.01
POLR1E-203ENST00000442009 ADGBQ8N7X0 1667 aa27.61■■■□□ 2.01
POLR1E-203ENST00000442009 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
POLR1E-203ENST00000442009 WDR7Q9Y4E6 1490 aa27.59■■■□□ 2.01
POLR1E-203ENST00000442009 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
POLR1E-203ENST00000442009 SHANK2Q9UPX8 1470 aa27.59■■■□□ 2.01
POLR1E-203ENST00000442009 PLCH2O75038 1416 aa27.57■■■□□ 2
POLR1E-203ENST00000442009 ARHGAP5Q13017 1502 aa27.55■■■□□ 2
POLR1E-203ENST00000442009 ACIN1Q9UKV3 1341 aaKnown RBP27.52■■■□□ 2
POLR1E-203ENST00000442009 ARAP3Q8WWN8 1544 aa27.52■■■□□ 2
POLR1E-203ENST00000442009 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
POLR1E-203ENST00000442009 RSPH4AQ5TD94 716 aa27.51■■□□□ 1.99
POLR1E-203ENST00000442009 ASXL2Q76L83 1435 aa27.51■■□□□ 1.99
POLR1E-203ENST00000442009 HNRNPMP52272 730 aaKnown RBP eCLIP27.51■■□□□ 1.99
POLR1E-203ENST00000442009 C9orf84Q5VXU9 1444 aa27.49■■□□□ 1.99
POLR1E-203ENST00000442009 PLEKHH2Q8IVE3 1493 aa27.49■■□□□ 1.99
POLR1E-203ENST00000442009 ANKRD30AQ9BXX3 1397 aa27.49■■□□□ 1.99
POLR1E-203ENST00000442009 ABCA9Q8IUA7 1624 aa27.48■■□□□ 1.99
POLR1E-203ENST00000442009 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
POLR1E-203ENST00000442009 SYCP2Q9BX26 1530 aa27.46■■□□□ 1.99
POLR1E-203ENST00000442009 DENND4BO75064 1496 aaPredicted RBP27.45■■□□□ 1.99
POLR1E-203ENST00000442009 TSPY4P0CV99 314 aa27.44■■□□□ 1.98
POLR1E-203ENST00000442009 TSPY10P0CW01 314 aa27.44■■□□□ 1.98
POLR1E-203ENST00000442009 EFCAB2Q5VUJ9 269 aa27.44■■□□□ 1.98
POLR1E-203ENST00000442009 MAST1Q9Y2H9 1570 aa27.43■■□□□ 1.98
POLR1E-203ENST00000442009 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
POLR1E-203ENST00000442009 NPM1P06748 294 aaKnown RBP eCLIP27.42■■□□□ 1.98
POLR1E-203ENST00000442009 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
POLR1E-203ENST00000442009 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
POLR1E-203ENST00000442009 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
POLR1E-203ENST00000442009 SIN3AQ96ST3 1273 aa27.39■■□□□ 1.98
POLR1E-203ENST00000442009 ABCC1P33527 1531 aa27.39■■□□□ 1.97
POLR1E-203ENST00000442009 TIMELESSQ9UNS1 1208 aa27.37■■□□□ 1.97
POLR1E-203ENST00000442009 ANKRD50Q9ULJ7 1429 aa27.37■■□□□ 1.97
POLR1E-203ENST00000442009 TRIM52Q96A61 297 aa27.37■■□□□ 1.97
POLR1E-203ENST00000442009 MPHOSPH9Q99550 1183 aa27.36■■□□□ 1.97
POLR1E-203ENST00000442009 KIF15Q9NS87 1388 aa27.33■■□□□ 1.96
POLR1E-203ENST00000442009 PLXNC1O60486 1568 aa27.3■■□□□ 1.96
POLR1E-203ENST00000442009 PZPP20742 1482 aa27.3■■□□□ 1.96
POLR1E-203ENST00000442009 FANCAO15360 1455 aa27.29■■□□□ 1.96
POLR1E-203ENST00000442009 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
POLR1E-203ENST00000442009 NEUROD1Q13562 356 aa27.27■■□□□ 1.96
POLR1E-203ENST00000442009 CYB5RLQ6IPT4 315 aa27.27■■□□□ 1.96
POLR1E-203ENST00000442009 ZNF316A6NFI3 1004 aaPredicted RBP27.24■■□□□ 1.95
POLR1E-203ENST00000442009 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
POLR1E-203ENST00000442009 ANKRD30BQ9BXX2 1392 aa27.21■■□□□ 1.95
POLR1E-203ENST00000442009 RTEL1-TNFRSF6BF6WH68 1400 aa27.2■■□□□ 1.95
POLR1E-203ENST00000442009 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
POLR1E-203ENST00000442009 CD109Q6YHK3 1445 aa27.19■■□□□ 1.94
POLR1E-203ENST00000442009 DUOX2Q9NRD8 1548 aa27.17■■□□□ 1.94
POLR1E-203ENST00000442009 ADGRL1O94910 1474 aa27.17■■□□□ 1.94
POLR1E-203ENST00000442009 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
POLR1E-203ENST00000442009 AFAP1Q8N556 730 aa27.16■■□□□ 1.94
POLR1E-203ENST00000442009 ZFYVE16Q7Z3T8 1539 aa27.14■■□□□ 1.94
POLR1E-203ENST00000442009 FOXD1Q16676 465 aa27.14■■□□□ 1.94
POLR1E-203ENST00000442009 SCAPERQ9BY12 1400 aa27.14■■□□□ 1.94
POLR1E-203ENST00000442009 NUP155O75694 1391 aa27.14■■□□□ 1.93
POLR1E-203ENST00000442009 CFAP74Q9C0B2 1584 aa27.13■■□□□ 1.93
POLR1E-203ENST00000442009 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
POLR1E-203ENST00000442009 UNC13BO14795 1591 aa27.12■■□□□ 1.93
POLR1E-203ENST00000442009 INO80Q9ULG1 1556 aaPredicted RBP27.12■■□□□ 1.93
POLR1E-203ENST00000442009 TONSLQ96HA7 1378 aa27.12■■□□□ 1.93
POLR1E-203ENST00000442009 ERBINQ96RT1 1412 aa27.11■■□□□ 1.93
POLR1E-203ENST00000442009 GLI2P10070 1586 aa27.11■■□□□ 1.93
POLR1E-203ENST00000442009 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
POLR1E-203ENST00000442009 MAP3K4Q9Y6R4 1608 aa27.08■■□□□ 1.93
POLR1E-203ENST00000442009 ATP7AQ04656 1500 aa27.07■■□□□ 1.92
POLR1E-203ENST00000442009 PKD2Q13563 968 aa27.06■■□□□ 1.92
POLR1E-203ENST00000442009 MAGI2Q86UL8 1455 aa27.06■■□□□ 1.92
POLR1E-203ENST00000442009 NEO1Q92859 1461 aa27.05■■□□□ 1.92
POLR1E-203ENST00000442009 FAM135AQ9P2D6 1515 aa27.04■■□□□ 1.92
POLR1E-203ENST00000442009 ZNF518AQ6AHZ1 1483 aa27.02■■□□□ 1.92
POLR1E-203ENST00000442009 IQGAP3Q86VI3 1631 aa27.01■■□□□ 1.91
POLR1E-203ENST00000442009 KDM5CP41229 1560 aa27.01■■□□□ 1.91
POLR1E-203ENST00000442009 KIDINS220Q9ULH0 1771 aa27■■□□□ 1.91
POLR1E-203ENST00000442009 POGZQ7Z3K3 1410 aa26.99■■□□□ 1.91
POLR1E-203ENST00000442009 DIP2BQ9P265 1576 aa26.98■■□□□ 1.91
POLR1E-203ENST00000442009 DIEXFQ68CQ4 756 aaKnown RBP26.97■■□□□ 1.91
POLR1E-203ENST00000442009 TEX14Q8IWB6 1497 aa26.96■■□□□ 1.91
POLR1E-203ENST00000442009 MLH3Q9UHC1 1453 aa26.95■■□□□ 1.9
POLR1E-203ENST00000442009 DEPDC5O75140 1603 aa26.94■■□□□ 1.9
POLR1E-203ENST00000442009 L3MBTL2Q969R5 705 aa26.94■■□□□ 1.9
POLR1E-203ENST00000442009 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms