RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
EPHA4-208ENST00000441679 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
EPHA4-208ENST00000441679 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
EPHA4-208ENST00000441679 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
EPHA4-208ENST00000441679 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
EPHA4-208ENST00000441679 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
EPHA4-208ENST00000441679 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
EPHA4-208ENST00000441679 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
EPHA4-208ENST00000441679 GABBR2O75899 941 aa12.86□□□□□ -0.35
EPHA4-208ENST00000441679 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
EPHA4-208ENST00000441679 HMGXB3Q12766 1538 aa12.86□□□□□ -0.35
EPHA4-208ENST00000441679 MFSD10Q14728 455 aa12.84□□□□□ -0.35
EPHA4-208ENST00000441679 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
EPHA4-208ENST00000441679 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
EPHA4-208ENST00000441679 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
EPHA4-208ENST00000441679 WIZO95785 1651 aa12.83□□□□□ -0.36
EPHA4-208ENST00000441679 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
EPHA4-208ENST00000441679 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
EPHA4-208ENST00000441679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
EPHA4-208ENST00000441679 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
EPHA4-208ENST00000441679 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
EPHA4-208ENST00000441679 IER5LQ5T953 404 aa12.72□□□□□ -0.37
EPHA4-208ENST00000441679 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
EPHA4-208ENST00000441679 ARIH1Q9Y4X5 557 aaPredicted RBP12.72□□□□□ -0.37
EPHA4-208ENST00000441679 SEMA3EO15041 775 aa12.71□□□□□ -0.37
EPHA4-208ENST00000441679 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
EPHA4-208ENST00000441679 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
EPHA4-208ENST00000441679 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
EPHA4-208ENST00000441679 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
EPHA4-208ENST00000441679 ASTLQ6HA08 431 aaPredicted RBP12.7□□□□□ -0.38
EPHA4-208ENST00000441679 DPY19L2Q6NUT2 758 aa12.7□□□□□ -0.38
EPHA4-208ENST00000441679 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
EPHA4-208ENST00000441679 G3V3G9 751 aa12.69□□□□□ -0.38
EPHA4-208ENST00000441679 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
EPHA4-208ENST00000441679 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
EPHA4-208ENST00000441679 IRX5P78411 483 aaPredicted RBP12.67□□□□□ -0.38
EPHA4-208ENST00000441679 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
EPHA4-208ENST00000441679 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
EPHA4-208ENST00000441679 PLCG2P16885 1265 aa12.64□□□□□ -0.39
EPHA4-208ENST00000441679 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
EPHA4-208ENST00000441679 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
EPHA4-208ENST00000441679 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
EPHA4-208ENST00000441679 DSG2Q14126 1118 aa12.6□□□□□ -0.39
EPHA4-208ENST00000441679 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
EPHA4-208ENST00000441679 FOXK1P85037 733 aa12.59□□□□□ -0.39
EPHA4-208ENST00000441679 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
EPHA4-208ENST00000441679 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
EPHA4-208ENST00000441679 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
EPHA4-208ENST00000441679 SEC24BO95487 1268 aa12.56□□□□□ -0.4
EPHA4-208ENST00000441679 CFTRP13569 1480 aa12.55□□□□□ -0.4
EPHA4-208ENST00000441679 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
EPHA4-208ENST00000441679 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
EPHA4-208ENST00000441679 DPYSL4O14531 572 aa12.54□□□□□ -0.4
EPHA4-208ENST00000441679 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
EPHA4-208ENST00000441679 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
EPHA4-208ENST00000441679 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
EPHA4-208ENST00000441679 EMILIN3Q9NT22 766 aa12.53□□□□□ -0.4
EPHA4-208ENST00000441679 KIF3CO14782 793 aa12.51□□□□□ -0.41
EPHA4-208ENST00000441679 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
EPHA4-208ENST00000441679 PDIA6Q15084 440 aa12.5□□□□□ -0.41
EPHA4-208ENST00000441679 MLLT3P42568 568 aaPredicted RBP12.48□□□□□ -0.41
EPHA4-208ENST00000441679 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
EPHA4-208ENST00000441679 ZMYND10O75800 440 aa12.45□□□□□ -0.42
EPHA4-208ENST00000441679 C7P10643 843 aa12.45□□□□□ -0.42
EPHA4-208ENST00000441679 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
EPHA4-208ENST00000441679 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
EPHA4-208ENST00000441679 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
EPHA4-208ENST00000441679 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
EPHA4-208ENST00000441679 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
EPHA4-208ENST00000441679 SLC24A3Q9HC58 644 aa12.43□□□□□ -0.42
EPHA4-208ENST00000441679 TMEM132AQ24JP5 1023 aa12.41□□□□□ -0.42
EPHA4-208ENST00000441679 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.42
EPHA4-208ENST00000441679 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
EPHA4-208ENST00000441679 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
EPHA4-208ENST00000441679 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
EPHA4-208ENST00000441679 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
EPHA4-208ENST00000441679 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
EPHA4-208ENST00000441679 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
EPHA4-208ENST00000441679 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
EPHA4-208ENST00000441679 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
EPHA4-208ENST00000441679 NESP48681 1621 aa12.36□□□□□ -0.43
EPHA4-208ENST00000441679 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
EPHA4-208ENST00000441679 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
EPHA4-208ENST00000441679 TBC1D12O60347 775 aa12.35□□□□□ -0.43
EPHA4-208ENST00000441679 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
EPHA4-208ENST00000441679 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
EPHA4-208ENST00000441679 GRXCR2A6NFK2 248 aa12.34□□□□□ -0.43
EPHA4-208ENST00000441679 WRNQ14191 1432 aaPredicted RBP eCLIP12.34□□□□□ -0.43
EPHA4-208ENST00000441679 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
EPHA4-208ENST00000441679 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
EPHA4-208ENST00000441679 AK7Q96M32 723 aa12.31□□□□□ -0.44
EPHA4-208ENST00000441679 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
EPHA4-208ENST00000441679 PTGER2P43116 358 aa12.28□□□□□ -0.44
EPHA4-208ENST00000441679 EVI5O60447 810 aa12.27□□□□□ -0.45
EPHA4-208ENST00000441679 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
EPHA4-208ENST00000441679 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
EPHA4-208ENST00000441679 PTCD2Q8WV60 388 aaKnown RBP12.26□□□□□ -0.45
EPHA4-208ENST00000441679 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.26□□□□□ -0.45
EPHA4-208ENST00000441679 LHX8Q68G74 356 aa12.25□□□□□ -0.45
EPHA4-208ENST00000441679 DDX12PQ92771 950 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms