RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 NEUROD2Q15784 382 aa20.2■□□□□ 0.83
SCAP-207ENST00000441517 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
SCAP-207ENST00000441517 NAIPQ13075 1403 aa20.19■□□□□ 0.82
SCAP-207ENST00000441517 DAXXQ9UER7 740 aaPredicted RBP20.18■□□□□ 0.82
SCAP-207ENST00000441517 RTL5Q5HYW3 569 aaPredicted RBP20.17■□□□□ 0.82
SCAP-207ENST00000441517 PLIN1O60240 522 aa20.16■□□□□ 0.82
SCAP-207ENST00000441517 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
SCAP-207ENST00000441517 PRG4Q92954 1404 aaPredicted RBP20.13■□□□□ 0.81
SCAP-207ENST00000441517 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
SCAP-207ENST00000441517 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
SCAP-207ENST00000441517 NUTM2DQ5VT03 806 aaPredicted RBP20.1■□□□□ 0.81
SCAP-207ENST00000441517 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
SCAP-207ENST00000441517 URB2Q14146 1524 aaKnown RBP20.1■□□□□ 0.81
SCAP-207ENST00000441517 CCDC7Q96M83 1385 aa20.1■□□□□ 0.81
SCAP-207ENST00000441517 CANXP27824 592 aaKnown RBP20.09■□□□□ 0.81
SCAP-207ENST00000441517 NBPF1Q3BBV0 1214 aa20.09■□□□□ 0.81
SCAP-207ENST00000441517 HFM1A2PYH4 1435 aa20.08■□□□□ 0.81
SCAP-207ENST00000441517 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.8
SCAP-207ENST00000441517 SKAP1Q86WV1 359 aa20.07■□□□□ 0.8
SCAP-207ENST00000441517 USP47Q96K76 1375 aa20.07■□□□□ 0.8
SCAP-207ENST00000441517 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
SCAP-207ENST00000441517 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
SCAP-207ENST00000441517 ROCK2O75116 1388 aaKnown RBP20.05■□□□□ 0.8
SCAP-207ENST00000441517 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
SCAP-207ENST00000441517 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
SCAP-207ENST00000441517 RGS3P49796 1198 aa20.02■□□□□ 0.8
SCAP-207ENST00000441517 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
SCAP-207ENST00000441517 CDCA7LQ96GN5 454 aa20.02■□□□□ 0.8
SCAP-207ENST00000441517 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
SCAP-207ENST00000441517 ANKRD30AQ9BXX3 1397 aa20■□□□□ 0.79
SCAP-207ENST00000441517 AKNAQ7Z591 1439 aa20■□□□□ 0.79
SCAP-207ENST00000441517 EXOC6Q8TAG9 804 aa20■□□□□ 0.79
SCAP-207ENST00000441517 ARXQ96QS3 562 aa20■□□□□ 0.79
SCAP-207ENST00000441517 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
SCAP-207ENST00000441517 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
SCAP-207ENST00000441517 MSH5O43196 834 aa19.99■□□□□ 0.79
SCAP-207ENST00000441517 PANK3Q9H999 370 aa19.98■□□□□ 0.79
SCAP-207ENST00000441517 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
SCAP-207ENST00000441517 RTN4Q9NQC3 1192 aaKnown RBP19.94■□□□□ 0.78
SCAP-207ENST00000441517 GGT6Q6P531 493 aa19.94■□□□□ 0.78
SCAP-207ENST00000441517 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
SCAP-207ENST00000441517 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
SCAP-207ENST00000441517 PLB1Q6P1J6 1458 aa19.93■□□□□ 0.78
SCAP-207ENST00000441517 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
SCAP-207ENST00000441517 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
SCAP-207ENST00000441517 ZBED9Q6R2W3 1325 aa19.91■□□□□ 0.78
SCAP-207ENST00000441517 SLC4A3P48751 1232 aa19.91■□□□□ 0.78
SCAP-207ENST00000441517 CARMIL2Q6F5E8 1435 aa19.9■□□□□ 0.78
SCAP-207ENST00000441517 AFAP1Q8N556 730 aa19.9■□□□□ 0.78
SCAP-207ENST00000441517 KIF3BO15066 747 aa19.89■□□□□ 0.77
SCAP-207ENST00000441517 NOP58Q9Y2X3 529 aaKnown RBP19.89■□□□□ 0.77
SCAP-207ENST00000441517 ANKRD50Q9ULJ7 1429 aa19.88■□□□□ 0.77
SCAP-207ENST00000441517 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
SCAP-207ENST00000441517 TMF1P82094 1093 aa19.88■□□□□ 0.77
SCAP-207ENST00000441517 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
SCAP-207ENST00000441517 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
SCAP-207ENST00000441517 RRP7AQ9Y3A4 280 aaKnown RBP19.86■□□□□ 0.77
SCAP-207ENST00000441517 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
SCAP-207ENST00000441517 ABCC5O15440 1437 aa19.86■□□□□ 0.77
SCAP-207ENST00000441517 DAPK1P53355 1430 aa19.86■□□□□ 0.77
SCAP-207ENST00000441517 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
SCAP-207ENST00000441517 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
SCAP-207ENST00000441517 THOC2Q8NI27 1593 aaKnown RBP19.85■□□□□ 0.77
SCAP-207ENST00000441517 SNAPC4Q5SXM2 1469 aa19.85■□□□□ 0.77
SCAP-207ENST00000441517 STK26Q9P289 416 aa19.85■□□□□ 0.77
SCAP-207ENST00000441517 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
SCAP-207ENST00000441517 PTPRGP23470 1445 aa19.84■□□□□ 0.77
SCAP-207ENST00000441517 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
SCAP-207ENST00000441517 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
SCAP-207ENST00000441517 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
SCAP-207ENST00000441517 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCAP-207ENST00000441517 DEKP35659 375 aaKnown RBP19.81■□□□□ 0.76
SCAP-207ENST00000441517 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
SCAP-207ENST00000441517 NLRP13Q86W25 1043 aa19.8■□□□□ 0.76
SCAP-207ENST00000441517 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
SCAP-207ENST00000441517 TRAK1Q9UPV9 953 aa19.8■□□□□ 0.76
SCAP-207ENST00000441517 MAP3K1Q13233 1512 aa19.79■□□□□ 0.76
SCAP-207ENST00000441517 SLC24A1O60721 1099 aa19.78■□□□□ 0.76
SCAP-207ENST00000441517 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
SCAP-207ENST00000441517 CRBNQ96SW2 442 aa19.78■□□□□ 0.76
SCAP-207ENST00000441517 CLUAP1Q96AJ1 413 aa19.77■□□□□ 0.76
SCAP-207ENST00000441517 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
SCAP-207ENST00000441517 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.75
SCAP-207ENST00000441517 CCDC144AA2RUR9 1427 aa19.77■□□□□ 0.75
SCAP-207ENST00000441517 MYBBP1AQ9BQG0 1328 aaKnown RBP19.77■□□□□ 0.75
SCAP-207ENST00000441517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.76■□□□□ 0.751e-9■■■■■ 28.3
SCAP-207ENST00000441517 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
SCAP-207ENST00000441517 NEFMP07197 916 aa19.75■□□□□ 0.75
SCAP-207ENST00000441517 EFCAB2Q5VUJ9 269 aa19.75■□□□□ 0.75
SCAP-207ENST00000441517 ARHGEF11O15085 1522 aa19.75■□□□□ 0.75
SCAP-207ENST00000441517 RALBP1Q15311 655 aa19.74■□□□□ 0.75
SCAP-207ENST00000441517 RRP1P56182 461 aaKnown RBP19.74■□□□□ 0.75
SCAP-207ENST00000441517 MLECQ14165 292 aa19.74■□□□□ 0.75
SCAP-207ENST00000441517 APAF1O14727 1248 aa19.73■□□□□ 0.75
SCAP-207ENST00000441517 U2SURPO15042 1029 aaKnown RBP19.73■□□□□ 0.75
SCAP-207ENST00000441517 SPRYD3Q8NCJ5 442 aa19.73■□□□□ 0.75
SCAP-207ENST00000441517 SPAG9O60271 1321 aaKnown RBP19.72■□□□□ 0.75
SCAP-207ENST00000441517 TMEM132EQ6IEE7 984 aa19.72■□□□□ 0.75
SCAP-207ENST00000441517 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
SCAP-207ENST00000441517 KDM6BO15054 1643 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms