RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 ABCC5O15440 1437 aa25.25■■□□□ 1.63
TMEM39B-203ENST00000441402 PREX2Q70Z35 1606 aa25.24■■□□□ 1.63
TMEM39B-203ENST00000441402 NAIPQ13075 1403 aa25.23■■□□□ 1.63
TMEM39B-203ENST00000441402 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
TMEM39B-203ENST00000441402 CDC42BPBQ9Y5S2 1711 aa25.21■■□□□ 1.63
TMEM39B-203ENST00000441402 WDR7Q9Y4E6 1490 aa25.2■■□□□ 1.62
TMEM39B-203ENST00000441402 TTC37Q6PGP7 1564 aa25.2■■□□□ 1.62
TMEM39B-203ENST00000441402 KCNH8Q96L42 1107 aa25.17■■□□□ 1.62
TMEM39B-203ENST00000441402 NPM1P06748 294 aaKnown RBP eCLIP25.17■■□□□ 1.62
TMEM39B-203ENST00000441402 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
TMEM39B-203ENST00000441402 MYO5CQ9NQX4 1742 aa25.16■■□□□ 1.62
TMEM39B-203ENST00000441402 PLCH2O75038 1416 aa25.16■■□□□ 1.62
TMEM39B-203ENST00000441402 GCC2Q8IWJ2 1684 aa25.16■■□□□ 1.62
TMEM39B-203ENST00000441402 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
TMEM39B-203ENST00000441402 RSPH4AQ5TD94 716 aa25.14■■□□□ 1.62
TMEM39B-203ENST00000441402 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.62
TMEM39B-203ENST00000441402 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.61
TMEM39B-203ENST00000441402 ASXL2Q76L83 1435 aa25.13■■□□□ 1.61
TMEM39B-203ENST00000441402 ARAP3Q8WWN8 1544 aa25.12■■□□□ 1.61
TMEM39B-203ENST00000441402 SAMD9LQ8IVG5 1584 aa25.12■■□□□ 1.61
TMEM39B-203ENST00000441402 ADGRL2O95490 1459 aa25.11■■□□□ 1.61
TMEM39B-203ENST00000441402 CROCC2H7BZ55 1655 aa25.11■■□□□ 1.61
TMEM39B-203ENST00000441402 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
TMEM39B-203ENST00000441402 SHANK2Q9UPX8 1470 aa25.1■■□□□ 1.61
TMEM39B-203ENST00000441402 RRP7BPQ9NSQ0 103 aa25.1■■□□□ 1.61
TMEM39B-203ENST00000441402 ARHGAP5Q13017 1502 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 KIAA1107Q9UPP5 1409 aa25.09■■□□□ 1.61
TMEM39B-203ENST00000441402 NCOA1Q15788 1441 aa25.07■■□□□ 1.6
TMEM39B-203ENST00000441402 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
TMEM39B-203ENST00000441402 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
TMEM39B-203ENST00000441402 EFCAB2Q5VUJ9 269 aa25.07■■□□□ 1.6
TMEM39B-203ENST00000441402 HNRNPMP52272 730 aaKnown RBP eCLIP25.03■■□□□ 1.6
TMEM39B-203ENST00000441402 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
TMEM39B-203ENST00000441402 TSPY4P0CV99 314 aa25.02■■□□□ 1.6
TMEM39B-203ENST00000441402 TSPY10P0CW01 314 aa25.02■■□□□ 1.6
TMEM39B-203ENST00000441402 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
TMEM39B-203ENST00000441402 MAPKBP1O60336 1514 aa25.02■■□□□ 1.6
TMEM39B-203ENST00000441402 C9orf84Q5VXU9 1444 aa25■■□□□ 1.59
TMEM39B-203ENST00000441402 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
TMEM39B-203ENST00000441402 SYCP2Q9BX26 1530 aa24.98■■□□□ 1.59
TMEM39B-203ENST00000441402 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
TMEM39B-203ENST00000441402 KDM6BO15054 1643 aa24.97■■□□□ 1.59
TMEM39B-203ENST00000441402 ABCC1P33527 1531 aa24.94■■□□□ 1.58
TMEM39B-203ENST00000441402 ARHGEF12Q9NZN5 1544 aa24.93■■□□□ 1.58
TMEM39B-203ENST00000441402 FANCAO15360 1455 aa24.9■■□□□ 1.58
TMEM39B-203ENST00000441402 ANKRD50Q9ULJ7 1429 aa24.88■■□□□ 1.57
TMEM39B-203ENST00000441402 TRIM52Q96A61 297 aa24.86■■□□□ 1.57
TMEM39B-203ENST00000441402 CD109Q6YHK3 1445 aa24.85■■□□□ 1.57
TMEM39B-203ENST00000441402 TIMELESSQ9UNS1 1208 aa24.85■■□□□ 1.57
TMEM39B-203ENST00000441402 KIF15Q9NS87 1388 aa24.85■■□□□ 1.57
TMEM39B-203ENST00000441402 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
TMEM39B-203ENST00000441402 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
TMEM39B-203ENST00000441402 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
TMEM39B-203ENST00000441402 TRAPPC8Q9Y2L5 1435 aa24.83■■□□□ 1.57
TMEM39B-203ENST00000441402 DENND4BO75064 1496 aaPredicted RBP24.82■■□□□ 1.56
TMEM39B-203ENST00000441402 GLI2P10070 1586 aa24.81■■□□□ 1.56
TMEM39B-203ENST00000441402 CFAP74Q9C0B2 1584 aa24.8■■□□□ 1.56
TMEM39B-203ENST00000441402 ADGRL1O94910 1474 aa24.78■■□□□ 1.56
TMEM39B-203ENST00000441402 SCAPERQ9BY12 1400 aa24.77■■□□□ 1.56
TMEM39B-203ENST00000441402 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
TMEM39B-203ENST00000441402 PZPP20742 1482 aa24.75■■□□□ 1.55
TMEM39B-203ENST00000441402 DUOX2Q9NRD8 1548 aa24.74■■□□□ 1.55
TMEM39B-203ENST00000441402 AFAP1Q8N556 730 aa24.74■■□□□ 1.55
TMEM39B-203ENST00000441402 SPAG9O60271 1321 aaKnown RBP24.74■■□□□ 1.55
TMEM39B-203ENST00000441402 NEO1Q92859 1461 aa24.74■■□□□ 1.55
TMEM39B-203ENST00000441402 KDM5DQ9BY66 1539 aa24.74■■□□□ 1.55
TMEM39B-203ENST00000441402 MAP3K4Q9Y6R4 1608 aa24.73■■□□□ 1.55
TMEM39B-203ENST00000441402 SLC4A1APQ9BWU0 796 aaKnown RBP24.71■■□□□ 1.55
TMEM39B-203ENST00000441402 ERBINQ96RT1 1412 aa24.7■■□□□ 1.54
TMEM39B-203ENST00000441402 ZFYVE16Q7Z3T8 1539 aa24.7■■□□□ 1.54
TMEM39B-203ENST00000441402 INO80Q9ULG1 1556 aaPredicted RBP24.68■■□□□ 1.54
TMEM39B-203ENST00000441402 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
TMEM39B-203ENST00000441402 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
TMEM39B-203ENST00000441402 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
TMEM39B-203ENST00000441402 NUP155O75694 1391 aa24.67■■□□□ 1.54
TMEM39B-203ENST00000441402 ANKRD30BQ9BXX2 1392 aa24.67■■□□□ 1.54
TMEM39B-203ENST00000441402 ATP7AQ04656 1500 aa24.65■■□□□ 1.54
TMEM39B-203ENST00000441402 UNC13BO14795 1591 aa24.64■■□□□ 1.54
TMEM39B-203ENST00000441402 POGZQ7Z3K3 1410 aa24.63■■□□□ 1.53
TMEM39B-203ENST00000441402 KDM5CP41229 1560 aa24.62■■□□□ 1.53
TMEM39B-203ENST00000441402 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
TMEM39B-203ENST00000441402 MLH3Q9UHC1 1453 aa24.6■■□□□ 1.53
TMEM39B-203ENST00000441402 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
TMEM39B-203ENST00000441402 PPP1R15AO75807 674 aaPredicted RBP24.59■■□□□ 1.53
TMEM39B-203ENST00000441402 KIDINS220Q9ULH0 1771 aa24.58■■□□□ 1.53
TMEM39B-203ENST00000441402 PKD2Q13563 968 aa24.58■■□□□ 1.53
TMEM39B-203ENST00000441402 TONSLQ96HA7 1378 aa24.58■■□□□ 1.52
TMEM39B-203ENST00000441402 FOXD1Q16676 465 aa24.57■■□□□ 1.52
TMEM39B-203ENST00000441402 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
TMEM39B-203ENST00000441402 DHX29Q7Z478 1369 aaKnown RBP24.56■■□□□ 1.52
TMEM39B-203ENST00000441402 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
TMEM39B-203ENST00000441402 RPRD2Q5VT52 1461 aaKnown RBP24.55■■□□□ 1.52
TMEM39B-203ENST00000441402 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
TMEM39B-203ENST00000441402 EIF2AK4Q9P2K8 1649 aaKnown RBP24.52■■□□□ 1.52
TMEM39B-203ENST00000441402 HECW2Q9P2P5 1572 aa24.51■■□□□ 1.51
TMEM39B-203ENST00000441402 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms