RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
SP4-203ENST00000440636 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
SP4-203ENST00000440636 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
SP4-203ENST00000440636 MLECQ14165 292 aa21.73■■□□□ 1.07
SP4-203ENST00000440636 MYO5CQ9NQX4 1742 aa21.72■■□□□ 1.07
SP4-203ENST00000440636 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
SP4-203ENST00000440636 ATP10AO60312 1499 aa21.71■■□□□ 1.07
SP4-203ENST00000440636 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
SP4-203ENST00000440636 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
SP4-203ENST00000440636 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
SP4-203ENST00000440636 KIF14Q15058 1648 aa21.7■■□□□ 1.06
SP4-203ENST00000440636 ARHGEF12Q9NZN5 1544 aa21.7■■□□□ 1.06
SP4-203ENST00000440636 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
SP4-203ENST00000440636 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
SP4-203ENST00000440636 TROQ12816 1431 aaPredicted RBP21.67■■□□□ 1.06
SP4-203ENST00000440636 ZNF518AQ6AHZ1 1483 aa21.65■■□□□ 1.06
SP4-203ENST00000440636 KDM5CP41229 1560 aa21.64■■□□□ 1.05
SP4-203ENST00000440636 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
SP4-203ENST00000440636 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
SP4-203ENST00000440636 AFAP1Q8N556 730 aa21.61■■□□□ 1.05
SP4-203ENST00000440636 CLIP1P30622 1438 aa21.61■■□□□ 1.05
SP4-203ENST00000440636 PREX1Q8TCU6 1659 aa21.59■■□□□ 1.05
SP4-203ENST00000440636 CEBPAP49715 358 aaPredicted RBP21.58■■□□□ 1.05
SP4-203ENST00000440636 CHIC1Q5VXU3 224 aa21.58■■□□□ 1.05
SP4-203ENST00000440636 CERKQ8TCT0 537 aa21.57■■□□□ 1.04
SP4-203ENST00000440636 CDC42BPBQ9Y5S2 1711 aa21.57■■□□□ 1.04
SP4-203ENST00000440636 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
SP4-203ENST00000440636 REREQ9P2R6 1566 aa21.56■■□□□ 1.04
SP4-203ENST00000440636 MLH3Q9UHC1 1453 aa21.54■■□□□ 1.04
SP4-203ENST00000440636 ABCA6Q8N139 1617 aa21.53■■□□□ 1.04
SP4-203ENST00000440636 PREX2Q70Z35 1606 aa21.52■■□□□ 1.04
SP4-203ENST00000440636 CASKIN1Q8WXD9 1431 aa21.52■■□□□ 1.04
SP4-203ENST00000440636 ABCC1P33527 1531 aa21.51■■□□□ 1.03
SP4-203ENST00000440636 SETD1BQ9UPS6 1966 aaKnown RBP21.51■■□□□ 1.03
SP4-203ENST00000440636 MYT1LQ9UL68 1186 aa21.51■■□□□ 1.03
SP4-203ENST00000440636 TRAPPC8Q9Y2L5 1435 aa21.51■■□□□ 1.03
SP4-203ENST00000440636 CCDC18Q5T9S5 1454 aa21.51■■□□□ 1.03
SP4-203ENST00000440636 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
SP4-203ENST00000440636 UHRF1BP1Q6BDS2 1440 aa21.49■■□□□ 1.03
SP4-203ENST00000440636 AGLP35573 1532 aa21.49■■□□□ 1.03
SP4-203ENST00000440636 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
SP4-203ENST00000440636 C3P01024 1663 aa21.46■■□□□ 1.03
SP4-203ENST00000440636 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
SP4-203ENST00000440636 CDC42BPAQ5VT25 1732 aa21.44■■□□□ 1.02
SP4-203ENST00000440636 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
SP4-203ENST00000440636 FYCO1Q9BQS8 1478 aa21.4■■□□□ 1.02
SP4-203ENST00000440636 ESF1Q9H501 851 aaKnown RBP21.39■■□□□ 1.01
SP4-203ENST00000440636 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
SP4-203ENST00000440636 PTPRTO14522 1441 aa21.38■■□□□ 1.01
SP4-203ENST00000440636 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
SP4-203ENST00000440636 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
SP4-203ENST00000440636 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
SP4-203ENST00000440636 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
SP4-203ENST00000440636 NCOA1Q15788 1441 aa21.31■■□□□ 1
SP4-203ENST00000440636 MROH2AA6NES4 1674 aa21.31■■□□□ 1
SP4-203ENST00000440636 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
SP4-203ENST00000440636 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 1
SP4-203ENST00000440636 NPATQ14207 1427 aa21.29■■□□□ 1
SP4-203ENST00000440636 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
SP4-203ENST00000440636 LTBP4Q8N2S1 1624 aa21.29■■□□□ 1
SP4-203ENST00000440636 ZMYM3Q14202 1370 aa21.28■■□□□ 1
SP4-203ENST00000440636 ATP7AQ04656 1500 aa21.28■■□□□ 1
SP4-203ENST00000440636 SUPT6HQ7KZ85 1726 aaKnown RBP21.27■■□□□ 1
SP4-203ENST00000440636 PLXNC1O60486 1568 aa21.27■□□□□ 0.99
SP4-203ENST00000440636 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
SP4-203ENST00000440636 CFDP1Q9UEE9 299 aaPredicted RBP21.26■□□□□ 0.99
SP4-203ENST00000440636 PLEKHH2Q8IVE3 1493 aa21.26■□□□□ 0.99
SP4-203ENST00000440636 CAMSAP1Q5T5Y3 1602 aa21.25■□□□□ 0.99
SP4-203ENST00000440636 A2MP01023 1474 aa21.24■□□□□ 0.99
SP4-203ENST00000440636 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
SP4-203ENST00000440636 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
SP4-203ENST00000440636 IQSEC2Q5JU85 1478 aa21.21■□□□□ 0.99
SP4-203ENST00000440636 DISP3Q9P2K9 1392 aa21.21■□□□□ 0.99
SP4-203ENST00000440636 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
SP4-203ENST00000440636 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
SP4-203ENST00000440636 PTPRKQ15262 1439 aa21.18■□□□□ 0.98
SP4-203ENST00000440636 MYO3AQ8NEV4 1616 aa21.18■□□□□ 0.98
SP4-203ENST00000440636 ILDR2Q71H61 639 aa21.17■□□□□ 0.98
SP4-203ENST00000440636 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
SP4-203ENST00000440636 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
SP4-203ENST00000440636 GGT6Q6P531 493 aa21.16■□□□□ 0.98
SP4-203ENST00000440636 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
SP4-203ENST00000440636 CEP170BQ9Y4F5 1589 aaPredicted RBP21.15■□□□□ 0.98
SP4-203ENST00000440636 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
SP4-203ENST00000440636 MBD5Q9P267 1494 aa21.15■□□□□ 0.98
SP4-203ENST00000440636 ZNF644Q9H582 1327 aaPredicted RBP21.15■□□□□ 0.98
SP4-203ENST00000440636 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
SP4-203ENST00000440636 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
SP4-203ENST00000440636 EHBP1L1Q8N3D4 1523 aa21.13■□□□□ 0.97
SP4-203ENST00000440636 ZNF335Q9H4Z2 1342 aaPredicted RBP21.12■□□□□ 0.97
SP4-203ENST00000440636 PKD2Q13563 968 aa21.12■□□□□ 0.97
SP4-203ENST00000440636 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
SP4-203ENST00000440636 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
SP4-203ENST00000440636 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
SP4-203ENST00000440636 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.96
SP4-203ENST00000440636 SOCS7O14512 581 aa21.06■□□□□ 0.96
SP4-203ENST00000440636 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
SP4-203ENST00000440636 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
SP4-203ENST00000440636 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.96
SP4-203ENST00000440636 UBAP1LF5GYI3 381 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms