RNA–Protein interactions for RNA: ENST00000440633.1

LINC00545-201, long intergenic non-protein coding RNA 545, humanhuman

TSL 2 BASIC

Gene LINC00545, Length 411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00545-201ENST00000440633 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
LINC00545-201ENST00000440633 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
LINC00545-201ENST00000440633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
LINC00545-201ENST00000440633 MLECQ14165 292 aa16.8■□□□□ 0.28
LINC00545-201ENST00000440633 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
LINC00545-201ENST00000440633 MYO5CQ9NQX4 1742 aa16.79■□□□□ 0.28
LINC00545-201ENST00000440633 KDM5CP41229 1560 aa16.79■□□□□ 0.28
LINC00545-201ENST00000440633 C3P01024 1663 aa16.78■□□□□ 0.28
LINC00545-201ENST00000440633 ATP10AO60312 1499 aa16.78■□□□□ 0.28
LINC00545-201ENST00000440633 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.28
LINC00545-201ENST00000440633 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.27
LINC00545-201ENST00000440633 KIF14Q15058 1648 aa16.76■□□□□ 0.27
LINC00545-201ENST00000440633 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
LINC00545-201ENST00000440633 UHRF1BP1Q6BDS2 1440 aa16.76■□□□□ 0.27
LINC00545-201ENST00000440633 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
LINC00545-201ENST00000440633 PLCH2O75038 1416 aa16.74■□□□□ 0.27
LINC00545-201ENST00000440633 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
LINC00545-201ENST00000440633 PTPRTO14522 1441 aa16.72■□□□□ 0.27
LINC00545-201ENST00000440633 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
LINC00545-201ENST00000440633 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.27
LINC00545-201ENST00000440633 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
LINC00545-201ENST00000440633 ZNF518AQ6AHZ1 1483 aa16.71■□□□□ 0.27
LINC00545-201ENST00000440633 SETD1BQ9UPS6 1966 aaKnown RBP16.69■□□□□ 0.26
LINC00545-201ENST00000440633 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
LINC00545-201ENST00000440633 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
LINC00545-201ENST00000440633 LRRIQ1Q96JM4 1722 aa16.66■□□□□ 0.26
LINC00545-201ENST00000440633 DMRT2Q9Y5R5 561 aa16.64■□□□□ 0.25
LINC00545-201ENST00000440633 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
LINC00545-201ENST00000440633 CDC42BPBQ9Y5S2 1711 aa16.63■□□□□ 0.25
LINC00545-201ENST00000440633 ABCC1P33527 1531 aa16.63■□□□□ 0.25
LINC00545-201ENST00000440633 AGLP35573 1532 aa16.63■□□□□ 0.25
LINC00545-201ENST00000440633 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
LINC00545-201ENST00000440633 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
LINC00545-201ENST00000440633 PREX2Q70Z35 1606 aa16.62■□□□□ 0.25
LINC00545-201ENST00000440633 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
LINC00545-201ENST00000440633 ZNF142P52746 1687 aaPredicted RBP16.61■□□□□ 0.25
LINC00545-201ENST00000440633 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
LINC00545-201ENST00000440633 KIDINS220Q9ULH0 1771 aa16.6■□□□□ 0.25
LINC00545-201ENST00000440633 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
LINC00545-201ENST00000440633 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
LINC00545-201ENST00000440633 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
LINC00545-201ENST00000440633 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
LINC00545-201ENST00000440633 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
LINC00545-201ENST00000440633 MED1Q15648 1581 aaPredicted RBP16.55■□□□□ 0.24
LINC00545-201ENST00000440633 EEA1Q15075 1411 aa16.55■□□□□ 0.24
LINC00545-201ENST00000440633 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
LINC00545-201ENST00000440633 NPATQ14207 1427 aa16.53■□□□□ 0.24
LINC00545-201ENST00000440633 ZNF335Q9H4Z2 1342 aaPredicted RBP16.52■□□□□ 0.24
LINC00545-201ENST00000440633 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.23
LINC00545-201ENST00000440633 CNTLNQ9NXG0 1405 aa16.52■□□□□ 0.23
LINC00545-201ENST00000440633 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
LINC00545-201ENST00000440633 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
LINC00545-201ENST00000440633 SUPT6HQ7KZ85 1726 aaKnown RBP16.51■□□□□ 0.23
LINC00545-201ENST00000440633 TCOF1Q13428 1488 aaKnown RBP16.51■□□□□ 0.23
LINC00545-201ENST00000440633 FMN1Q68DA7 1419 aa16.51■□□□□ 0.23
LINC00545-201ENST00000440633 CLTCQ00610 1675 aaKnown RBP16.5■□□□□ 0.23
LINC00545-201ENST00000440633 PLXNC1O60486 1568 aa16.5■□□□□ 0.23
LINC00545-201ENST00000440633 SAMD9LQ8IVG5 1584 aa16.5■□□□□ 0.23
LINC00545-201ENST00000440633 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
LINC00545-201ENST00000440633 CLIP1P30622 1438 aa16.47■□□□□ 0.23
LINC00545-201ENST00000440633 INO80Q9ULG1 1556 aaPredicted RBP16.47■□□□□ 0.23
LINC00545-201ENST00000440633 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
LINC00545-201ENST00000440633 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
LINC00545-201ENST00000440633 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
LINC00545-201ENST00000440633 POLR1AO95602 1720 aaPredicted RBP16.44■□□□□ 0.22
LINC00545-201ENST00000440633 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
LINC00545-201ENST00000440633 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
LINC00545-201ENST00000440633 ATP7AQ04656 1500 aa16.41■□□□□ 0.22
LINC00545-201ENST00000440633 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
LINC00545-201ENST00000440633 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
LINC00545-201ENST00000440633 ZMYM3Q14202 1370 aa16.39■□□□□ 0.21
LINC00545-201ENST00000440633 DNMT1P26358 1616 aaKnown RBP16.39■□□□□ 0.21
LINC00545-201ENST00000440633 ESF1Q9H501 851 aaKnown RBP16.39■□□□□ 0.21
LINC00545-201ENST00000440633 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
LINC00545-201ENST00000440633 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
LINC00545-201ENST00000440633 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
LINC00545-201ENST00000440633 HSPA1LP34931 641 aa16.36■□□□□ 0.21
LINC00545-201ENST00000440633 CPS1P31327 1500 aa16.35■□□□□ 0.21
LINC00545-201ENST00000440633 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
LINC00545-201ENST00000440633 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
LINC00545-201ENST00000440633 PKD2Q13563 968 aa16.33■□□□□ 0.2
LINC00545-201ENST00000440633 A2MP01023 1474 aa16.33■□□□□ 0.2
LINC00545-201ENST00000440633 ADGBQ8N7X0 1667 aa16.32■□□□□ 0.2
LINC00545-201ENST00000440633 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
LINC00545-201ENST00000440633 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
LINC00545-201ENST00000440633 GPATCH8Q9UKJ3 1502 aaKnown RBP16.3■□□□□ 0.2
LINC00545-201ENST00000440633 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
LINC00545-201ENST00000440633 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
LINC00545-201ENST00000440633 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
LINC00545-201ENST00000440633 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
LINC00545-201ENST00000440633 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.2
LINC00545-201ENST00000440633 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
LINC00545-201ENST00000440633 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
LINC00545-201ENST00000440633 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
LINC00545-201ENST00000440633 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
LINC00545-201ENST00000440633 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
LINC00545-201ENST00000440633 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
LINC00545-201ENST00000440633 SYNMO15061 1565 aa16.24■□□□□ 0.19
LINC00545-201ENST00000440633 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
LINC00545-201ENST00000440633 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms